RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CASP7P55210 303 aa18.96■□□□□ 0.63
RPS28-201ENST00000417088 KIF23Q02241 960 aaPredicted RBP18.96■□□□□ 0.63
RPS28-201ENST00000417088 TXNRD3Q86VQ6 643 aa18.96■□□□□ 0.63
RPS28-201ENST00000417088 MRS2Q9HD23 443 aa18.96■□□□□ 0.63
RPS28-201ENST00000417088 FANCIQ9NVI1 1328 aa18.96■□□□□ 0.63
RPS28-201ENST00000417088 CASP8AP2Q9UKL3 1982 aa18.95■□□□□ 0.62
RPS28-201ENST00000417088 VAMP4O75379 141 aa18.95■□□□□ 0.62
RPS28-201ENST00000417088 CSF1RP07333 972 aa18.95■□□□□ 0.62
RPS28-201ENST00000417088 ITGA6P23229 1130 aa18.95■□□□□ 0.62
RPS28-201ENST00000417088 IGHMBP2P38935 993 aaKnown RBP18.95■□□□□ 0.62
RPS28-201ENST00000417088 FKBP5Q13451 457 aaPredicted RBP18.95■□□□□ 0.62
RPS28-201ENST00000417088 DACT2Q5SW24 774 aa18.95■□□□□ 0.62
RPS28-201ENST00000417088 DNAAF4Q8WXU2 420 aa18.95■□□□□ 0.62
RPS28-201ENST00000417088 MXD3Q9BW11 206 aa18.95■□□□□ 0.62
RPS28-201ENST00000417088 LEMD3Q9Y2U8 911 aa18.95■□□□□ 0.62
RPS28-201ENST00000417088 CCDC85CA6NKD9 419 aa18.94■□□□□ 0.62
RPS28-201ENST00000417088 SLC10A3P09131 477 aa18.94■□□□□ 0.62
RPS28-201ENST00000417088 FAM161AQ3B820 660 aa18.94■□□□□ 0.62
RPS28-201ENST00000417088 LINS1Q8NG48 757 aa18.94■□□□□ 0.62
RPS28-201ENST00000417088 COA1Q9GZY4 146 aa18.94■□□□□ 0.62
RPS28-201ENST00000417088 MYH16Q9H6N6 1097 aa18.94■□□□□ 0.62
RPS28-201ENST00000417088 SALL2Q9Y467 1007 aaPredicted RBP18.94■□□□□ 0.62
RPS28-201ENST00000417088 PITPNM2Q9BZ72 1349 aa18.94■□□□□ 0.62
RPS28-201ENST00000417088 SPEF2Q9C093 1822 aa18.93■□□□□ 0.62
RPS28-201ENST00000417088 STRIP1Q5VSL9 837 aa18.93■□□□□ 0.62
RPS28-201ENST00000417088 WDR63Q8IWG1 891 aa18.93■□□□□ 0.62
RPS28-201ENST00000417088 MCOLN1Q9GZU1 580 aa18.93■□□□□ 0.62
RPS28-201ENST00000417088 SCAF8Q9UPN6 1271 aaKnown RBP18.93■□□□□ 0.62
RPS28-201ENST00000417088 KLRK1P26718 216 aa18.92■□□□□ 0.62
RPS28-201ENST00000417088 FKBP1BP68106 108 aa18.92■□□□□ 0.62
RPS28-201ENST00000417088 EXOSC9Q06265 439 aaKnown RBP18.92■□□□□ 0.62
RPS28-201ENST00000417088 NBPF9Q3BBW0 867 aa18.92■□□□□ 0.62
RPS28-201ENST00000417088 ANKRD2Q9GZV1 360 aa18.92■□□□□ 0.62
RPS28-201ENST00000417088 ZNF804BA4D1E1 1349 aa18.92■□□□□ 0.62
RPS28-201ENST00000417088 OGFOD1Q8N543 542 aa18.91■□□□□ 0.62
RPS28-201ENST00000417088 FBXW7Q969H0 707 aa18.91■□□□□ 0.62
RPS28-201ENST00000417088 CSRNP1Q96S65 589 aa18.91■□□□□ 0.62
RPS28-201ENST00000417088 MPHOSPH8Q99549 860 aa18.91■□□□□ 0.62
RPS28-201ENST00000417088 RNF186Q9NXI6 227 aa18.91■□□□□ 0.62
RPS28-201ENST00000417088 SAGE1Q9NXZ1 904 aa18.91■□□□□ 0.62
RPS28-201ENST00000417088 MYO3BQ8WXR4 1341 aa18.91■□□□□ 0.62
RPS28-201ENST00000417088 DGKZQ13574 1117 aa18.9■□□□□ 0.62
RPS28-201ENST00000417088 PRAMEF18Q5VWM3 479 aa18.9■□□□□ 0.62
RPS28-201ENST00000417088 MOB2Q70IA6 237 aa18.9■□□□□ 0.62
RPS28-201ENST00000417088 RASAL3Q86YV0 1011 aa18.9■□□□□ 0.62
RPS28-201ENST00000417088 ZNF646O15015 1829 aaPredicted RBP18.89■□□□□ 0.61
RPS28-201ENST00000417088 WNT10BO00744 389 aa18.89■□□□□ 0.61
RPS28-201ENST00000417088 ANP32CO43423 234 aa18.89■□□□□ 0.61
RPS28-201ENST00000417088 TRPA1O75762 1119 aa18.89■□□□□ 0.61
RPS28-201ENST00000417088 CHRNDQ07001 517 aa18.89■□□□□ 0.61
RPS28-201ENST00000417088 TTLL5Q6EMB2 1281 aa18.89■□□□□ 0.61
RPS28-201ENST00000417088 SPINK5Q9NQ38 1064 aaPredicted RBP18.89■□□□□ 0.61
RPS28-201ENST00000417088 CACNA1FO60840 1977 aa18.88■□□□□ 0.61
RPS28-201ENST00000417088 ANKRD18BA2A2Z9 1011 aa18.88■□□□□ 0.61
RPS28-201ENST00000417088 F6X3S4 739 aa18.88■□□□□ 0.61
RPS28-201ENST00000417088 RGS19P49795 217 aa18.88■□□□□ 0.61
RPS28-201ENST00000417088 FOXO4P98177 505 aa18.88■□□□□ 0.61
RPS28-201ENST00000417088 BEND3Q5T5X7 828 aa18.88■□□□□ 0.61
RPS28-201ENST00000417088 PAPPA2Q9BXP8 1791 aa18.88■□□□□ 0.61
RPS28-201ENST00000417088 UBE2Q2LH0YL09 131 aa18.87■□□□□ 0.61
RPS28-201ENST00000417088 SASH1O94885 1247 aa18.87■□□□□ 0.61
RPS28-201ENST00000417088 KCNJ4P48050 445 aa18.87■□□□□ 0.61
RPS28-201ENST00000417088 MMP14P50281 582 aa18.87■□□□□ 0.61
RPS28-201ENST00000417088 GTF2IP78347 998 aa18.87■□□□□ 0.61
RPS28-201ENST00000417088 IRS2Q9Y4H2 1338 aa18.86■□□□□ 0.61
RPS28-201ENST00000417088 SNAP23O00161 211 aa18.86■□□□□ 0.61
RPS28-201ENST00000417088 KIAA0825Q8IV33 1275 aa18.86■□□□□ 0.61
RPS28-201ENST00000417088 REM2Q8IYK8 340 aaPredicted RBP18.86■□□□□ 0.61
RPS28-201ENST00000417088 CD209Q9NNX6 404 aa18.86■□□□□ 0.61
RPS28-201ENST00000417088 TAF5LO75529 589 aa18.85■□□□□ 0.61
RPS28-201ENST00000417088 IFIT5Q13325 482 aaKnown RBP18.85■□□□□ 0.61
RPS28-201ENST00000417088 HELBQ8NG08 1087 aaPredicted RBP18.85■□□□□ 0.61
RPS28-201ENST00000417088 ZBED3Q96IU2 234 aaPredicted RBP18.85■□□□□ 0.61
RPS28-201ENST00000417088 ZNF316A6NFI3 1004 aaPredicted RBP18.84■□□□□ 0.61
RPS28-201ENST00000417088 EPHA10Q5JZY3 1008 aa18.84■□□□□ 0.61
RPS28-201ENST00000417088 C15orf52Q6ZUT6 534 aaKnown RBP18.84■□□□□ 0.61
RPS28-201ENST00000417088 HDAC9Q9UKV0 1011 aa18.84■□□□□ 0.61
RPS28-201ENST00000417088 CHMP3Q9Y3E7 222 aa18.84■□□□□ 0.61
RPS28-201ENST00000417088 AKAP11Q9UKA4 1901 aa18.84■□□□□ 0.61
RPS28-201ENST00000417088 MLLT1Q03111 559 aaPredicted RBP18.83■□□□□ 0.6
RPS28-201ENST00000417088 TTLL12Q14166 644 aaPredicted RBP18.83■□□□□ 0.6
RPS28-201ENST00000417088 LMBR1LQ6UX01 489 aa18.83■□□□□ 0.6
RPS28-201ENST00000417088 NF2P35240 595 aa18.82■□□□□ 0.6
RPS28-201ENST00000417088 ZEB1P37275 1124 aaPredicted RBP18.82■□□□□ 0.6
RPS28-201ENST00000417088 APOBEC3FQ8IUX4 373 aaKnown RBP18.82■□□□□ 0.6
RPS28-201ENST00000417088 CERS5Q8N5B7 392 aa18.82■□□□□ 0.6
RPS28-201ENST00000417088 GRM8O00222 908 aa18.81■□□□□ 0.6
RPS28-201ENST00000417088 ZNF594Q96JF6 807 aaPredicted RBP18.81■□□□□ 0.6
RPS28-201ENST00000417088 IL1R1P14778 569 aa18.8■□□□□ 0.6
RPS28-201ENST00000417088 DLGAP5Q15398 846 aa18.8■□□□□ 0.6
RPS28-201ENST00000417088 CCDC57Q2TAC2 916 aa18.8■□□□□ 0.6
RPS28-201ENST00000417088 FAM9BQ8IZU0 186 aa18.8■□□□□ 0.6
RPS28-201ENST00000417088 PTPN12Q05209 780 aaKnown RBP18.79■□□□□ 0.6
RPS28-201ENST00000417088 PRKG1Q13976 671 aa18.79■□□□□ 0.6
RPS28-201ENST00000417088 LDHAL6AQ6ZMR3 332 aa18.79■□□□□ 0.6
RPS28-201ENST00000417088 ARMC9Q7Z3E5 817 aa18.79■□□□□ 0.6
RPS28-201ENST00000417088 ZNF804AQ7Z570 1209 aa18.79■□□□□ 0.6
RPS28-201ENST00000417088 MTMR14Q8NCE2 650 aa18.79■□□□□ 0.6
RPS28-201ENST00000417088 C9orf78Q9NZ63 289 aaPredicted RBP18.79■□□□□ 0.6
RPS28-201ENST00000417088 PLIN1O60240 522 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms