RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 CMTR1Q8N1G2 835 aaKnown RBP8.98□□□□□ -0.97
EPHA4-204ENST00000415749 NUDT16Q96DE0 195 aaKnown RBP8.98□□□□□ -0.97
EPHA4-204ENST00000415749 VWDEQ8N2E2 1590 aa8.98□□□□□ -0.97
EPHA4-204ENST00000415749 LRRC7Q96NW7 1537 aa8.97□□□□□ -0.97
EPHA4-204ENST00000415749 EFSO43281 561 aa8.97□□□□□ -0.97
EPHA4-204ENST00000415749 MAPTP10636 758 aaKnown RBP8.97□□□□□ -0.97
EPHA4-204ENST00000415749 TCF3P15923 654 aa8.97□□□□□ -0.97
EPHA4-204ENST00000415749 FAM177A1Q8N128 213 aaPredicted RBP8.97□□□□□ -0.97
EPHA4-204ENST00000415749 VWA5B2Q8N398 1253 aa8.97□□□□□ -0.97
EPHA4-204ENST00000415749 DMRTB1Q96MA1 342 aa8.97□□□□□ -0.97
EPHA4-204ENST00000415749 ASB16Q96NS5 453 aa8.97□□□□□ -0.97
EPHA4-204ENST00000415749 NDFIP2Q9NV92 336 aa8.97□□□□□ -0.97
EPHA4-204ENST00000415749 CFDP1Q9UEE9 299 aaPredicted RBP8.97□□□□□ -0.97
EPHA4-204ENST00000415749 NEURL4Q96JN8 1562 aa8.97□□□□□ -0.97
EPHA4-204ENST00000415749 KIF3BO15066 747 aa8.96□□□□□ -0.98
EPHA4-204ENST00000415749 BNIP3LO60238 219 aa8.96□□□□□ -0.98
EPHA4-204ENST00000415749 GJD3Q8N144 294 aa8.96□□□□□ -0.98
EPHA4-204ENST00000415749 ABHD17AQ96GS6 310 aa8.96□□□□□ -0.98
EPHA4-204ENST00000415749 MARK1Q9P0L2 795 aa8.96□□□□□ -0.98
EPHA4-204ENST00000415749 WASHC2CQ9Y4E1 1318 aa8.96□□□□□ -0.98
EPHA4-204ENST00000415749 MIA2Q96PC5 1412 aa8.96□□□□□ -0.98
EPHA4-204ENST00000415749 MED14O60244 1454 aa8.96□□□□□ -0.98
EPHA4-204ENST00000415749 ARHGAP35Q9NRY4 1499 aa8.96□□□□□ -0.98
EPHA4-204ENST00000415749 PREX2Q70Z35 1606 aa8.95□□□□□ -0.98
EPHA4-204ENST00000415749 H3BM21 787 aa8.95□□□□□ -0.98
EPHA4-204ENST00000415749 C8orf34Q49A92 452 aa8.95□□□□□ -0.98
EPHA4-204ENST00000415749 SLC16A10Q8TF71 515 aa8.95□□□□□ -0.98
EPHA4-204ENST00000415749 EFCC1Q9HA90 598 aa8.95□□□□□ -0.98
EPHA4-204ENST00000415749 KIAA1107Q9UPP5 1409 aa8.95□□□□□ -0.98
EPHA4-204ENST00000415749 ANKRD33BA6NCL7 494 aa8.94□□□□□ -0.98
EPHA4-204ENST00000415749 NEFLP07196 543 aa8.94□□□□□ -0.98
EPHA4-204ENST00000415749 FGFR3P22607 806 aa8.94□□□□□ -0.98
EPHA4-204ENST00000415749 SFSWAPQ12872 951 aaKnown RBP8.94□□□□□ -0.98
EPHA4-204ENST00000415749 FAM182BQ5T319 152 aa8.94□□□□□ -0.98
EPHA4-204ENST00000415749 FAM129BQ96TA1 746 aa8.94□□□□□ -0.98
EPHA4-204ENST00000415749 ATP7AQ04656 1500 aa8.94□□□□□ -0.98
EPHA4-204ENST00000415749 FAM135AQ9P2D6 1515 aa8.94□□□□□ -0.98
EPHA4-204ENST00000415749 POLR1AO95602 1720 aaPredicted RBP8.94□□□□□ -0.98
EPHA4-204ENST00000415749 XYLBO75191 536 aa8.93□□□□□ -0.98
EPHA4-204ENST00000415749 EGFRP00533 1210 aa8.93□□□□□ -0.98
EPHA4-204ENST00000415749 NEUROD1Q13562 356 aa8.93□□□□□ -0.98
EPHA4-204ENST00000415749 ZNF326Q5BKZ1 582 aaKnown RBP8.93□□□□□ -0.98
EPHA4-204ENST00000415749 PDE12Q6L8Q7 609 aaKnown RBP8.93□□□□□ -0.98
EPHA4-204ENST00000415749 TMC7Q7Z402 723 aa8.93□□□□□ -0.98
EPHA4-204ENST00000415749 USP20Q9Y2K6 914 aa8.93□□□□□ -0.98
EPHA4-204ENST00000415749 KCNMB2Q9Y691 235 aa8.93□□□□□ -0.98
EPHA4-204ENST00000415749 DHX29Q7Z478 1369 aaKnown RBP8.93□□□□□ -0.98
EPHA4-204ENST00000415749 FAM135BQ49AJ0 1406 aa8.93□□□□□ -0.98
EPHA4-204ENST00000415749 SYCP2Q9BX26 1530 aa8.93□□□□□ -0.98
EPHA4-204ENST00000415749 GPATCH8Q9UKJ3 1502 aaKnown RBP8.93□□□□□ -0.98
EPHA4-204ENST00000415749 CDC42BPAQ5VT25 1732 aa8.92□□□□□ -0.98
EPHA4-204ENST00000415749 PLXNC1O60486 1568 aa8.92□□□□□ -0.98
EPHA4-204ENST00000415749 GPR25O00155 361 aa8.92□□□□□ -0.98
EPHA4-204ENST00000415749 VEGFBP49765 207 aa8.92□□□□□ -0.98
EPHA4-204ENST00000415749 CCINQ13939 588 aa8.92□□□□□ -0.98
EPHA4-204ENST00000415749 NPAS4Q8IUM7 802 aa8.92□□□□□ -0.98
EPHA4-204ENST00000415749 PNMA5Q96PV4 448 aa8.92□□□□□ -0.98
EPHA4-204ENST00000415749 UGGT1Q9NYU2 1555 aa8.91□□□□□ -0.98
EPHA4-204ENST00000415749 PLEKHH2Q8IVE3 1493 aa8.91□□□□□ -0.98
EPHA4-204ENST00000415749 NLRP1Q9C000 1473 aa8.91□□□□□ -0.98
EPHA4-204ENST00000415749 ZNF644Q9H582 1327 aaPredicted RBP8.91□□□□□ -0.98
EPHA4-204ENST00000415749 TERTO14746 1132 aaKnown RBP8.91□□□□□ -0.98
EPHA4-204ENST00000415749 CD33P20138 364 aa8.91□□□□□ -0.98
EPHA4-204ENST00000415749 SPEM2Q0P670 501 aa8.91□□□□□ -0.98
EPHA4-204ENST00000415749 COL19A1Q14993 1142 aa8.91□□□□□ -0.98
EPHA4-204ENST00000415749 TRIP4Q15650 581 aaPredicted RBP8.91□□□□□ -0.98
EPHA4-204ENST00000415749 XKR5Q6UX68 686 aa8.91□□□□□ -0.98
EPHA4-204ENST00000415749 ZNF438Q7Z4V0 828 aa8.91□□□□□ -0.98
EPHA4-204ENST00000415749 GGNBP2Q9H3C7 697 aa8.91□□□□□ -0.98
EPHA4-204ENST00000415749 NSFL1CQ9UNZ2 370 aaKnown RBP8.91□□□□□ -0.98
EPHA4-204ENST00000415749 PZPP20742 1482 aa8.9□□□□□ -0.98
EPHA4-204ENST00000415749 VSIG8P0DPA2 414 aa8.9□□□□□ -0.98
EPHA4-204ENST00000415749 GRNP28799 593 aaKnown RBP8.9□□□□□ -0.98
EPHA4-204ENST00000415749 LTKP29376 864 aa8.9□□□□□ -0.98
EPHA4-204ENST00000415749 NLRP13Q86W25 1043 aa8.9□□□□□ -0.98
EPHA4-204ENST00000415749 ALKBH8Q96BT7 664 aaKnown RBP8.9□□□□□ -0.98
EPHA4-204ENST00000415749 DRC1Q96MC2 740 aa8.9□□□□□ -0.98
EPHA4-204ENST00000415749 STRN4Q9NRL3 753 aa8.9□□□□□ -0.98
EPHA4-204ENST00000415749 STRCP1A6NGW2 1772 aa8.9□□□□□ -0.98
EPHA4-204ENST00000415749 DEPDC5O75140 1603 aa8.9□□□□□ -0.99
EPHA4-204ENST00000415749 CCDC18Q5T9S5 1454 aa8.89□□□□□ -0.99
EPHA4-204ENST00000415749 CASKIN1Q8WXD9 1431 aa8.89□□□□□ -0.99
EPHA4-204ENST00000415749 CCNB3Q8WWL7 1395 aa8.89□□□□□ -0.99
EPHA4-204ENST00000415749 LRRIQ1Q96JM4 1722 aa8.89□□□□□ -0.99
EPHA4-204ENST00000415749 TREHO43280 583 aa8.89□□□□□ -0.99
EPHA4-204ENST00000415749 BMP4P12644 408 aa8.89□□□□□ -0.99
EPHA4-204ENST00000415749 MX2P20592 715 aa8.89□□□□□ -0.99
EPHA4-204ENST00000415749 PLCB3Q01970 1234 aa8.89□□□□□ -0.99
EPHA4-204ENST00000415749 IRF7Q92985 503 aa8.89□□□□□ -0.99
EPHA4-204ENST00000415749 GSX2Q9BZM3 304 aa8.89□□□□□ -0.99
EPHA4-204ENST00000415749 PRR12Q9ULL5 1215 aa8.89□□□□□ -0.99
EPHA4-204ENST00000415749 RNF17Q9BXT8 1623 aaKnown RBP8.89□□□□□ -0.99
EPHA4-204ENST00000415749 IQGAP1P46940 1657 aa8.88□□□□□ -0.99
EPHA4-204ENST00000415749 INO80Q9ULG1 1556 aaPredicted RBP8.88□□□□□ -0.99
EPHA4-204ENST00000415749 GPR182O15218 404 aa8.88□□□□□ -0.99
EPHA4-204ENST00000415749 TTC39BQ5VTQ0 682 aaPredicted RBP8.88□□□□□ -0.99
EPHA4-204ENST00000415749 C8orf37Q96NL8 207 aa8.88□□□□□ -0.99
EPHA4-204ENST00000415749 ELP3Q9H9T3 547 aa8.88□□□□□ -0.99
EPHA4-204ENST00000415749 RTEL1-TNFRSF6BF6WH68 1400 aa8.88□□□□□ -0.99
EPHA4-204ENST00000415749 SASH3O75995 380 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms