RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 CAMKK2Q96RR4 588 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 C2orf49Q9BVC5 232 aaPredicted RBP3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 LRRC27Q9C0I9 530 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 DNAJC25Q9H1X3 360 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 KANSL2Q9H9L4 492 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 PTPRHQ9HD43 1115 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 LUZP4Q9P127 313 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 ODF2LQ9ULJ1 636 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 MSRB2Q9Y3D2 182 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 DAAM1Q9Y4D1 1078 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 GPSM3Q9Y4H4 160 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 MRVI1Q9Y6F6 885 aa3.81□□□□□ -1.8
CTDSPL-203ENST00000416688 PDPK1O15530 556 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 AKAP10O43572 662 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 IGHA2P01877 340 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 HNRNPCP07910 306 aaKnown RBP eCLIP3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 MYCLP1P12525 358 aaPredicted RBP3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 DEKP35659 375 aaKnown RBP3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 HTR3AP46098 478 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 PTK2Q05397 1052 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 DDX10Q13206 875 aaKnown RBP3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 BIRC3Q13489 604 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 SQSTM1Q13501 440 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 PIN1Q13526 163 aaPredicted RBP3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 SLC9A5Q14940 896 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 MLC1Q15049 377 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 Q3C1V9 767 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 TKFCQ3LXA3 575 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 CCDC184Q52MB2 194 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 ERAP2Q6P179 960 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 POTEEQ6S8J3 1075 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 LCA5Q86VQ0 697 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 HSCBQ8IWL3 235 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 SUGP1Q8IWZ8 645 aaKnown RBP3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 LMNTD2Q8IXW0 634 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 PI4K2BQ8TCG2 481 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 GOLGA1Q92805 767 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 RPGRQ92834 1020 aaKnown RBP3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 NUDT16Q96DE0 195 aaKnown RBP3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 MFSD3Q96ES6 412 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 CDCA7LQ96GN5 454 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 AGBL1Q96MI9 1066 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 SETDB2Q96T68 719 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 ALDH8A1Q9H2A2 487 aaPredicted RBP3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 TMEM134Q9H6X4 195 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 LGR6Q9HBX8 967 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 PRDM11Q9NQV5 511 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 DOLKQ9UPQ8 538 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 KIAA1024Q9UPX6 916 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 EFR3BQ9Y2G0 817 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 PCDHB9Q9Y5E1 797 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 PCDHGA4Q9Y5G9 962 aa3.8□□□□□ -1.8
CTDSPL-203ENST00000416688 WASHC2AQ641Q2 1341 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 PER1O15534 1290 aaPredicted RBP3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 FZD6O60353 706 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 MTA2O94776 668 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 RAPGEF3O95398 923 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 ASMTLO95671 621 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 F2P00734 622 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 NUDT7P0C024 238 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 TRIM27P14373 513 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 IGFBP4P22692 258 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 RRM1P23921 792 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 SOX9P48436 509 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 CCT5P48643 541 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 SARSP49591 514 aaKnown RBP3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 GUCA2AQ02747 115 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 NUCB1Q02818 461 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 APOBRQ0VD83 1088 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 NEXNQ0ZGT2 675 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 KIF22Q14807 665 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 LONRF1Q17RB8 773 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 MTERF2Q49AM1 385 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 TM4SF20Q53R12 229 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 FAM102BQ5T8I3 360 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 TSHZ3Q63HK5 1081 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 PPP4R3AQ6IN85 833 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 C16orf46Q6P387 395 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 PDXDC1Q6P996 788 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 CAPN12Q6ZSI9 719 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 ERMP1Q7Z2K6 904 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 NDUFAF2Q8N183 169 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 ABTB2Q8N961 1025 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 ATRIPQ8WXE1 791 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 ANAPC16Q96DE5 110 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 PAWRQ96IZ0 340 aaKnown RBP3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 JPH4Q96JJ6 628 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 CSRNP1Q96S65 589 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 CDH19Q9H159 772 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 CHMP4BQ9H444 224 aaKnown RBP3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 AASDHPPTQ9NRN7 309 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 STIM2Q9P246 746 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 LEMD3Q9Y2U8 911 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 SH3BP1Q9Y3L3 701 aa3.79□□□□□ -1.8
CTDSPL-203ENST00000416688 NBPF26B4DH59 902 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 WASLO00401 505 aaPredicted RBP3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 SLC5A1P13866 664 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 PHKG2P15735 406 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 HALP42357 657 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms