RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 KIAA1211Q6ZU35 1233 aa12.22□□□□□ -0.45
HMGA1P6-201ENST00000418454 MASTLQ96GX5 879 aa12.22□□□□□ -0.45
HMGA1P6-201ENST00000418454 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.22□□□□□ -0.45
HMGA1P6-201ENST00000418454 TSHZ3Q63HK5 1081 aa12.21□□□□□ -0.45
HMGA1P6-201ENST00000418454 FBXO33Q7Z6M2 555 aa12.21□□□□□ -0.45
HMGA1P6-201ENST00000418454 FSD1Q9BTV5 496 aa12.21□□□□□ -0.45
HMGA1P6-201ENST00000418454 TMX4Q9H1E5 349 aaPredicted RBP12.21□□□□□ -0.45
HMGA1P6-201ENST00000418454 ANO8Q9HCE9 1232 aaPredicted RBP12.21□□□□□ -0.45
HMGA1P6-201ENST00000418454 UBE3CQ15386 1083 aa12.2□□□□□ -0.46
HMGA1P6-201ENST00000418454 MCMDC2Q4G0Z9 681 aa12.2□□□□□ -0.46
HMGA1P6-201ENST00000418454 CNKSR1Q969H4 720 aa12.2□□□□□ -0.46
HMGA1P6-201ENST00000418454 IPO9Q96P70 1041 aaKnown RBP12.2□□□□□ -0.46
HMGA1P6-201ENST00000418454 DENND2AQ9ULE3 1009 aa12.2□□□□□ -0.46
HMGA1P6-201ENST00000418454 ATP6V0A2Q9Y487 856 aa12.2□□□□□ -0.46
HMGA1P6-201ENST00000418454 H0YIN7 160 aa12.19□□□□□ -0.46
HMGA1P6-201ENST00000418454 RNF113AO15541 343 aaKnown RBP12.19□□□□□ -0.46
HMGA1P6-201ENST00000418454 BECN1Q14457 450 aa12.19□□□□□ -0.46
HMGA1P6-201ENST00000418454 DEFB132Q7Z7B7 95 aa12.19□□□□□ -0.46
HMGA1P6-201ENST00000418454 SPATA5Q8NB90 893 aa12.19□□□□□ -0.46
HMGA1P6-201ENST00000418454 KCNB2Q92953 911 aa12.19□□□□□ -0.46
HMGA1P6-201ENST00000418454 SNX21Q969T3 373 aa12.19□□□□□ -0.46
HMGA1P6-201ENST00000418454 ARAP2Q8WZ64 1704 aa12.19□□□□□ -0.46
HMGA1P6-201ENST00000418454 TAF5LO75529 589 aa12.18□□□□□ -0.46
HMGA1P6-201ENST00000418454 ADORA1P30542 326 aa12.18□□□□□ -0.46
HMGA1P6-201ENST00000418454 HIBADHP31937 336 aaKnown RBP12.18□□□□□ -0.46
HMGA1P6-201ENST00000418454 KCNJ4P48050 445 aa12.18□□□□□ -0.46
HMGA1P6-201ENST00000418454 RABEP1Q15276 862 aa12.18□□□□□ -0.46
HMGA1P6-201ENST00000418454 TSGA10IPQ3SY00 556 aa12.18□□□□□ -0.46
HMGA1P6-201ENST00000418454 ZGPATQ8N5A5 531 aaKnown RBP12.18□□□□□ -0.46
HMGA1P6-201ENST00000418454 MAP4K1Q92918 833 aa12.18□□□□□ -0.46
HMGA1P6-201ENST00000418454 FAM84BQ96KN1 310 aaPredicted RBP12.18□□□□□ -0.46
HMGA1P6-201ENST00000418454 BCL11AQ9H165 835 aa12.18□□□□□ -0.46
HMGA1P6-201ENST00000418454 SALL1Q9NSC2 1324 aa12.17□□□□□ -0.46
HMGA1P6-201ENST00000418454 IRS2Q9Y4H2 1338 aa12.17□□□□□ -0.46
HMGA1P6-201ENST00000418454 GOLIM4O00461 696 aa12.17□□□□□ -0.46
HMGA1P6-201ENST00000418454 HSPA4P34932 840 aa12.17□□□□□ -0.46
HMGA1P6-201ENST00000418454 MCAMP43121 646 aa12.17□□□□□ -0.46
HMGA1P6-201ENST00000418454 TGFB2P61812 414 aa12.17□□□□□ -0.46
HMGA1P6-201ENST00000418454 FKBP4Q02790 459 aaKnown RBP eCLIP12.17□□□□□ -0.46
HMGA1P6-201ENST00000418454 MAP3K12Q12852 859 aa12.17□□□□□ -0.46
HMGA1P6-201ENST00000418454 ZMYM1Q5SVZ6 1142 aa12.17□□□□□ -0.46
HMGA1P6-201ENST00000418454 CWC27Q6UX04 472 aaKnown RBP12.17□□□□□ -0.46
HMGA1P6-201ENST00000418454 VPS37DQ86XT2 251 aa12.17□□□□□ -0.46
HMGA1P6-201ENST00000418454 HELBQ8NG08 1087 aaPredicted RBP12.17□□□□□ -0.46
HMGA1P6-201ENST00000418454 UPF1Q92900 1129 aaKnown RBP eCLIP12.17□□□□□ -0.46
HMGA1P6-201ENST00000418454 DNAJC2Q99543 621 aaKnown RBP12.17□□□□□ -0.46
HMGA1P6-201ENST00000418454 LSG1Q9H089 658 aaKnown RBP12.17□□□□□ -0.46
HMGA1P6-201ENST00000418454 VPS33BQ9H267 617 aa12.17□□□□□ -0.46
HMGA1P6-201ENST00000418454 HMG20BQ9P0W2 317 aa12.17□□□□□ -0.46
HMGA1P6-201ENST00000418454 RPAP1Q9BWH6 1393 aaPredicted RBP12.17□□□□□ -0.46
HMGA1P6-201ENST00000418454 MAP4K4O95819 1239 aaPredicted RBP12.16□□□□□ -0.46
HMGA1P6-201ENST00000418454 CYP2E1P05181 493 aaPredicted RBP12.16□□□□□ -0.46
HMGA1P6-201ENST00000418454 ZAP70P43403 619 aa12.16□□□□□ -0.46
HMGA1P6-201ENST00000418454 PHKA1P46020 1223 aa12.16□□□□□ -0.46
HMGA1P6-201ENST00000418454 MCM2P49736 904 aa12.16□□□□□ -0.46
HMGA1P6-201ENST00000418454 RNF20Q5VTR2 975 aa12.16□□□□□ -0.46
HMGA1P6-201ENST00000418454 SPTY2D1Q68D10 685 aaPredicted RBP12.16□□□□□ -0.46
HMGA1P6-201ENST00000418454 CERS3Q8IU89 383 aa12.16□□□□□ -0.46
HMGA1P6-201ENST00000418454 APPBP2Q92624 585 aa12.16□□□□□ -0.46
HMGA1P6-201ENST00000418454 DSCC1Q9BVC3 393 aa12.16□□□□□ -0.46
HMGA1P6-201ENST00000418454 TM6SF1Q9BZW5 370 aa12.16□□□□□ -0.46
HMGA1P6-201ENST00000418454 MTFR1LQ9H019 292 aa12.16□□□□□ -0.46
HMGA1P6-201ENST00000418454 ANO2Q9NQ90 1003 aa12.16□□□□□ -0.46
HMGA1P6-201ENST00000418454 ANKIB1Q9P2G1 1089 aa12.16□□□□□ -0.46
HMGA1P6-201ENST00000418454 GGA1Q9UJY5 639 aa12.16□□□□□ -0.46
HMGA1P6-201ENST00000418454 MED23Q9ULK4 1368 aa12.16□□□□□ -0.46
HMGA1P6-201ENST00000418454 EP400Q96L91 3159 aa12.16□□□□□ -0.46
HMGA1P6-201ENST00000418454 PPEF1O14829 653 aaPredicted RBP12.15□□□□□ -0.46
HMGA1P6-201ENST00000418454 ADD2P35612 726 aa12.15□□□□□ -0.46
HMGA1P6-201ENST00000418454 NMIQ13287 307 aaPredicted RBP12.15□□□□□ -0.46
HMGA1P6-201ENST00000418454 ZNF804AQ7Z570 1209 aa12.15□□□□□ -0.46
HMGA1P6-201ENST00000418454 WDR66Q8TBY9 1149 aa12.15□□□□□ -0.46
HMGA1P6-201ENST00000418454 EYA3Q99504 573 aa12.15□□□□□ -0.46
HMGA1P6-201ENST00000418454 SUGT1Q9Y2Z0 365 aa12.15□□□□□ -0.46
HMGA1P6-201ENST00000418454 U3KPZ7 1027 aaPredicted RBP12.15□□□□□ -0.46
HMGA1P6-201ENST00000418454 TNRC6CQ9HCJ0 1690 aaKnown RBP12.15□□□□□ -0.46
HMGA1P6-201ENST00000418454 IL1R1P14778 569 aa12.14□□□□□ -0.47
HMGA1P6-201ENST00000418454 ZKSCAN1P17029 563 aaPredicted RBP12.14□□□□□ -0.47
HMGA1P6-201ENST00000418454 GNAT2P19087 354 aa12.14□□□□□ -0.47
HMGA1P6-201ENST00000418454 POLD1P28340 1107 aa12.14□□□□□ -0.47
HMGA1P6-201ENST00000418454 BCAMP50895 628 aa12.14□□□□□ -0.47
HMGA1P6-201ENST00000418454 RASGRF1Q13972 1273 aa12.14□□□□□ -0.47
HMGA1P6-201ENST00000418454 KRT32Q14532 448 aa12.14□□□□□ -0.47
HMGA1P6-201ENST00000418454 NECTIN1Q15223 517 aa12.14□□□□□ -0.47
HMGA1P6-201ENST00000418454 WASHC4Q2M389 1173 aa12.14□□□□□ -0.47
HMGA1P6-201ENST00000418454 SOGA3Q5TF21 947 aa12.14□□□□□ -0.47
HMGA1P6-201ENST00000418454 C2CD5Q86YS7 1000 aa12.14□□□□□ -0.47
HMGA1P6-201ENST00000418454 SUPT20HQ8NEM7 779 aa12.14□□□□□ -0.47
HMGA1P6-201ENST00000418454 TDRD7Q8NHU6 1098 aaKnown RBP12.14□□□□□ -0.47
HMGA1P6-201ENST00000418454 KIF2CQ99661 725 aa12.14□□□□□ -0.47
HMGA1P6-201ENST00000418454 RTFDC1Q9BY42 306 aaPredicted RBP12.14□□□□□ -0.47
HMGA1P6-201ENST00000418454 CTNNA3Q9UI47 895 aa12.14□□□□□ -0.47
HMGA1P6-201ENST00000418454 CCDC171Q6TFL3 1326 aa12.13□□□□□ -0.47
HMGA1P6-201ENST00000418454 C10orf71Q711Q0 1435 aa12.13□□□□□ -0.47
HMGA1P6-201ENST00000418454 NT5C2P49902 561 aa12.13□□□□□ -0.47
HMGA1P6-201ENST00000418454 GPSM2P81274 684 aa12.13□□□□□ -0.47
HMGA1P6-201ENST00000418454 SCARF1Q14162 830 aa12.13□□□□□ -0.47
HMGA1P6-201ENST00000418454 CCDC24Q8N4L8 307 aa12.13□□□□□ -0.47
HMGA1P6-201ENST00000418454 MPNDQ8N594 471 aa12.13□□□□□ -0.47
HMGA1P6-201ENST00000418454 TBC1D16Q8TBP0 767 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms