RNA–Protein interactions for RNA: ENST00000416247.3

SMIM13-202, Transcript of small integral membrane protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM13, Length 4,688 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM13-202ENST00000416247 CCDC40Q4G0X9 1142 aa18.55■□□□□ 0.56
SMIM13-202ENST00000416247 LEKR1Q6ZMV7 388 aa18.55■□□□□ 0.56
SMIM13-202ENST00000416247 CCDC191Q8NCU4 936 aa18.55■□□□□ 0.56
SMIM13-202ENST00000416247 YEATS4O95619 227 aa18.55■□□□□ 0.56
SMIM13-202ENST00000416247 TSPYL1Q9H0U9 437 aa18.55■□□□□ 0.56
SMIM13-202ENST00000416247 ZNF804AQ7Z570 1209 aa18.55■□□□□ 0.56
SMIM13-202ENST00000416247 CCDC102AQ96A19 550 aa18.55■□□□□ 0.56
SMIM13-202ENST00000416247 PRIM1P49642 420 aaKnown RBP18.55■□□□□ 0.56
SMIM13-202ENST00000416247 GNAQP50148 359 aa18.55■□□□□ 0.56
SMIM13-202ENST00000416247 UVSSAQ2YD98 709 aa18.55■□□□□ 0.56
SMIM13-202ENST00000416247 IL17REQ8NFR9 667 aa18.55■□□□□ 0.56
SMIM13-202ENST00000416247 FAM200AQ8TCP9 573 aa18.55■□□□□ 0.56
SMIM13-202ENST00000416247 INTS4Q96HW7 963 aaKnown RBP18.55■□□□□ 0.56
SMIM13-202ENST00000416247 FAM227BQ96M60 508 aa18.55■□□□□ 0.56
SMIM13-202ENST00000416247 DNAJC25Q9H1X3 360 aa18.55■□□□□ 0.56
SMIM13-202ENST00000416247 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.54■□□□□ 0.56
SMIM13-202ENST00000416247 N4BP3O15049 544 aa18.54■□□□□ 0.56
SMIM13-202ENST00000416247 SPTLC2O15270 562 aa18.54■□□□□ 0.56
SMIM13-202ENST00000416247 NEMFO60524 1076 aa18.54■□□□□ 0.56
SMIM13-202ENST00000416247 MBD4O95243 580 aa18.54■□□□□ 0.56
SMIM13-202ENST00000416247 GCKRQ14397 625 aa18.54■□□□□ 0.56
SMIM13-202ENST00000416247 KCNQ3O43525 872 aa18.54■□□□□ 0.56
SMIM13-202ENST00000416247 GNAT2P19087 354 aa18.54■□□□□ 0.56
SMIM13-202ENST00000416247 SCLT1Q96NL6 688 aa18.54■□□□□ 0.56
SMIM13-202ENST00000416247 SAMM50Q9Y512 469 aa18.54■□□□□ 0.56
SMIM13-202ENST00000416247 LMTK3Q96Q04 1460 aa18.54■□□□□ 0.56
SMIM13-202ENST00000416247 LIG1P18858 919 aa18.54■□□□□ 0.56
SMIM13-202ENST00000416247 VPS36Q86VN1 386 aa18.54■□□□□ 0.56
SMIM13-202ENST00000416247 ZNF830Q96NB3 372 aaPredicted RBP18.54■□□□□ 0.56
SMIM13-202ENST00000416247 ZKSCAN3Q9BRR0 538 aa18.54■□□□□ 0.56
SMIM13-202ENST00000416247 CWC15Q9P013 229 aaKnown RBP18.54■□□□□ 0.56
SMIM13-202ENST00000416247 TRIM47Q96LD4 638 aa18.53■□□□□ 0.56
SMIM13-202ENST00000416247 TRIM75PA6NK02 468 aa18.53■□□□□ 0.56
SMIM13-202ENST00000416247 OGFOD1Q8N543 542 aa18.53■□□□□ 0.56
SMIM13-202ENST00000416247 PYM1Q9BRP8 204 aaKnown RBP18.53■□□□□ 0.56
SMIM13-202ENST00000416247 BLMP54132 1417 aaPredicted RBP18.53■□□□□ 0.56
SMIM13-202ENST00000416247 DTNBO60941 627 aa18.53■□□□□ 0.56
SMIM13-202ENST00000416247 BMP15O95972 392 aa18.52■□□□□ 0.56
SMIM13-202ENST00000416247 TMCO3Q6UWJ1 677 aa18.52■□□□□ 0.56
SMIM13-202ENST00000416247 EHMT1Q9H9B1 1298 aa18.52■□□□□ 0.56
SMIM13-202ENST00000416247 SLAIN2Q9P270 581 aa18.52■□□□□ 0.56
SMIM13-202ENST00000416247 NEO1Q92859 1461 aa18.52■□□□□ 0.56
SMIM13-202ENST00000416247 NAPAP54920 295 aa18.52■□□□□ 0.56
SMIM13-202ENST00000416247 RNF123Q5XPI4 1314 aa18.52■□□□□ 0.56
SMIM13-202ENST00000416247 RIMBP2O15034 1052 aa18.52■□□□□ 0.56
SMIM13-202ENST00000416247 MYO1BO43795 1136 aa18.52■□□□□ 0.56
SMIM13-202ENST00000416247 SGSM2O43147 1006 aa18.51■□□□□ 0.55
SMIM13-202ENST00000416247 UBASH3AP57075 661 aa18.51■□□□□ 0.55
SMIM13-202ENST00000416247 TAF3Q5VWG9 929 aa18.51■□□□□ 0.55
SMIM13-202ENST00000416247 LDHBP07195 334 aaKnown RBP18.51■□□□□ 0.55
SMIM13-202ENST00000416247 TAX1BP1Q86VP1 789 aa18.51■□□□□ 0.55
SMIM13-202ENST00000416247 CASQ1P31415 396 aa18.51■□□□□ 0.55
SMIM13-202ENST00000416247 CCDC178Q5BJE1 867 aa18.51■□□□□ 0.55
SMIM13-202ENST00000416247 RRAGBQ5VZM2 374 aa18.51■□□□□ 0.55
SMIM13-202ENST00000416247 CCDC186Q7Z3E2 898 aa18.51■□□□□ 0.55
SMIM13-202ENST00000416247 XAGE2Q96GT9 111 aa18.51■□□□□ 0.55
SMIM13-202ENST00000416247 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.51■□□□□ 0.55
SMIM13-202ENST00000416247 STAT6P42226 847 aa18.5■□□□□ 0.55
SMIM13-202ENST00000416247 MAGI2Q86UL8 1455 aa18.5■□□□□ 0.55
SMIM13-202ENST00000416247 CCDC66A2RUB6 948 aa18.5■□□□□ 0.55
SMIM13-202ENST00000416247 USO1O60763 962 aaKnown RBP18.5■□□□□ 0.55
SMIM13-202ENST00000416247 PPP4R3AQ6IN85 833 aa18.5■□□□□ 0.55
SMIM13-202ENST00000416247 AOPEPQ8N6M6 819 aa18.5■□□□□ 0.55
SMIM13-202ENST00000416247 LMOD1P29536 600 aaPredicted RBP18.5■□□□□ 0.55
SMIM13-202ENST00000416247 DHX58Q96C10 678 aa18.5■□□□□ 0.55
SMIM13-202ENST00000416247 B4E1Z4 1266 aa18.5■□□□□ 0.55
SMIM13-202ENST00000416247 USP44Q9H0E7 712 aa18.5■□□□□ 0.55
SMIM13-202ENST00000416247 HELLSQ9NRZ9 838 aa18.5■□□□□ 0.55
SMIM13-202ENST00000416247 JAKMIP3Q5VZ66 844 aa18.49■□□□□ 0.55
SMIM13-202ENST00000416247 PARP10Q53GL7 1025 aa18.49■□□□□ 0.55
SMIM13-202ENST00000416247 EXOC1Q9NV70 894 aa18.49■□□□□ 0.55
SMIM13-202ENST00000416247 GIGYF1O75420 1035 aaPredicted RBP18.49■□□□□ 0.55
SMIM13-202ENST00000416247 POTEJP0CG39 1038 aa18.49■□□□□ 0.55
SMIM13-202ENST00000416247 USP8P40818 1118 aa18.49■□□□□ 0.55
SMIM13-202ENST00000416247 CCDC24Q8N4L8 307 aa18.49■□□□□ 0.55
SMIM13-202ENST00000416247 CRACR2AQ9BSW2 395 aa18.49■□□□□ 0.55
SMIM13-202ENST00000416247 CCNL1Q9UK58 526 aaPredicted RBP18.49■□□□□ 0.55
SMIM13-202ENST00000416247 SLC27A2O14975 620 aa18.49■□□□□ 0.55
SMIM13-202ENST00000416247 PDE8AO60658 829 aa18.49■□□□□ 0.55
SMIM13-202ENST00000416247 TAF5LO75529 589 aa18.49■□□□□ 0.55
SMIM13-202ENST00000416247 TRAPPC3LQ5T215 181 aa18.49■□□□□ 0.55
SMIM13-202ENST00000416247 FAM173BQ6P4H8 233 aa18.49■□□□□ 0.55
SMIM13-202ENST00000416247 ANKRD2Q9GZV1 360 aa18.49■□□□□ 0.55
SMIM13-202ENST00000416247 METP08581 1390 aa18.48■□□□□ 0.55
SMIM13-202ENST00000416247 TYRO3Q06418 890 aa18.48■□□□□ 0.55
SMIM13-202ENST00000416247 SNX14Q9Y5W7 946 aa18.48■□□□□ 0.55
SMIM13-202ENST00000416247 TARBP1Q13395 1621 aaKnown RBP18.48■□□□□ 0.55
SMIM13-202ENST00000416247 ARHGEF10O15013 1369 aa18.48■□□□□ 0.55
SMIM13-202ENST00000416247 SNW1Q13573 536 aaKnown RBP18.48■□□□□ 0.55
SMIM13-202ENST00000416247 PUM3Q15397 648 aaKnown RBP18.48■□□□□ 0.55
SMIM13-202ENST00000416247 KIAA0232Q92628 1395 aa18.48■□□□□ 0.55
SMIM13-202ENST00000416247 CALM1P0DP23 149 aa18.47■□□□□ 0.55
SMIM13-202ENST00000416247 CALM2P0DP24 149 aa18.47■□□□□ 0.55
SMIM13-202ENST00000416247 CALM3P0DP25 149 aa18.47■□□□□ 0.55
SMIM13-202ENST00000416247 CNBD1Q8NA66 436 aa18.47■□□□□ 0.55
SMIM13-202ENST00000416247 KBTBD3Q8NAB2 608 aa18.47■□□□□ 0.55
SMIM13-202ENST00000416247 RTL1A6NKG5 1358 aa18.47■□□□□ 0.55
SMIM13-202ENST00000416247 PAFAH1B1P43034 410 aa18.47■□□□□ 0.55
SMIM13-202ENST00000416247 SYCP3Q8IZU3 236 aa18.47■□□□□ 0.55
SMIM13-202ENST00000416247 APPBP2Q92624 585 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms