RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 COPRSQ9NQ92 184 aa15.54■□□□□ 0.08
SKA1-203ENST00000417656 ARAP2Q8WZ64 1704 aa15.54■□□□□ 0.08
SKA1-203ENST00000417656 IRS2Q9Y4H2 1338 aa15.53■□□□□ 0.08
SKA1-203ENST00000417656 DPY19L2Q6NUT2 758 aa15.53■□□□□ 0.08
SKA1-203ENST00000417656 CEP85Q6P2H3 762 aa15.53■□□□□ 0.08
SKA1-203ENST00000417656 ATG9AQ7Z3C6 839 aa15.53■□□□□ 0.08
SKA1-203ENST00000417656 TXNRD3Q86VQ6 643 aa15.53■□□□□ 0.08
SKA1-203ENST00000417656 VGLL2Q8N8G2 317 aa15.53■□□□□ 0.08
SKA1-203ENST00000417656 ZBTB40Q9NUA8 1239 aa15.53■□□□□ 0.08
SKA1-203ENST00000417656 G3V3G9 751 aa15.52■□□□□ 0.08
SKA1-203ENST00000417656 RAD17O75943 681 aa15.52■□□□□ 0.08
SKA1-203ENST00000417656 CIAO1O76071 339 aa15.52■□□□□ 0.08
SKA1-203ENST00000417656 CXCL9Q07325 125 aa15.52■□□□□ 0.08
SKA1-203ENST00000417656 DCAF8Q5TAQ9 597 aa15.52■□□□□ 0.08
SKA1-203ENST00000417656 FBXO3Q9UK99 471 aa15.52■□□□□ 0.08
SKA1-203ENST00000417656 GJA3Q9Y6H8 435 aa15.52■□□□□ 0.08
SKA1-203ENST00000417656 SCN4AP35499 1836 aa15.52■□□□□ 0.07
SKA1-203ENST00000417656 ATP8B2P98198 1209 aa15.51■□□□□ 0.07
SKA1-203ENST00000417656 GPC2Q8N158 579 aa15.51■□□□□ 0.07
SKA1-203ENST00000417656 SSH3Q8TE77 659 aa15.51■□□□□ 0.07
SKA1-203ENST00000417656 PDE8BO95263 885 aa15.5■□□□□ 0.07
SKA1-203ENST00000417656 IL15P40933 162 aaPredicted RBP15.5■□□□□ 0.07
SKA1-203ENST00000417656 UBE4AQ14139 1066 aa15.5■□□□□ 0.07
SKA1-203ENST00000417656 CIAPIN1Q6FI81 312 aa15.5■□□□□ 0.07
SKA1-203ENST00000417656 C15orf52Q6ZUT6 534 aaKnown RBP15.5■□□□□ 0.07
SKA1-203ENST00000417656 CHMP4BQ9H444 224 aaKnown RBP15.5■□□□□ 0.07
SKA1-203ENST00000417656 KCNQ5Q9NR82 932 aa15.5■□□□□ 0.07
SKA1-203ENST00000417656 KIF3CO14782 793 aa15.49■□□□□ 0.07
SKA1-203ENST00000417656 PUM3Q15397 648 aaKnown RBP15.49■□□□□ 0.07
SKA1-203ENST00000417656 L3MBTL3Q96JM7 780 aaPredicted RBP15.49■□□□□ 0.07
SKA1-203ENST00000417656 CRBNQ96SW2 442 aa15.49■□□□□ 0.07
SKA1-203ENST00000417656 COA1Q9GZY4 146 aa15.49■□□□□ 0.07
SKA1-203ENST00000417656 RRAGCQ9HB90 399 aa15.49■□□□□ 0.07
SKA1-203ENST00000417656 ZNF609O15014 1411 aa15.49■□□□□ 0.07
SKA1-203ENST00000417656 MYH13Q9UKX3 1938 aa15.49■□□□□ 0.07
SKA1-203ENST00000417656 PSMD14O00487 310 aa15.48■□□□□ 0.07
SKA1-203ENST00000417656 GYG1P46976 350 aa15.48■□□□□ 0.07
SKA1-203ENST00000417656 ZNF804AQ7Z570 1209 aa15.48■□□□□ 0.07
SKA1-203ENST00000417656 CEP126Q9P2H0 1117 aa15.48■□□□□ 0.07
SKA1-203ENST00000417656 SUPT16HQ9Y5B9 1047 aaKnown RBP15.48■□□□□ 0.07
SKA1-203ENST00000417656 POTECB2RU33 542 aa15.47■□□□□ 0.07
SKA1-203ENST00000417656 FGFR2P21802 821 aa15.47■□□□□ 0.07
SKA1-203ENST00000417656 GMPSP49915 693 aaPredicted RBP15.47■□□□□ 0.07
SKA1-203ENST00000417656 SCNN1DP51172 638 aa15.47■□□□□ 0.07
SKA1-203ENST00000417656 TNIP1Q15025 636 aa15.47■□□□□ 0.07
SKA1-203ENST00000417656 ATP2B3Q16720 1220 aa15.47■□□□□ 0.07
SKA1-203ENST00000417656 PODNQ7Z5L7 613 aa15.47■□□□□ 0.07
SKA1-203ENST00000417656 FBXW7Q969H0 707 aa15.47■□□□□ 0.07
SKA1-203ENST00000417656 CD209Q9NNX6 404 aa15.47■□□□□ 0.07
SKA1-203ENST00000417656 SURF6O75683 361 aaKnown RBP15.46■□□□□ 0.07
SKA1-203ENST00000417656 SLC5A1P13866 664 aa15.46■□□□□ 0.07
SKA1-203ENST00000417656 VEGFAP15692 232 aaPredicted RBP15.46■□□□□ 0.07
SKA1-203ENST00000417656 TFCP2Q12800 502 aa15.46■□□□□ 0.07
SKA1-203ENST00000417656 G3BP1Q13283 466 aaKnown RBP eCLIP15.46■□□□□ 0.07
SKA1-203ENST00000417656 OS9Q13438 667 aaPredicted RBP15.46■□□□□ 0.07
SKA1-203ENST00000417656 SIRT2Q8IXJ6 389 aa15.46■□□□□ 0.07
SKA1-203ENST00000417656 ZBTB12Q9Y330 459 aaPredicted RBP15.46■□□□□ 0.07
SKA1-203ENST00000417656 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.46■□□□□ 0.07
SKA1-203ENST00000417656 ADAMTSL1Q8N6G6 1762 aa15.46■□□□□ 0.07
SKA1-203ENST00000417656 IQCA1LA6NCM1 817 aa15.45■□□□□ 0.06
SKA1-203ENST00000417656 IFIT1P09914 478 aaKnown RBP15.45■□□□□ 0.06
SKA1-203ENST00000417656 LMOD1P29536 600 aaPredicted RBP15.45■□□□□ 0.06
SKA1-203ENST00000417656 RPAP2Q8IXW5 612 aaPredicted RBP15.45■□□□□ 0.06
SKA1-203ENST00000417656 LPIN2Q92539 896 aa15.45■□□□□ 0.06
SKA1-203ENST00000417656 FAM84BQ96KN1 310 aaPredicted RBP15.45■□□□□ 0.06
SKA1-203ENST00000417656 HACL1Q9UJ83 578 aa15.45■□□□□ 0.06
SKA1-203ENST00000417656 EXOC6BQ9Y2D4 811 aa15.45■□□□□ 0.06
SKA1-203ENST00000417656 SHTN1A0MZ66 631 aa15.44■□□□□ 0.06
SKA1-203ENST00000417656 USP17L3A6NCW0 530 aa15.44■□□□□ 0.06
SKA1-203ENST00000417656 USP17L4A6NCW7 530 aa15.44■□□□□ 0.06
SKA1-203ENST00000417656 HMMRO75330 724 aa15.44■□□□□ 0.06
SKA1-203ENST00000417656 SASH1O94885 1247 aa15.44■□□□□ 0.06
SKA1-203ENST00000417656 IL1R1P14778 569 aa15.44■□□□□ 0.06
SKA1-203ENST00000417656 HIBADHP31937 336 aaKnown RBP15.44■□□□□ 0.06
SKA1-203ENST00000417656 USP17L1Q7RTZ2 530 aa15.44■□□□□ 0.06
SKA1-203ENST00000417656 MXD3Q9BW11 206 aa15.44■□□□□ 0.06
SKA1-203ENST00000417656 TAF1DQ9H5J8 278 aaPredicted RBP15.44■□□□□ 0.06
SKA1-203ENST00000417656 GPRC5DQ9NZD1 345 aa15.44■□□□□ 0.06
SKA1-203ENST00000417656 JAG2Q9Y219 1238 aa15.44■□□□□ 0.06
SKA1-203ENST00000417656 NOP58Q9Y2X3 529 aaKnown RBP15.44■□□□□ 0.06
SKA1-203ENST00000417656 COL1A1P02452 1464 aaPredicted RBP15.44■□□□□ 0.06
SKA1-203ENST00000417656 VIL1P09327 827 aaKnown RBP15.43■□□□□ 0.06
SKA1-203ENST00000417656 ADORA1P30542 326 aa15.43■□□□□ 0.06
SKA1-203ENST00000417656 EPHX2P34913 555 aa15.43■□□□□ 0.06
SKA1-203ENST00000417656 EPS15P42566 896 aa15.43■□□□□ 0.06
SKA1-203ENST00000417656 GTF2IP78347 998 aa15.43■□□□□ 0.06
SKA1-203ENST00000417656 CAVIN4Q5BKX8 364 aa15.43■□□□□ 0.06
SKA1-203ENST00000417656 DACT2Q5SW24 774 aa15.43■□□□□ 0.06
SKA1-203ENST00000417656 RSBN1LQ6PCB5 846 aaPredicted RBP15.43■□□□□ 0.06
SKA1-203ENST00000417656 FBXO33Q7Z6M2 555 aa15.43■□□□□ 0.06
SKA1-203ENST00000417656 VPS37DQ86XT2 251 aa15.43■□□□□ 0.06
SKA1-203ENST00000417656 C16orf71Q8IYS4 520 aaPredicted RBP15.43■□□□□ 0.06
SKA1-203ENST00000417656 IQSEC3Q9UPP2 1182 aaPredicted RBP15.43■□□□□ 0.06
SKA1-203ENST00000417656 A0A1B0GUL7 405 aa15.42■□□□□ 0.06
SKA1-203ENST00000417656 RPS12P25398 132 aaKnown RBP15.42■□□□□ 0.06
SKA1-203ENST00000417656 BCAMP50895 628 aa15.42■□□□□ 0.06
SKA1-203ENST00000417656 STRIP1Q5VSL9 837 aa15.42■□□□□ 0.06
SKA1-203ENST00000417656 MICALL2Q8IY33 904 aa15.42■□□□□ 0.06
SKA1-203ENST00000417656 TDRD7Q8NHU6 1098 aaKnown RBP15.42■□□□□ 0.06
SKA1-203ENST00000417656 POTEIP0CG38 1075 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms