RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 DUOX1Q9NRD9 1551 aa16.32■□□□□ 0.2
HLA-DMB-258ENST00000418107 CA12O43570 354 aa16.31■□□□□ 0.2
HLA-DMB-258ENST00000418107 MICALL2Q8IY33 904 aa16.31■□□□□ 0.2
HLA-DMB-258ENST00000418107 NEURL1BA8MQ27 555 aa16.3■□□□□ 0.2
HLA-DMB-258ENST00000418107 H7C1D1 291 aa16.3■□□□□ 0.2
HLA-DMB-258ENST00000418107 GRM8O00222 908 aa16.3■□□□□ 0.2
HLA-DMB-258ENST00000418107 NBPF7P0C2Y1 421 aaPredicted RBP16.3■□□□□ 0.2
HLA-DMB-258ENST00000418107 ATP8B2P98198 1209 aa16.3■□□□□ 0.2
HLA-DMB-258ENST00000418107 MLLT1Q03111 559 aaPredicted RBP16.3■□□□□ 0.2
HLA-DMB-258ENST00000418107 DLK2Q6UY11 383 aa16.3■□□□□ 0.2
HLA-DMB-258ENST00000418107 USP48Q86UV5 1035 aa16.3■□□□□ 0.2
HLA-DMB-258ENST00000418107 MCOLN1Q9GZU1 580 aa16.3■□□□□ 0.2
HLA-DMB-258ENST00000418107 ZBTB12Q9Y330 459 aaPredicted RBP16.3■□□□□ 0.2
HLA-DMB-258ENST00000418107 TAF1P21675 1872 aa16.3■□□□□ 0.2
HLA-DMB-258ENST00000418107 ATP5J2-PTCD1G3V325 749 aa16.29■□□□□ 0.2
HLA-DMB-258ENST00000418107 SLC34A2O95436 690 aa16.29■□□□□ 0.2
HLA-DMB-258ENST00000418107 IGKV5-2P06315 115 aa16.29■□□□□ 0.2
HLA-DMB-258ENST00000418107 ZIC5Q96T25 663 aa16.29■□□□□ 0.2
HLA-DMB-258ENST00000418107 BCL11AQ9H165 835 aa16.29■□□□□ 0.2
HLA-DMB-258ENST00000418107 DCTPP1Q9H773 170 aa16.29■□□□□ 0.2
HLA-DMB-258ENST00000418107 PSMD14O00487 310 aa16.28■□□□□ 0.2
HLA-DMB-258ENST00000418107 RGS19P49795 217 aa16.28■□□□□ 0.2
HLA-DMB-258ENST00000418107 HUNKP57058 714 aa16.28■□□□□ 0.2
HLA-DMB-258ENST00000418107 NUCB1Q02818 461 aa16.28■□□□□ 0.2
HLA-DMB-258ENST00000418107 GCKRQ14397 625 aa16.28■□□□□ 0.2
HLA-DMB-258ENST00000418107 SAMD7Q7Z3H4 446 aa16.28■□□□□ 0.2
HLA-DMB-258ENST00000418107 TMC4Q7Z404 712 aa16.28■□□□□ 0.2
HLA-DMB-258ENST00000418107 DBNDD1Q9H9R9 158 aa16.28■□□□□ 0.2
HLA-DMB-258ENST00000418107 TSHZ2Q9NRE2 1034 aa16.28■□□□□ 0.2
HLA-DMB-258ENST00000418107 LRRC37AA6NMS7 1700 aa16.28■□□□□ 0.2
HLA-DMB-258ENST00000418107 APBB1O00213 710 aa16.27■□□□□ 0.2
HLA-DMB-258ENST00000418107 RIMBP2O15034 1052 aa16.27■□□□□ 0.2
HLA-DMB-258ENST00000418107 WASHC4Q2M389 1173 aa16.27■□□□□ 0.2
HLA-DMB-258ENST00000418107 TBC1D10BQ4KMP7 808 aaPredicted RBP16.27■□□□□ 0.2
HLA-DMB-258ENST00000418107 CHD1LQ86WJ1 897 aa16.27■□□□□ 0.2
HLA-DMB-258ENST00000418107 CELF1Q92879 486 aaKnown RBP16.27■□□□□ 0.2
HLA-DMB-258ENST00000418107 LNPKQ9C0E8 428 aa16.27■□□□□ 0.2
HLA-DMB-258ENST00000418107 NSFL1CQ9UNZ2 370 aaKnown RBP16.27■□□□□ 0.2
HLA-DMB-258ENST00000418107 CASP8AP2Q9UKL3 1982 aa16.27■□□□□ 0.2
HLA-DMB-258ENST00000418107 EGFRP00533 1210 aa16.26■□□□□ 0.19
HLA-DMB-258ENST00000418107 NOGQ13253 232 aa16.26■□□□□ 0.19
HLA-DMB-258ENST00000418107 DGKZQ13574 1117 aa16.26■□□□□ 0.19
HLA-DMB-258ENST00000418107 DPF2Q92785 391 aa16.26■□□□□ 0.19
HLA-DMB-258ENST00000418107 FAM89AQ96GI7 184 aa16.26■□□□□ 0.19
HLA-DMB-258ENST00000418107 CWC25Q9NXE8 425 aaPredicted RBP16.26■□□□□ 0.19
HLA-DMB-258ENST00000418107 DDX60Q8IY21 1712 aaKnown RBP16.26■□□□□ 0.19
HLA-DMB-258ENST00000418107 COL4A1P02462 1669 aa16.26■□□□□ 0.19
HLA-DMB-258ENST00000418107 C6orf229H3BNL8 230 aa16.26■□□□□ 0.19
HLA-DMB-258ENST00000418107 SRGAP3O43295 1099 aa16.26■□□□□ 0.19
HLA-DMB-258ENST00000418107 KRT26Q7Z3Y9 468 aa16.26■□□□□ 0.19
HLA-DMB-258ENST00000418107 POLLQ9UGP5 575 aa16.26■□□□□ 0.19
HLA-DMB-258ENST00000418107 PNMA6EA0A0J9YXQ4 647 aa16.25■□□□□ 0.19
HLA-DMB-258ENST00000418107 ADM5C9JUS6 153 aa16.25■□□□□ 0.19
HLA-DMB-258ENST00000418107 GPSM2P81274 684 aa16.25■□□□□ 0.19
HLA-DMB-258ENST00000418107 SF3B3Q15393 1217 aaKnown RBP16.25■□□□□ 0.19
HLA-DMB-258ENST00000418107 DOK7Q18PE1 504 aa16.25■□□□□ 0.19
HLA-DMB-258ENST00000418107 RTL5Q5HYW3 569 aaPredicted RBP16.25■□□□□ 0.19
HLA-DMB-258ENST00000418107 RBM26Q5T8P6 1007 aaKnown RBP16.25■□□□□ 0.19
HLA-DMB-258ENST00000418107 ISCA1Q9BUE6 129 aa16.25■□□□□ 0.19
HLA-DMB-258ENST00000418107 KCNQ5Q9NR82 932 aa16.25■□□□□ 0.19
HLA-DMB-258ENST00000418107 RTL9Q8NET4 1388 aa16.24■□□□□ 0.19
HLA-DMB-258ENST00000418107 UTYO14607 1347 aa16.24■□□□□ 0.19
HLA-DMB-258ENST00000418107 ECE2O60344 883 aa16.24■□□□□ 0.19
HLA-DMB-258ENST00000418107 UBE3BQ7Z3V4 1068 aa16.24■□□□□ 0.19
HLA-DMB-258ENST00000418107 CCDC191Q8NCU4 936 aa16.24■□□□□ 0.19
HLA-DMB-258ENST00000418107 JARID2Q92833 1246 aaPredicted RBP16.24■□□□□ 0.19
HLA-DMB-258ENST00000418107 SUCLG2Q96I99 432 aa16.24■□□□□ 0.19
HLA-DMB-258ENST00000418107 GBA2Q9HCG7 927 aaPredicted RBP16.24■□□□□ 0.19
HLA-DMB-258ENST00000418107 FAM155AB1AL88 458 aaPredicted RBP16.23■□□□□ 0.19
HLA-DMB-258ENST00000418107 RPS12P25398 132 aaKnown RBP16.23■□□□□ 0.19
HLA-DMB-258ENST00000418107 OS9Q13438 667 aaPredicted RBP16.23■□□□□ 0.19
HLA-DMB-258ENST00000418107 RGMBQ6NW40 437 aa16.23■□□□□ 0.19
HLA-DMB-258ENST00000418107 SSH3Q8TE77 659 aa16.23■□□□□ 0.19
HLA-DMB-258ENST00000418107 DCPSQ96C86 337 aaKnown RBP16.23■□□□□ 0.19
HLA-DMB-258ENST00000418107 EXOC6BQ9Y2D4 811 aa16.23■□□□□ 0.19
HLA-DMB-258ENST00000418107 PDE4AP27815 886 aa16.22■□□□□ 0.19
HLA-DMB-258ENST00000418107 C2orf69Q8N8R5 385 aa16.22■□□□□ 0.19
HLA-DMB-258ENST00000418107 EYA3Q99504 573 aa16.22■□□□□ 0.19
HLA-DMB-258ENST00000418107 BICC1Q9H694 974 aaKnown RBP16.22■□□□□ 0.19
HLA-DMB-258ENST00000418107 IRS4O14654 1257 aaPredicted RBP16.21■□□□□ 0.19
HLA-DMB-258ENST00000418107 SURF6O75683 361 aaKnown RBP16.21■□□□□ 0.19
HLA-DMB-258ENST00000418107 POLA2Q14181 598 aa16.21■□□□□ 0.19
HLA-DMB-258ENST00000418107 KIF4BQ2VIQ3 1234 aa16.21■□□□□ 0.19
HLA-DMB-258ENST00000418107 HSP90AB4PQ58FF6 505 aa16.21■□□□□ 0.19
HLA-DMB-258ENST00000418107 TBC1D16Q8TBP0 767 aa16.21■□□□□ 0.19
HLA-DMB-258ENST00000418107 SMARCA5O60264 1052 aaPredicted RBP16.2■□□□□ 0.18
HLA-DMB-258ENST00000418107 RAB11FIP3O75154 756 aa16.2■□□□□ 0.18
HLA-DMB-258ENST00000418107 ZNF157P51786 506 aaPredicted RBP16.2■□□□□ 0.18
HLA-DMB-258ENST00000418107 RPS8P62241 208 aaKnown RBP16.2■□□□□ 0.18
HLA-DMB-258ENST00000418107 KIF23Q02241 960 aaPredicted RBP16.2■□□□□ 0.18
HLA-DMB-258ENST00000418107 LRRCC1Q9C099 1032 aa16.2■□□□□ 0.18
HLA-DMB-258ENST00000418107 GGA3Q9NZ52 723 aa16.2■□□□□ 0.18
HLA-DMB-258ENST00000418107 ASTN2O75129 1339 aaPredicted RBP16.19■□□□□ 0.18
HLA-DMB-258ENST00000418107 H7C1W4 665 aa16.19■□□□□ 0.18
HLA-DMB-258ENST00000418107 CCDC102AQ96A19 550 aa16.19■□□□□ 0.18
HLA-DMB-258ENST00000418107 CHMP3Q9Y3E7 222 aa16.19■□□□□ 0.18
HLA-DMB-258ENST00000418107 POLR2AP24928 1970 aaKnown RBP16.19■□□□□ 0.18
HLA-DMB-258ENST00000418107 VIL1P09327 827 aaKnown RBP16.18■□□□□ 0.18
HLA-DMB-258ENST00000418107 TRIM28Q13263 835 aaKnown RBP16.18■□□□□ 0.18
HLA-DMB-258ENST00000418107 MTX1Q13505 466 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms