RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 ANO2Q9NQ90 1003 aa25.13■■□□□ 1.61
CASC3-203ENST00000418132 SNRKQ9NRH2 765 aa25.13■■□□□ 1.61
CASC3-203ENST00000418132 RAD50Q92878 1312 aa25.13■■□□□ 1.61
CASC3-203ENST00000418132 PDE6BP35913 854 aa25.13■■□□□ 1.61
CASC3-203ENST00000418132 ZAP70P43403 619 aa25.13■■□□□ 1.61
CASC3-203ENST00000418132 NMIQ13287 307 aaPredicted RBP25.13■■□□□ 1.61
CASC3-203ENST00000418132 ANTXR1Q9H6X2 564 aa25.13■■□□□ 1.61
CASC3-203ENST00000418132 BBOX1O75936 387 aa25.12■■□□□ 1.61
CASC3-203ENST00000418132 FAM227BQ96M60 508 aa25.12■■□□□ 1.61
CASC3-203ENST00000418132 PDGFDQ9GZP0 370 aaPredicted RBP25.12■■□□□ 1.61
CASC3-203ENST00000418132 WTIPA6NIX2 430 aaPredicted RBP25.11■■□□□ 1.61
CASC3-203ENST00000418132 SRGNP10124 158 aa25.11■■□□□ 1.61
CASC3-203ENST00000418132 PI16Q6UXB8 463 aa25.11■■□□□ 1.61
CASC3-203ENST00000418132 ZNF804BA4D1E1 1349 aa25.11■■□□□ 1.61
CASC3-203ENST00000418132 BCAMP50895 628 aa25.11■■□□□ 1.61
CASC3-203ENST00000418132 SLC16A10Q8TF71 515 aa25.11■■□□□ 1.61
CASC3-203ENST00000418132 A0A0D9SFI3 127 aa25.1■■□□□ 1.61
CASC3-203ENST00000418132 KIF2CQ99661 725 aa25.1■■□□□ 1.61
CASC3-203ENST00000418132 COL11A2P13942 1736 aaPredicted RBP25.09■■□□□ 1.61
CASC3-203ENST00000418132 HMG20BQ9P0W2 317 aa25.09■■□□□ 1.61
CASC3-203ENST00000418132 NPR1P16066 1061 aa25.09■■□□□ 1.61
CASC3-203ENST00000418132 KCNJ4P48050 445 aa25.09■■□□□ 1.61
CASC3-203ENST00000418132 TMC4Q7Z404 712 aa25.09■■□□□ 1.61
CASC3-203ENST00000418132 LSG1Q9H089 658 aaKnown RBP25.09■■□□□ 1.61
CASC3-203ENST00000418132 MED23Q9ULK4 1368 aa25.08■■□□□ 1.61
CASC3-203ENST00000418132 RASGRF1Q13972 1273 aa25.08■■□□□ 1.61
CASC3-203ENST00000418132 TTF1Q15361 905 aaPredicted RBP25.08■■□□□ 1.61
CASC3-203ENST00000418132 XDHP47989 1333 aa25.08■■□□□ 1.61
CASC3-203ENST00000418132 CYP2E1P05181 493 aaPredicted RBP25.07■■□□□ 1.6
CASC3-203ENST00000418132 CAVIN4Q5BKX8 364 aa25.07■■□□□ 1.6
CASC3-203ENST00000418132 KIAA1211Q6ZU35 1233 aa25.07■■□□□ 1.6
CASC3-203ENST00000418132 SPATA5Q8NB90 893 aa25.07■■□□□ 1.6
CASC3-203ENST00000418132 LEMD3Q9Y2U8 911 aa25.07■■□□□ 1.6
CASC3-203ENST00000418132 LRRC37AA6NMS7 1700 aa25.07■■□□□ 1.6
CASC3-203ENST00000418132 LRRFIP1Q32MZ4 808 aaKnown RBP25.07■■□□□ 1.6
CASC3-203ENST00000418132 FAM84BQ96KN1 310 aaPredicted RBP25.07■■□□□ 1.6
CASC3-203ENST00000418132 GYG1P46976 350 aa25.06■■□□□ 1.6
CASC3-203ENST00000418132 SLC51AQ86UW1 340 aa25.06■■□□□ 1.6
CASC3-203ENST00000418132 IRS2Q9Y4H2 1338 aa25.06■■□□□ 1.6
CASC3-203ENST00000418132 RNF113AO15541 343 aaKnown RBP25.05■■□□□ 1.6
CASC3-203ENST00000418132 CHGBP05060 677 aa25.05■■□□□ 1.6
CASC3-203ENST00000418132 FBXO33Q7Z6M2 555 aa25.05■■□□□ 1.6
CASC3-203ENST00000418132 MASTLQ96GX5 879 aa25.05■■□□□ 1.6
CASC3-203ENST00000418132 ANKIB1Q9P2G1 1089 aa25.05■■□□□ 1.6
CASC3-203ENST00000418132 ZFYP08048 801 aaPredicted RBP25.05■■□□□ 1.6
CASC3-203ENST00000418132 GNL3LQ9NVN8 582 aaKnown RBP25.05■■□□□ 1.6
CASC3-203ENST00000418132 MYH7P12883 1935 aa25.05■■□□□ 1.6
CASC3-203ENST00000418132 KLRK1P26718 216 aa25.04■■□□□ 1.6
CASC3-203ENST00000418132 ALDH1B1P30837 517 aa25.04■■□□□ 1.6
CASC3-203ENST00000418132 ZMYM1Q5SVZ6 1142 aa25.04■■□□□ 1.6
CASC3-203ENST00000418132 HELLSQ9NRZ9 838 aa25.04■■□□□ 1.6
CASC3-203ENST00000418132 PPEF1O14829 653 aaPredicted RBP25.04■■□□□ 1.6
CASC3-203ENST00000418132 ZBTB22O15209 634 aa25.04■■□□□ 1.6
CASC3-203ENST00000418132 MCCP23508 829 aa25.04■■□□□ 1.6
CASC3-203ENST00000418132 GPSM2P81274 684 aa25.04■■□□□ 1.6
CASC3-203ENST00000418132 MCMDC2Q4G0Z9 681 aa25.04■■□□□ 1.6
CASC3-203ENST00000418132 PIH1D3Q9NQM4 214 aaKnown RBP25.04■■□□□ 1.6
CASC3-203ENST00000418132 CCDC171Q6TFL3 1326 aa25.03■■□□□ 1.6
CASC3-203ENST00000418132 DOCK2Q92608 1830 aa25.03■■□□□ 1.6
CASC3-203ENST00000418132 ZNF589Q86UQ0 364 aaPredicted RBP25.03■■□□□ 1.6
CASC3-203ENST00000418132 SP8Q8IXZ3 490 aa25.03■■□□□ 1.6
CASC3-203ENST00000418132 UPF1Q92900 1129 aaKnown RBP eCLIP25.03■■□□□ 1.6
CASC3-203ENST00000418132 PODXL2Q9NZ53 605 aa25.03■■□□□ 1.6
CASC3-203ENST00000418132 HSPA4P34932 840 aa25.02■■□□□ 1.6
CASC3-203ENST00000418132 PTH1RQ03431 593 aa25.02■■□□□ 1.6
CASC3-203ENST00000418132 VPS37DQ86XT2 251 aa25.02■■□□□ 1.6
CASC3-203ENST00000418132 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.02■■□□□ 1.64e-7■■□□□ 14
CASC3-203ENST00000418132 MYO5AQ9Y4I1 1855 aaKnown RBP25.02■■□□□ 1.6
CASC3-203ENST00000418132 LTBP1Q14766 1721 aa25.02■■□□□ 1.6
CASC3-203ENST00000418132 C15orf52Q6ZUT6 534 aaKnown RBP25.02■■□□□ 1.6
CASC3-203ENST00000418132 IL17RAQ96F46 866 aa25.02■■□□□ 1.6
CASC3-203ENST00000418132 SEC62Q99442 399 aaKnown RBP25.02■■□□□ 1.6
CASC3-203ENST00000418132 ATP6V0A2Q9Y487 856 aa25.02■■□□□ 1.6
CASC3-203ENST00000418132 SEMA3EO15041 775 aa25.01■■□□□ 1.59
CASC3-203ENST00000418132 ATP2B4P23634 1241 aa25.01■■□□□ 1.59
CASC3-203ENST00000418132 HIBADHP31937 336 aaKnown RBP25.01■■□□□ 1.59
CASC3-203ENST00000418132 ANAPC15P60006 121 aa25.01■■□□□ 1.59
CASC3-203ENST00000418132 C2CD5Q86YS7 1000 aa25.01■■□□□ 1.59
CASC3-203ENST00000418132 NSFL1CQ9UNZ2 370 aaKnown RBP25.01■■□□□ 1.59
CASC3-203ENST00000418132 H0YIN7 160 aa25■■□□□ 1.59
CASC3-203ENST00000418132 SLFNL1Q499Z3 407 aa25■■□□□ 1.59
CASC3-203ENST00000418132 STYK1Q6J9G0 422 aa25■■□□□ 1.59
CASC3-203ENST00000418132 ZSCAN25Q6NSZ9 544 aa25■■□□□ 1.59
CASC3-203ENST00000418132 TXNRD3Q86VQ6 643 aa25■■□□□ 1.59
CASC3-203ENST00000418132 MAP4K1Q92918 833 aa25■■□□□ 1.59
CASC3-203ENST00000418132 COL1A1P02452 1464 aaPredicted RBP24.99■■□□□ 1.59
CASC3-203ENST00000418132 C10orf71Q711Q0 1435 aa24.99■■□□□ 1.59
CASC3-203ENST00000418132 PDS5AQ29RF7 1337 aaKnown RBP24.99■■□□□ 1.59
CASC3-203ENST00000418132 GGA1Q9UJY5 639 aa24.99■■□□□ 1.59
CASC3-203ENST00000418132 DENND2AQ9ULE3 1009 aa24.99■■□□□ 1.59
CASC3-203ENST00000418132 PALD1Q9ULE6 856 aa24.99■■□□□ 1.59
CASC3-203ENST00000418132 IQSEC3Q9UPP2 1182 aaPredicted RBP24.99■■□□□ 1.59
CASC3-203ENST00000418132 ADD2P35612 726 aa24.98■■□□□ 1.59
CASC3-203ENST00000418132 RABEP1Q15276 862 aa24.98■■□□□ 1.59
CASC3-203ENST00000418132 APPBP2Q92624 585 aa24.98■■□□□ 1.59
CASC3-203ENST00000418132 MAST3O60307 1309 aa24.98■■□□□ 1.59
CASC3-203ENST00000418132 IDH1O75874 414 aaKnown RBP24.98■■□□□ 1.59
CASC3-203ENST00000418132 OSBP2Q969R2 916 aa24.98■■□□□ 1.59
CASC3-203ENST00000418132 MYH13Q9UKX3 1938 aa24.97■■□□□ 1.59
CASC3-203ENST00000418132 UFL1O94874 794 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms