RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 HNRNPUQ00839 825 aaKnown RBP eCLIP19.68■□□□□ 0.74
ITGB1-204ENST00000417122 FMR1Q06787 632 aaKnown RBP eCLIP19.68■□□□□ 0.74
ITGB1-204ENST00000417122 TBC1D10BQ4KMP7 808 aaPredicted RBP19.68■□□□□ 0.74
ITGB1-204ENST00000417122 HELBQ8NG08 1087 aaPredicted RBP19.68■□□□□ 0.74
ITGB1-204ENST00000417122 USP44Q9H0E7 712 aa19.68■□□□□ 0.74
ITGB1-204ENST00000417122 CNNM1Q9NRU3 951 aa19.68■□□□□ 0.74
ITGB1-204ENST00000417122 RABL6Q3YEC7 729 aaPredicted RBP19.67■□□□□ 0.74
ITGB1-204ENST00000417122 RBM26Q5T8P6 1007 aaKnown RBP19.67■□□□□ 0.74
ITGB1-204ENST00000417122 SNAP23O00161 211 aa19.66■□□□□ 0.74
ITGB1-204ENST00000417122 EGFRP00533 1210 aa19.66■□□□□ 0.74
ITGB1-204ENST00000417122 GLIS2Q9BZE0 524 aaPredicted RBP19.66■□□□□ 0.74
ITGB1-204ENST00000417122 API5Q9BZZ5 524 aaKnown RBP19.66■□□□□ 0.74
ITGB1-204ENST00000417122 ZNF646O15015 1829 aaPredicted RBP19.66■□□□□ 0.74
ITGB1-204ENST00000417122 CNTNAP1P78357 1384 aa19.66■□□□□ 0.74
ITGB1-204ENST00000417122 PLIN1O60240 522 aa19.65■□□□□ 0.74
ITGB1-204ENST00000417122 KIF4BQ2VIQ3 1234 aa19.65■□□□□ 0.74
ITGB1-204ENST00000417122 CDC37L1Q7L3B6 337 aa19.65■□□□□ 0.74
ITGB1-204ENST00000417122 ANKRD44Q8N8A2 993 aa19.65■□□□□ 0.74
ITGB1-204ENST00000417122 FBXW7Q969H0 707 aa19.65■□□□□ 0.74
ITGB1-204ENST00000417122 GMLQ99445 158 aa19.65■□□□□ 0.74
ITGB1-204ENST00000417122 USP17L8P0C7I0 530 aa19.64■□□□□ 0.73
ITGB1-204ENST00000417122 ZNF280AP59817 542 aaPredicted RBP19.64■□□□□ 0.73
ITGB1-204ENST00000417122 DACT2Q5SW24 774 aa19.64■□□□□ 0.73
ITGB1-204ENST00000417122 STRIP1Q5VSL9 837 aa19.64■□□□□ 0.73
ITGB1-204ENST00000417122 C15orf52Q6ZUT6 534 aaKnown RBP19.64■□□□□ 0.73
ITGB1-204ENST00000417122 ABT1Q9ULW3 272 aaKnown RBP19.64■□□□□ 0.73
ITGB1-204ENST00000417122 IRS2Q9Y4H2 1338 aa19.64■□□□□ 0.73
ITGB1-204ENST00000417122 POLR2AP24928 1970 aaKnown RBP19.63■□□□□ 0.73
ITGB1-204ENST00000417122 KIF16BQ96L93 1317 aa19.63■□□□□ 0.73
ITGB1-204ENST00000417122 RASSF10A6NK89 507 aa19.63■□□□□ 0.73
ITGB1-204ENST00000417122 CST9Q5W186 159 aa19.63■□□□□ 0.73
ITGB1-204ENST00000417122 TTLL5Q6EMB2 1281 aa19.63■□□□□ 0.73
ITGB1-204ENST00000417122 PUS3Q9BZE2 481 aaKnown RBP19.63■□□□□ 0.73
ITGB1-204ENST00000417122 CD209Q9NNX6 404 aa19.63■□□□□ 0.73
ITGB1-204ENST00000417122 MYO3BQ8WXR4 1341 aa19.62■□□□□ 0.73
ITGB1-204ENST00000417122 DEFB115Q30KQ5 88 aa19.62■□□□□ 0.73
ITGB1-204ENST00000417122 USP48Q86UV5 1035 aa19.62■□□□□ 0.73
ITGB1-204ENST00000417122 ARHGAP45Q92619 1136 aa19.62■□□□□ 0.73
ITGB1-204ENST00000417122 DCPSQ96C86 337 aaKnown RBP19.62■□□□□ 0.73
ITGB1-204ENST00000417122 MXD3Q9BW11 206 aa19.62■□□□□ 0.73
ITGB1-204ENST00000417122 CELF2O95319 508 aaKnown RBP19.61■□□□□ 0.73
ITGB1-204ENST00000417122 VEGFBP49765 207 aa19.61■□□□□ 0.73
ITGB1-204ENST00000417122 GTF2IP78347 998 aa19.61■□□□□ 0.73
ITGB1-204ENST00000417122 ZNF804AQ7Z570 1209 aa19.61■□□□□ 0.73
ITGB1-204ENST00000417122 MYOZ2Q9NPC6 264 aa19.61■□□□□ 0.73
ITGB1-204ENST00000417122 RIPOR2Q9Y4F9 1068 aa19.61■□□□□ 0.73
ITGB1-204ENST00000417122 MROH5Q6ZUA9 1318 aa19.6■□□□□ 0.73
ITGB1-204ENST00000417122 UBTFL1P0CB47 393 aaPredicted RBP19.6■□□□□ 0.73
ITGB1-204ENST00000417122 UBE4AQ14139 1066 aa19.6■□□□□ 0.73
ITGB1-204ENST00000417122 KRT26Q7Z3Y9 468 aa19.6■□□□□ 0.73
ITGB1-204ENST00000417122 ZNF408Q9H9D4 720 aa19.6■□□□□ 0.73
ITGB1-204ENST00000417122 SCARF1Q14162 830 aa19.59■□□□□ 0.73
ITGB1-204ENST00000417122 LRRC24Q50LG9 513 aa19.59■□□□□ 0.73
ITGB1-204ENST00000417122 OGFOD1Q8N543 542 aa19.59■□□□□ 0.73
ITGB1-204ENST00000417122 KLHDC4Q8TBB5 520 aa19.59■□□□□ 0.73
ITGB1-204ENST00000417122 GGA3Q9NZ52 723 aa19.59■□□□□ 0.73
ITGB1-204ENST00000417122 TLL2Q9Y6L7 1015 aa19.59■□□□□ 0.73
ITGB1-204ENST00000417122 ASTN2O75129 1339 aaPredicted RBP19.58■□□□□ 0.73
ITGB1-204ENST00000417122 IPO8O15397 1037 aaKnown RBP19.58■□□□□ 0.72
ITGB1-204ENST00000417122 BCAR3O75815 825 aa19.58■□□□□ 0.72
ITGB1-204ENST00000417122 IL1R1P14778 569 aa19.58■□□□□ 0.72
ITGB1-204ENST00000417122 ADM5C9JUS6 153 aa19.57■□□□□ 0.72
ITGB1-204ENST00000417122 HSPA1AP0DMV8 641 aaKnown RBP19.57■□□□□ 0.72
ITGB1-204ENST00000417122 HSPA1BP0DMV9 641 aaKnown RBP19.57■□□□□ 0.72
ITGB1-204ENST00000417122 MMP14P50281 582 aa19.57■□□□□ 0.72
ITGB1-204ENST00000417122 METTL24Q5JXM2 366 aa19.57■□□□□ 0.72
ITGB1-204ENST00000417122 ANGEL2Q5VTE6 544 aaKnown RBP19.57■□□□□ 0.72
ITGB1-204ENST00000417122 DLK2Q6UY11 383 aa19.57■□□□□ 0.72
ITGB1-204ENST00000417122 SULF1Q8IWU6 871 aa19.57■□□□□ 0.72
ITGB1-204ENST00000417122 FRAT1Q92837 279 aaPredicted RBP19.57■□□□□ 0.72
ITGB1-204ENST00000417122 HDAC5Q9UQL6 1122 aa19.57■□□□□ 0.72
ITGB1-204ENST00000417122 WDR33Q9C0J8 1336 aaKnown RBP19.56■□□□□ 0.72
ITGB1-204ENST00000417122 INTS3Q68E01 1043 aaKnown RBP19.56■□□□□ 0.72
ITGB1-204ENST00000417122 PAXIP1Q6ZW49 1069 aaPredicted RBP19.56■□□□□ 0.72
ITGB1-204ENST00000417122 KIAA0825Q8IV33 1275 aa19.56■□□□□ 0.72
ITGB1-204ENST00000417122 HDAC9Q9UKV0 1011 aa19.56■□□□□ 0.72
ITGB1-204ENST00000417122 ZBED9Q6R2W3 1325 aa19.55■□□□□ 0.72
ITGB1-204ENST00000417122 TRIM27P14373 513 aa19.55■□□□□ 0.72
ITGB1-204ENST00000417122 GYG1P46976 350 aa19.55■□□□□ 0.72
ITGB1-204ENST00000417122 RFX5P48382 616 aaPredicted RBP19.55■□□□□ 0.72
ITGB1-204ENST00000417122 ATF7IPQ6VMQ6 1270 aa19.55■□□□□ 0.72
ITGB1-204ENST00000417122 SAPCD2Q86UD0 394 aa19.55■□□□□ 0.72
ITGB1-204ENST00000417122 FAM84BQ96KN1 310 aaPredicted RBP19.55■□□□□ 0.72
ITGB1-204ENST00000417122 MEIS3Q99687 375 aa19.55■□□□□ 0.72
ITGB1-204ENST00000417122 PITPNM2Q9BZ72 1349 aa19.54■□□□□ 0.72
ITGB1-204ENST00000417122 PDE8BO95263 885 aa19.54■□□□□ 0.72
ITGB1-204ENST00000417122 HIBADHP31937 336 aaKnown RBP19.54■□□□□ 0.72
ITGB1-204ENST00000417122 ECE1P42892 770 aa19.54■□□□□ 0.72
ITGB1-204ENST00000417122 PTPN12Q05209 780 aaKnown RBP19.54■□□□□ 0.72
ITGB1-204ENST00000417122 NBPF9Q3BBW0 867 aa19.54■□□□□ 0.72
ITGB1-204ENST00000417122 VGLL2Q8N8G2 317 aa19.54■□□□□ 0.72
ITGB1-204ENST00000417122 LRRFIP2Q9Y608 721 aaKnown RBP19.54■□□□□ 0.72
ITGB1-204ENST00000417122 EYA2O00167 538 aa19.53■□□□□ 0.72
ITGB1-204ENST00000417122 WNT10BO00744 389 aa19.53■□□□□ 0.72
ITGB1-204ENST00000417122 SASH1O94885 1247 aa19.53■□□□□ 0.72
ITGB1-204ENST00000417122 FKBP1AP62942 108 aaKnown RBP19.53■□□□□ 0.72
ITGB1-204ENST00000417122 CYP4F22Q6NT55 531 aa19.53■□□□□ 0.72
ITGB1-204ENST00000417122 CERS5Q8N5B7 392 aa19.53■□□□□ 0.72
ITGB1-204ENST00000417122 TDRD7Q8NHU6 1098 aaKnown RBP19.53■□□□□ 0.72
ITGB1-204ENST00000417122 CAPNS2Q96L46 248 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms