RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 TJP1Q07157 1748 aa11.77□□□□□ -0.53
LINC00494-201ENST00000416742 SHANK3Q9BYB0 1731 aa11.76□□□□□ -0.53
LINC00494-201ENST00000416742 NUTM2BA6NNL0 878 aaPredicted RBP11.76□□□□□ -0.53
LINC00494-201ENST00000416742 NUTM2EB1AL46 878 aaPredicted RBP11.76□□□□□ -0.53
LINC00494-201ENST00000416742 NUTM2AQ8IVF1 878 aaPredicted RBP11.76□□□□□ -0.53
LINC00494-201ENST00000416742 MPNDQ8N594 471 aa11.76□□□□□ -0.53
LINC00494-201ENST00000416742 SPATA32Q96LK8 384 aa11.76□□□□□ -0.53
LINC00494-201ENST00000416742 NCOA5Q9HCD5 579 aaKnown RBP11.76□□□□□ -0.53
LINC00494-201ENST00000416742 FBXO3Q9UK99 471 aa11.76□□□□□ -0.53
LINC00494-201ENST00000416742 RIPOR2Q9Y4F9 1068 aa11.76□□□□□ -0.53
LINC00494-201ENST00000416742 LETM1O95202 739 aaPredicted RBP11.76□□□□□ -0.53
LINC00494-201ENST00000416742 CEBPZQ03701 1054 aaKnown RBP11.76□□□□□ -0.53
LINC00494-201ENST00000416742 TOGARAM1Q9Y4F4 1720 aa11.76□□□□□ -0.53
LINC00494-201ENST00000416742 PDIA4P13667 645 aaKnown RBP11.76□□□□□ -0.53
LINC00494-201ENST00000416742 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC00494-201ENST00000416742 ABCA3Q99758 1704 aa11.76□□□□□ -0.53
LINC00494-201ENST00000416742 CAMK4Q16566 473 aa11.75□□□□□ -0.53
LINC00494-201ENST00000416742 PDLIM2Q96JY6 352 aa11.75□□□□□ -0.53
LINC00494-201ENST00000416742 PUS7LQ9H0K6 701 aaKnown RBP11.75□□□□□ -0.53
LINC00494-201ENST00000416742 BCL9O00512 1426 aa11.75□□□□□ -0.53
LINC00494-201ENST00000416742 PDE8AO60658 829 aa11.75□□□□□ -0.53
LINC00494-201ENST00000416742 IDH1O75874 414 aaKnown RBP11.75□□□□□ -0.53
LINC00494-201ENST00000416742 GPHNQ9NQX3 736 aaPredicted RBP11.75□□□□□ -0.53
LINC00494-201ENST00000416742 PFKFB2O60825 505 aa11.74□□□□□ -0.53
LINC00494-201ENST00000416742 ZFYP08048 801 aaPredicted RBP11.74□□□□□ -0.53
LINC00494-201ENST00000416742 EXOSC10Q01780 885 aaKnown RBP11.74□□□□□ -0.53
LINC00494-201ENST00000416742 GUCY1B3Q02153 619 aa11.74□□□□□ -0.53
LINC00494-201ENST00000416742 DDB1Q16531 1140 aa11.74□□□□□ -0.53
LINC00494-201ENST00000416742 IMMTQ16891 758 aaKnown RBP11.74□□□□□ -0.53
LINC00494-201ENST00000416742 CTNNA3Q9UI47 895 aa11.74□□□□□ -0.53
LINC00494-201ENST00000416742 PAPPAQ13219 1627 aa11.74□□□□□ -0.53
LINC00494-201ENST00000416742 CDHR2Q9BYE9 1310 aa11.74□□□□□ -0.53
LINC00494-201ENST00000416742 FGAP02671 866 aa11.74□□□□□ -0.53
LINC00494-201ENST00000416742 APPP05067 770 aa11.74□□□□□ -0.53
LINC00494-201ENST00000416742 LIG1P18858 919 aa11.74□□□□□ -0.53
LINC00494-201ENST00000416742 ATP6V1AP38606 617 aa11.74□□□□□ -0.53
LINC00494-201ENST00000416742 MCAMP43121 646 aa11.74□□□□□ -0.53
LINC00494-201ENST00000416742 SCAND2PQ9GZW5 306 aaPredicted RBP11.74□□□□□ -0.53
LINC00494-201ENST00000416742 IL6STP40189 918 aaPredicted RBP11.74□□□□□ -0.53
LINC00494-201ENST00000416742 RAB11FIP4Q86YS3 637 aa11.74□□□□□ -0.53
LINC00494-201ENST00000416742 APPBP2Q92624 585 aa11.74□□□□□ -0.53
LINC00494-201ENST00000416742 USP25Q9UHP3 1055 aa11.74□□□□□ -0.53
LINC00494-201ENST00000416742 TAOK2Q9UL54 1235 aa11.74□□□□□ -0.53
LINC00494-201ENST00000416742 PTPDC1A2A3K4 754 aa11.73□□□□□ -0.53
LINC00494-201ENST00000416742 SNAP23O00161 211 aa11.73□□□□□ -0.53
LINC00494-201ENST00000416742 GPAA1O43292 621 aa11.73□□□□□ -0.53
LINC00494-201ENST00000416742 SLC9C2Q5TAH2 1124 aa11.73□□□□□ -0.53
LINC00494-201ENST00000416742 BICD2Q8TD16 824 aa11.73□□□□□ -0.53
LINC00494-201ENST00000416742 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.73□□□□□ -0.53
LINC00494-201ENST00000416742 NSUN7Q8NE18 718 aaKnown RBP11.73□□□□□ -0.53
LINC00494-201ENST00000416742 LEO1Q8WVC0 666 aaPredicted RBP11.73□□□□□ -0.53
LINC00494-201ENST00000416742 UBN2Q6ZU65 1347 aa11.73□□□□□ -0.53
LINC00494-201ENST00000416742 PHKA1P46020 1223 aa11.73□□□□□ -0.53
LINC00494-201ENST00000416742 ZNF213O14771 459 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 PDE8BO95263 885 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 PDIA3P30101 505 aaKnown RBP11.72□□□□□ -0.53
LINC00494-201ENST00000416742 RALYLQ86SE5 291 aaKnown RBP11.72□□□□□ -0.53
LINC00494-201ENST00000416742 NHSL1Q5SYE7 1610 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 CTDNEP1O95476 244 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 SUSD4Q5VX71 490 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 CKAP2LQ8IYA6 745 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 NUP62CLQ9H1M0 184 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 DACT1Q9NYF0 836 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 ERVV-1B6SEH8 477 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 RESTQ13127 1097 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 CCDC102BQ68D86 513 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 TICAM2Q86XR7 235 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 SMARCC2Q8TAQ2 1214 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 MPHOSPH8Q99549 860 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 LLPHQ9BRT6 129 aaKnown RBP11.72□□□□□ -0.53
LINC00494-201ENST00000416742 CCDC87Q9NVE4 849 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 CCDC39Q9UFE4 941 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 KIF3AQ9Y496 699 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 DISP2A7MBM2 1401 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 ITGB4P16144 1822 aa11.72□□□□□ -0.53
LINC00494-201ENST00000416742 PRC1O43663 620 aa11.71□□□□□ -0.53
LINC00494-201ENST00000416742 HMGN5P82970 282 aaKnown RBP11.71□□□□□ -0.53
LINC00494-201ENST00000416742 ZNF34Q8IZ26 560 aa11.71□□□□□ -0.53
LINC00494-201ENST00000416742 PIH1D3Q9NQM4 214 aaKnown RBP11.71□□□□□ -0.53
LINC00494-201ENST00000416742 SEC31BQ9NQW1 1179 aa11.71□□□□□ -0.53
LINC00494-201ENST00000416742 FOXP2O15409 715 aa11.71□□□□□ -0.54
LINC00494-201ENST00000416742 CRKLP46109 303 aaKnown RBP11.71□□□□□ -0.54
LINC00494-201ENST00000416742 ZSCAN25Q6NSZ9 544 aa11.71□□□□□ -0.54
LINC00494-201ENST00000416742 RIC1Q4ADV7 1423 aa11.71□□□□□ -0.54
LINC00494-201ENST00000416742 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.7□□□□□ -0.54
LINC00494-201ENST00000416742 UVSSAQ2YD98 709 aa11.7□□□□□ -0.54
LINC00494-201ENST00000416742 HS1BP3Q53T59 392 aa11.7□□□□□ -0.54
LINC00494-201ENST00000416742 TNMDQ9H2S6 317 aa11.7□□□□□ -0.54
LINC00494-201ENST00000416742 ZSCAN16Q9H4T2 348 aaPredicted RBP11.7□□□□□ -0.54
LINC00494-201ENST00000416742 ELP1O95163 1332 aa11.7□□□□□ -0.54
LINC00494-201ENST00000416742 KLF18A0A0U1RQI7 1052 aa11.7□□□□□ -0.54
LINC00494-201ENST00000416742 ADCY5O95622 1261 aa11.7□□□□□ -0.54
LINC00494-201ENST00000416742 MCM5P33992 734 aa11.7□□□□□ -0.54
LINC00494-201ENST00000416742 EIF5P55010 431 aaKnown RBP11.7□□□□□ -0.54
LINC00494-201ENST00000416742 MAP3K11Q16584 847 aa11.7□□□□□ -0.54
LINC00494-201ENST00000416742 NCOA7Q8NI08 942 aa11.7□□□□□ -0.54
LINC00494-201ENST00000416742 ZNF274Q96GC6 653 aaPredicted RBP11.7□□□□□ -0.54
LINC00494-201ENST00000416742 NOL7Q9UMY1 257 aaKnown RBP11.7□□□□□ -0.54
LINC00494-201ENST00000416742 ZNF532Q9HCE3 1301 aa11.7□□□□□ -0.54
LINC00494-201ENST00000416742 LOC102724428A0A0B4J2F2 783 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms