RNA–Protein interactions for RNA: ENST00000417512.1

SDCCAG3-205, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-205ENST00000417512 USP17L1Q7RTZ2 530 aa16.17■□□□□ 0.18
SDCCAG3-205ENST00000417512 PODNQ7Z5L7 613 aa16.17■□□□□ 0.18
SDCCAG3-205ENST00000417512 OGFOD1Q8N543 542 aa16.17■□□□□ 0.18
SDCCAG3-205ENST00000417512 SCAF8Q9UPN6 1271 aaKnown RBP16.17■□□□□ 0.18
SDCCAG3-205ENST00000417512 PITPNM2Q9BZ72 1349 aa16.17■□□□□ 0.18
SDCCAG3-205ENST00000417512 ANKRD36CQ5JPF3 1778 aa16.16■□□□□ 0.18
SDCCAG3-205ENST00000417512 GPR25O00155 361 aa16.16■□□□□ 0.18
SDCCAG3-205ENST00000417512 TNRC18O15417 2968 aaPredicted RBP16.15■□□□□ 0.18
SDCCAG3-205ENST00000417512 ATP2B4P23634 1241 aa16.15■□□□□ 0.18
SDCCAG3-205ENST00000417512 MKRN3Q13064 507 aaKnown RBP16.15■□□□□ 0.18
SDCCAG3-205ENST00000417512 FBXO46Q6PJ61 603 aaPredicted RBP16.15■□□□□ 0.18
SDCCAG3-205ENST00000417512 ANKRD18AQ8IVF6 992 aa16.15■□□□□ 0.18
SDCCAG3-205ENST00000417512 CCDC85AQ96PX6 553 aaPredicted RBP16.15■□□□□ 0.18
SDCCAG3-205ENST00000417512 GMLQ99445 158 aa16.15■□□□□ 0.18
SDCCAG3-205ENST00000417512 DLG5Q8TDM6 1919 aa16.15■□□□□ 0.18
SDCCAG3-205ENST00000417512 XDHP47989 1333 aa16.15■□□□□ 0.18
SDCCAG3-205ENST00000417512 PDE8AO60658 829 aa16.14■□□□□ 0.17
SDCCAG3-205ENST00000417512 SREBF2Q12772 1141 aa16.14■□□□□ 0.17
SDCCAG3-205ENST00000417512 NBPF9Q3BBW0 867 aa16.14■□□□□ 0.17
SDCCAG3-205ENST00000417512 GCC1Q96CN9 775 aa16.14■□□□□ 0.17
SDCCAG3-205ENST00000417512 FKTNO75072 461 aa16.13■□□□□ 0.17
SDCCAG3-205ENST00000417512 PDE3AQ14432 1141 aa16.13■□□□□ 0.17
SDCCAG3-205ENST00000417512 NOM1Q5C9Z4 860 aaKnown RBP16.13■□□□□ 0.17
SDCCAG3-205ENST00000417512 CCDC191Q8NCU4 936 aa16.13■□□□□ 0.17
SDCCAG3-205ENST00000417512 JARID2Q92833 1246 aaPredicted RBP16.13■□□□□ 0.17
SDCCAG3-205ENST00000417512 FBXW7Q969H0 707 aa16.13■□□□□ 0.17
SDCCAG3-205ENST00000417512 MYD88Q99836 296 aa16.13■□□□□ 0.17
SDCCAG3-205ENST00000417512 LAMB2P55268 1798 aa16.13■□□□□ 0.17
SDCCAG3-205ENST00000417512 PCCAP05165 728 aaPredicted RBP16.12■□□□□ 0.17
SDCCAG3-205ENST00000417512 PRKG1Q13976 671 aa16.12■□□□□ 0.17
SDCCAG3-205ENST00000417512 ARMC9Q7Z3E5 817 aa16.12■□□□□ 0.17
SDCCAG3-205ENST00000417512 TRIM35Q9UPQ4 493 aa16.12■□□□□ 0.17
SDCCAG3-205ENST00000417512 TAF1P21675 1872 aa16.12■□□□□ 0.17
SDCCAG3-205ENST00000417512 GNAI1P63096 354 aa16.11■□□□□ 0.17
SDCCAG3-205ENST00000417512 PHAXQ9H814 394 aaKnown RBP16.11■□□□□ 0.17
SDCCAG3-205ENST00000417512 CWC25Q9NXE8 425 aaPredicted RBP16.11■□□□□ 0.17
SDCCAG3-205ENST00000417512 KIF16BQ96L93 1317 aa16.11■□□□□ 0.17
SDCCAG3-205ENST00000417512 FANCIQ9NVI1 1328 aa16.11■□□□□ 0.17
SDCCAG3-205ENST00000417512 PDE4DIPQ5VU43 2346 aa16.11■□□□□ 0.17
SDCCAG3-205ENST00000417512 LRRC37AA6NMS7 1700 aa16.11■□□□□ 0.17
SDCCAG3-205ENST00000417512 WNT10BO00744 389 aa16.1■□□□□ 0.17
SDCCAG3-205ENST00000417512 ALDH1A1P00352 501 aa16.1■□□□□ 0.17
SDCCAG3-205ENST00000417512 PTPN12Q05209 780 aaKnown RBP16.1■□□□□ 0.17
SDCCAG3-205ENST00000417512 CDC5LQ99459 802 aaKnown RBP16.1■□□□□ 0.17
SDCCAG3-205ENST00000417512 IFT57Q9NWB7 429 aa16.1■□□□□ 0.17
SDCCAG3-205ENST00000417512 ELL2O00472 640 aaPredicted RBP16.09■□□□□ 0.17
SDCCAG3-205ENST00000417512 MMP14P50281 582 aa16.09■□□□□ 0.17
SDCCAG3-205ENST00000417512 INHBEP58166 350 aa16.09■□□□□ 0.17
SDCCAG3-205ENST00000417512 MXD3Q9BW11 206 aa16.09■□□□□ 0.17
SDCCAG3-205ENST00000417512 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.09■□□□□ 0.17
SDCCAG3-205ENST00000417512 MYO3BQ8WXR4 1341 aa16.09■□□□□ 0.17
SDCCAG3-205ENST00000417512 ZNF609O15014 1411 aa16.09■□□□□ 0.17
SDCCAG3-205ENST00000417512 POLR2AP24928 1970 aaKnown RBP16.08■□□□□ 0.16
SDCCAG3-205ENST00000417512 WTIPA6NIX2 430 aaPredicted RBP16.08■□□□□ 0.16
SDCCAG3-205ENST00000417512 DDX58O95786 925 aaKnown RBP16.08■□□□□ 0.16
SDCCAG3-205ENST00000417512 DACT2Q5SW24 774 aa16.08■□□□□ 0.16
SDCCAG3-205ENST00000417512 STRIP1Q5VSL9 837 aa16.08■□□□□ 0.16
SDCCAG3-205ENST00000417512 INTS3Q68E01 1043 aaKnown RBP16.08■□□□□ 0.16
SDCCAG3-205ENST00000417512 SLC10A4Q96EP9 437 aa16.08■□□□□ 0.16
SDCCAG3-205ENST00000417512 CFHR5Q9BXR6 569 aa16.08■□□□□ 0.16
SDCCAG3-205ENST00000417512 R3HDMLQ9H3Y0 253 aa16.08■□□□□ 0.16
SDCCAG3-205ENST00000417512 BSDC1Q9NW68 430 aaPredicted RBP16.08■□□□□ 0.16
SDCCAG3-205ENST00000417512 MINPP1Q9UNW1 487 aa16.08■□□□□ 0.16
SDCCAG3-205ENST00000417512 AKAP11Q9UKA4 1901 aa16.07■□□□□ 0.16
SDCCAG3-205ENST00000417512 SASH1O94885 1247 aa16.07■□□□□ 0.16
SDCCAG3-205ENST00000417512 SPRYD7Q5W111 196 aa16.07■□□□□ 0.16
SDCCAG3-205ENST00000417512 TTLL5Q6EMB2 1281 aa16.07■□□□□ 0.16
SDCCAG3-205ENST00000417512 B4GALNT3Q6L9W6 998 aa16.07■□□□□ 0.16
SDCCAG3-205ENST00000417512 COA1Q9GZY4 146 aa16.07■□□□□ 0.16
SDCCAG3-205ENST00000417512 MBIPQ9NS73 344 aa16.07■□□□□ 0.16
SDCCAG3-205ENST00000417512 ANGEL1Q9UNK9 670 aaKnown RBP16.07■□□□□ 0.16
SDCCAG3-205ENST00000417512 TRIM17Q9Y577 477 aa16.07■□□□□ 0.16
SDCCAG3-205ENST00000417512 PAPPA2Q9BXP8 1791 aa16.06■□□□□ 0.16
SDCCAG3-205ENST00000417512 DDX60Q8IY21 1712 aaKnown RBP16.06■□□□□ 0.16
SDCCAG3-205ENST00000417512 COL4A1P02462 1669 aa16.06■□□□□ 0.16
SDCCAG3-205ENST00000417512 CCT4P50991 539 aaKnown RBP16.06■□□□□ 0.16
SDCCAG3-205ENST00000417512 RARSP54136 660 aaKnown RBP16.06■□□□□ 0.16
SDCCAG3-205ENST00000417512 APOBEC3FQ8IUX4 373 aaKnown RBP16.06■□□□□ 0.16
SDCCAG3-205ENST00000417512 METTL22Q9BUU2 404 aaPredicted RBP16.06■□□□□ 0.16
SDCCAG3-205ENST00000417512 CHMP4AQ9BY43 222 aa16.06■□□□□ 0.16
SDCCAG3-205ENST00000417512 CHMP4BQ9H444 224 aaKnown RBP16.06■□□□□ 0.16
SDCCAG3-205ENST00000417512 SPINK5Q9NQ38 1064 aaPredicted RBP16.06■□□□□ 0.16
SDCCAG3-205ENST00000417512 MED23Q9ULK4 1368 aa16.05■□□□□ 0.16
SDCCAG3-205ENST00000417512 MANSC4A6NHS7 340 aaPredicted RBP16.05■□□□□ 0.16
SDCCAG3-205ENST00000417512 IPO8O15397 1037 aaKnown RBP16.05■□□□□ 0.16
SDCCAG3-205ENST00000417512 CTSWP56202 376 aa16.05■□□□□ 0.16
SDCCAG3-205ENST00000417512 ALDH1L2Q3SY69 923 aa16.05■□□□□ 0.16
SDCCAG3-205ENST00000417512 HABP4Q5JVS0 413 aaKnown RBP16.05■□□□□ 0.16
SDCCAG3-205ENST00000417512 LDLRAD1Q5T700 205 aa16.05■□□□□ 0.16
SDCCAG3-205ENST00000417512 KIAA0825Q8IV33 1275 aa16.05■□□□□ 0.16
SDCCAG3-205ENST00000417512 EXOC6Q8TAG9 804 aa16.05■□□□□ 0.16
SDCCAG3-205ENST00000417512 LEMD3Q9Y2U8 911 aa16.05■□□□□ 0.16
SDCCAG3-205ENST00000417512 IFNL1Q8IU54 200 aa16.04■□□□□ 0.16
SDCCAG3-205ENST00000417512 TTLL11Q8NHH1 800 aa16.04■□□□□ 0.16
SDCCAG3-205ENST00000417512 CRBNQ96SW2 442 aa16.04■□□□□ 0.16
SDCCAG3-205ENST00000417512 PPP1R12BO60237 982 aaPredicted RBP16.03■□□□□ 0.16
SDCCAG3-205ENST00000417512 IGHMBP2P38935 993 aaKnown RBP16.03■□□□□ 0.16
SDCCAG3-205ENST00000417512 CCDC30Q5VVM6 783 aa16.03■□□□□ 0.16
SDCCAG3-205ENST00000417512 OTUD7BQ6GQQ9 843 aa16.03■□□□□ 0.16
SDCCAG3-205ENST00000417512 DEFB129Q9H1M3 183 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 269.9 ms