RNA–Protein interactions for RNA: ENST00000416593.1

AC004012.1-201, humanhuman

TSL 4 BASIC

Gene AC004012.1, Length 534 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004012.1-201ENST00000416593 FOXD4L5Q5VV16 416 aaPredicted RBP9.47□□□□□ -0.89
AC004012.1-201ENST00000416593 MTFR1LQ9H019 292 aa9.47□□□□□ -0.89
AC004012.1-201ENST00000416593 ETNK1Q9HBU6 452 aa9.47□□□□□ -0.89
AC004012.1-201ENST00000416593 MAP3K5Q99683 1374 aa9.47□□□□□ -0.89
AC004012.1-201ENST00000416593 FAM208AQ9UK61 1670 aaKnown RBP9.46□□□□□ -0.89
AC004012.1-201ENST00000416593 COL24A1Q17RW2 1714 aa9.46□□□□□ -0.89
AC004012.1-201ENST00000416593 GNRH1P01148 92 aa9.46□□□□□ -0.9
AC004012.1-201ENST00000416593 SENP2Q9HC62 589 aa9.46□□□□□ -0.9
AC004012.1-201ENST00000416593 POLMQ9NP87 494 aaPredicted RBP9.46□□□□□ -0.9
AC004012.1-201ENST00000416593 SERPINA10Q9UK55 444 aa9.46□□□□□ -0.9
AC004012.1-201ENST00000416593 CDCA8Q53HL2 280 aa9.45□□□□□ -0.9
AC004012.1-201ENST00000416593 ZNF787Q6DD87 383 aa9.45□□□□□ -0.9
AC004012.1-201ENST00000416593 SYT17Q9BSW7 474 aa9.45□□□□□ -0.9
AC004012.1-201ENST00000416593 FHDC1Q9C0D6 1143 aaPredicted RBP9.45□□□□□ -0.9
AC004012.1-201ENST00000416593 DNMT3LQ9UJW3 386 aa9.45□□□□□ -0.9
AC004012.1-201ENST00000416593 KTN1Q86UP2 1357 aaKnown RBP9.45□□□□□ -0.9
AC004012.1-201ENST00000416593 SBNO2Q9Y2G9 1366 aa9.45□□□□□ -0.9
AC004012.1-201ENST00000416593 FIGNL2A6NMB9 653 aa9.44□□□□□ -0.9
AC004012.1-201ENST00000416593 TTLL8A6PVC2 850 aa9.44□□□□□ -0.9
AC004012.1-201ENST00000416593 TMEM229AB2RXF0 380 aa9.44□□□□□ -0.9
AC004012.1-201ENST00000416593 ZBTB7BO15156 539 aaPredicted RBP9.44□□□□□ -0.9
AC004012.1-201ENST00000416593 GDF10P55107 478 aa9.44□□□□□ -0.9
AC004012.1-201ENST00000416593 CLN3Q13286 438 aa9.44□□□□□ -0.9
AC004012.1-201ENST00000416593 OGFOD1Q8N543 542 aa9.44□□□□□ -0.9
AC004012.1-201ENST00000416593 KIFC2Q96AC6 838 aa9.44□□□□□ -0.9
AC004012.1-201ENST00000416593 ROCK2O75116 1388 aaKnown RBP9.44□□□□□ -0.9
AC004012.1-201ENST00000416593 USP31Q70CQ4 1352 aa9.44□□□□□ -0.9
AC004012.1-201ENST00000416593 TUBGCP6Q96RT7 1819 aa9.43□□□□□ -0.9
AC004012.1-201ENST00000416593 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.43□□□□□ -0.9
AC004012.1-201ENST00000416593 CRTC2Q53ET0 693 aaPredicted RBP9.43□□□□□ -0.9
AC004012.1-201ENST00000416593 TRIM50Q86XT4 487 aa9.43□□□□□ -0.9
AC004012.1-201ENST00000416593 RNF217Q8TC41 542 aa9.43□□□□□ -0.9
AC004012.1-201ENST00000416593 CNKSR1Q969H4 720 aa9.43□□□□□ -0.9
AC004012.1-201ENST00000416593 L3MBTL2Q969R5 705 aa9.43□□□□□ -0.9
AC004012.1-201ENST00000416593 DNAAF2Q9NVR5 837 aaKnown RBP9.43□□□□□ -0.9
AC004012.1-201ENST00000416593 HRH3Q9Y5N1 445 aa9.43□□□□□ -0.9
AC004012.1-201ENST00000416593 INHAP05111 366 aa9.42□□□□□ -0.9
AC004012.1-201ENST00000416593 IL2RBP14784 551 aa9.42□□□□□ -0.9
AC004012.1-201ENST00000416593 RASA1P20936 1047 aa9.42□□□□□ -0.9
AC004012.1-201ENST00000416593 XAGE2Q96GT9 111 aa9.42□□□□□ -0.9
AC004012.1-201ENST00000416593 ZNF594Q96JF6 807 aaPredicted RBP9.42□□□□□ -0.9
AC004012.1-201ENST00000416593 ARXQ96QS3 562 aa9.42□□□□□ -0.9
AC004012.1-201ENST00000416593 ESYT1Q9BSJ8 1104 aa9.42□□□□□ -0.9
AC004012.1-201ENST00000416593 VRTNQ9H8Y1 702 aa9.42□□□□□ -0.9
AC004012.1-201ENST00000416593 LY75O60449 1722 aa9.42□□□□□ -0.9
AC004012.1-201ENST00000416593 CD163L1Q9NR16 1453 aa9.41□□□□□ -0.9
AC004012.1-201ENST00000416593 DKK1O94907 266 aa9.41□□□□□ -0.9
AC004012.1-201ENST00000416593 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.41□□□□□ -0.9
AC004012.1-201ENST00000416593 TPCN2Q8NHX9 752 aa9.41□□□□□ -0.9
AC004012.1-201ENST00000416593 NLRP3Q96P20 1036 aa9.41□□□□□ -0.9
AC004012.1-201ENST00000416593 ARID3AQ99856 593 aa9.41□□□□□ -0.9
AC004012.1-201ENST00000416593 NLRP2Q9NX02 1062 aa9.41□□□□□ -0.9
AC004012.1-201ENST00000416593 SERTAD1Q9UHV2 236 aa9.41□□□□□ -0.9
AC004012.1-201ENST00000416593 EDC4Q6P2E9 1401 aaKnown RBP9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 GOLGB1Q14789 3259 aaKnown RBP9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 USP17L15C9J2P7 530 aa9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 USP17L10C9JJH3 530 aa9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 USP17L13C9JLJ4 530 aa9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 USP17L12C9JPN9 530 aa9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 USP17L11C9JVI0 530 aa9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 USP17L21D6R901 530 aa9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 USP17L18D6R9N7 530 aa9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 USP17L22D6RA61 530 aa9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 USP17L17D6RBQ6 530 aa9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 USP17L19D6RCP7 530 aa9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 USP17L20D6RJB6 530 aa9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 MAN1A2O60476 641 aa9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 RNF144AP50876 292 aaPredicted RBP9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 ATP1A2P50993 1020 aa9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 USP17L24Q0WX57 530 aa9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 CCDC102BQ68D86 513 aa9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 SLC16A10Q8TF71 515 aa9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 ACSBG1Q96GR2 724 aa9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 ZNF358Q9NW07 568 aa9.4□□□□□ -0.9
AC004012.1-201ENST00000416593 DOT1LQ8TEK3 1739 aa9.39□□□□□ -0.91
AC004012.1-201ENST00000416593 SHANK3Q9BYB0 1731 aa9.39□□□□□ -0.91
AC004012.1-201ENST00000416593 CENPCQ03188 943 aa9.39□□□□□ -0.91
AC004012.1-201ENST00000416593 PTK7Q13308 1070 aa9.39□□□□□ -0.91
AC004012.1-201ENST00000416593 ZNF827Q17R98 1081 aa9.39□□□□□ -0.91
AC004012.1-201ENST00000416593 SLC27A3Q5K4L6 730 aa9.39□□□□□ -0.91
AC004012.1-201ENST00000416593 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.39□□□□□ -0.91
AC004012.1-201ENST00000416593 LARGE2Q8N3Y3 721 aa9.39□□□□□ -0.91
AC004012.1-201ENST00000416593 ANKRD24Q8TF21 1146 aa9.39□□□□□ -0.91
AC004012.1-201ENST00000416593 C1QTNF8P60827 252 aa9.38□□□□□ -0.91
AC004012.1-201ENST00000416593 PRICKLE2Q7Z3G6 844 aa9.38□□□□□ -0.91
AC004012.1-201ENST00000416593 NME9Q86XW9 330 aa9.38□□□□□ -0.91
AC004012.1-201ENST00000416593 SIX5Q8N196 739 aa9.38□□□□□ -0.91
AC004012.1-201ENST00000416593 GRIP2Q9C0E4 1043 aa9.38□□□□□ -0.91
AC004012.1-201ENST00000416593 LRRC4BQ9NT99 713 aa9.38□□□□□ -0.91
AC004012.1-201ENST00000416593 RGPD2P0DJD1 1756 aa9.37□□□□□ -0.91
AC004012.1-201ENST00000416593 SENP3-EIF4A1A0A087X0R7 540 aa9.37□□□□□ -0.91
AC004012.1-201ENST00000416593 FAM196BA6NMK8 535 aa9.37□□□□□ -0.91
AC004012.1-201ENST00000416593 SFI1A8K8P3 1242 aa9.37□□□□□ -0.91
AC004012.1-201ENST00000416593 POLD1P28340 1107 aa9.37□□□□□ -0.91
AC004012.1-201ENST00000416593 GPC1P35052 558 aa9.37□□□□□ -0.91
AC004012.1-201ENST00000416593 TLR1Q15399 786 aa9.37□□□□□ -0.91
AC004012.1-201ENST00000416593 HDGFL2Q7Z4V5 671 aaPredicted RBP9.37□□□□□ -0.91
AC004012.1-201ENST00000416593 USP3Q9Y6I4 520 aa9.37□□□□□ -0.91
AC004012.1-201ENST00000416593 A0A1W2PP64 1363 aa9.37□□□□□ -0.91
AC004012.1-201ENST00000416593 PNPLA7Q6ZV29 1317 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms