RNA–Protein interactions for RNA: ENST00000415597.5

LMCD1-203, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 5

Gene LMCD1, Length 870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-203ENST00000415597 G2E3Q7L622 706 aa13.68□□□□□ -0.22
LMCD1-203ENST00000415597 PLA2G12BQ9BX93 195 aa13.68□□□□□ -0.22
LMCD1-203ENST00000415597 MYOZ2Q9NPC6 264 aa13.68□□□□□ -0.22
LMCD1-203ENST00000415597 MED23Q9ULK4 1368 aa13.68□□□□□ -0.22
LMCD1-203ENST00000415597 FANCIQ9NVI1 1328 aa13.67□□□□□ -0.22
LMCD1-203ENST00000415597 ADM5C9JUS6 153 aa13.67□□□□□ -0.22
LMCD1-203ENST00000415597 VAMP4O75379 141 aa13.67□□□□□ -0.22
LMCD1-203ENST00000415597 FKBP1BP68106 108 aa13.67□□□□□ -0.22
LMCD1-203ENST00000415597 IFIT5Q13325 482 aaKnown RBP13.67□□□□□ -0.22
LMCD1-203ENST00000415597 TAF7LQ5H9L4 462 aa13.67□□□□□ -0.22
LMCD1-203ENST00000415597 STRIP1Q5VSL9 837 aa13.67□□□□□ -0.22
LMCD1-203ENST00000415597 ANGEL2Q5VTE6 544 aaKnown RBP13.67□□□□□ -0.22
LMCD1-203ENST00000415597 REM2Q8IYK8 340 aaPredicted RBP13.67□□□□□ -0.22
LMCD1-203ENST00000415597 CHMP3Q9Y3E7 222 aa13.67□□□□□ -0.22
LMCD1-203ENST00000415597 ZNF804BA4D1E1 1349 aa13.66□□□□□ -0.22
LMCD1-203ENST00000415597 EGFRP00533 1210 aa13.66□□□□□ -0.22
LMCD1-203ENST00000415597 EXOSC9Q06265 439 aaKnown RBP13.66□□□□□ -0.22
LMCD1-203ENST00000415597 TTLL5Q6EMB2 1281 aa13.66□□□□□ -0.22
LMCD1-203ENST00000415597 FAM9BQ8IZU0 186 aa13.66□□□□□ -0.22
LMCD1-203ENST00000415597 PITPNM2Q9BZ72 1349 aa13.65□□□□□ -0.22
LMCD1-203ENST00000415597 CSF1RP07333 972 aa13.65□□□□□ -0.22
LMCD1-203ENST00000415597 TTLL12Q14166 644 aaPredicted RBP13.65□□□□□ -0.22
LMCD1-203ENST00000415597 CCDC57Q2TAC2 916 aa13.65□□□□□ -0.22
LMCD1-203ENST00000415597 CDCA5Q96FF9 252 aa13.65□□□□□ -0.22
LMCD1-203ENST00000415597 ABHD8Q96I13 439 aa13.65□□□□□ -0.22
LMCD1-203ENST00000415597 C9orf78Q9NZ63 289 aaPredicted RBP13.65□□□□□ -0.22
LMCD1-203ENST00000415597 FAM161AQ3B820 660 aa13.64□□□□□ -0.23
LMCD1-203ENST00000415597 GMLQ99445 158 aa13.64□□□□□ -0.23
LMCD1-203ENST00000415597 TSKSQ9UJT2 592 aa13.64□□□□□ -0.23
LMCD1-203ENST00000415597 ZNF609O15014 1411 aa13.64□□□□□ -0.23
LMCD1-203ENST00000415597 CCDC85CA6NKD9 419 aa13.63□□□□□ -0.23
LMCD1-203ENST00000415597 KIF23Q02241 960 aaPredicted RBP13.63□□□□□ -0.23
LMCD1-203ENST00000415597 CHRNDQ07001 517 aa13.63□□□□□ -0.23
LMCD1-203ENST00000415597 DACT2Q5SW24 774 aa13.63□□□□□ -0.23
LMCD1-203ENST00000415597 PCNTO95613 3336 aa13.63□□□□□ -0.23
LMCD1-203ENST00000415597 GTF2IP78347 998 aa13.62□□□□□ -0.23
LMCD1-203ENST00000415597 SLC4A10Q6U841 1118 aa13.62□□□□□ -0.23
LMCD1-203ENST00000415597 DLK2Q6UY11 383 aa13.62□□□□□ -0.23
LMCD1-203ENST00000415597 ZNF804AQ7Z570 1209 aa13.62□□□□□ -0.23
LMCD1-203ENST00000415597 CNNM1Q9NRU3 951 aa13.62□□□□□ -0.23
LMCD1-203ENST00000415597 SAGE1Q9NXZ1 904 aa13.62□□□□□ -0.23
LMCD1-203ENST00000415597 F6X3S4 739 aa13.61□□□□□ -0.23
LMCD1-203ENST00000415597 GRM8O00222 908 aa13.61□□□□□ -0.23
LMCD1-203ENST00000415597 MYO1BO43795 1136 aa13.61□□□□□ -0.23
LMCD1-203ENST00000415597 ALDH1L1O75891 902 aa13.61□□□□□ -0.23
LMCD1-203ENST00000415597 BEND3Q5T5X7 828 aa13.61□□□□□ -0.23
LMCD1-203ENST00000415597 LDHAL6AQ6ZMR3 332 aa13.61□□□□□ -0.23
LMCD1-203ENST00000415597 ARMC9Q7Z3E5 817 aa13.61□□□□□ -0.23
LMCD1-203ENST00000415597 APOBEC3FQ8IUX4 373 aaKnown RBP13.61□□□□□ -0.23
LMCD1-203ENST00000415597 SRCIN1Q9C0H9 1055 aa13.61□□□□□ -0.23
LMCD1-203ENST00000415597 WNT10BO00744 389 aa13.6□□□□□ -0.23
LMCD1-203ENST00000415597 SLC10A3P09131 477 aa13.6□□□□□ -0.23
LMCD1-203ENST00000415597 CASP7P55210 303 aa13.6□□□□□ -0.23
LMCD1-203ENST00000415597 DGKZQ13574 1117 aa13.6□□□□□ -0.23
LMCD1-203ENST00000415597 DLGAP5Q15398 846 aa13.6□□□□□ -0.23
LMCD1-203ENST00000415597 NBPF9Q3BBW0 867 aa13.6□□□□□ -0.23
LMCD1-203ENST00000415597 LMBR1LQ6UX01 489 aa13.6□□□□□ -0.23
LMCD1-203ENST00000415597 KIAA0825Q8IV33 1275 aa13.6□□□□□ -0.23
LMCD1-203ENST00000415597 CD209Q9NNX6 404 aa13.6□□□□□ -0.23
LMCD1-203ENST00000415597 ASTN2O75129 1339 aaPredicted RBP13.6□□□□□ -0.23
LMCD1-203ENST00000415597 FAM155AB1AL88 458 aaPredicted RBP13.59□□□□□ -0.23
LMCD1-203ENST00000415597 PLIN1O60240 522 aa13.59□□□□□ -0.23
LMCD1-203ENST00000415597 TRPA1O75762 1119 aa13.59□□□□□ -0.23
LMCD1-203ENST00000415597 CACNA1FO60840 1977 aa13.59□□□□□ -0.23
LMCD1-203ENST00000415597 POLR2AP24928 1970 aaKnown RBP13.58□□□□□ -0.24
LMCD1-203ENST00000415597 WTIPA6NIX2 430 aaPredicted RBP13.58□□□□□ -0.24
LMCD1-203ENST00000415597 TAF5LO75529 589 aa13.58□□□□□ -0.24
LMCD1-203ENST00000415597 FOXO4P98177 505 aa13.58□□□□□ -0.24
LMCD1-203ENST00000415597 C15orf52Q6ZUT6 534 aaKnown RBP13.58□□□□□ -0.24
LMCD1-203ENST00000415597 TXNRD3Q86VQ6 643 aa13.58□□□□□ -0.24
LMCD1-203ENST00000415597 HELBQ8NG08 1087 aaPredicted RBP13.58□□□□□ -0.24
LMCD1-203ENST00000415597 ZIC5Q96T25 663 aa13.58□□□□□ -0.24
LMCD1-203ENST00000415597 MXD3Q9BW11 206 aa13.58□□□□□ -0.24
LMCD1-203ENST00000415597 MCOLN1Q9GZU1 580 aa13.58□□□□□ -0.24
LMCD1-203ENST00000415597 RNF186Q9NXI6 227 aa13.58□□□□□ -0.24
LMCD1-203ENST00000415597 COL4A1P02462 1669 aa13.58□□□□□ -0.24
LMCD1-203ENST00000415597 MYH3P11055 1940 aa13.58□□□□□ -0.24
LMCD1-203ENST00000415597 THSD7BQ9C0I4 1608 aa13.57□□□□□ -0.24
LMCD1-203ENST00000415597 UBE2Q2LH0YL09 131 aa13.57□□□□□ -0.24
LMCD1-203ENST00000415597 PPP1R12BO60237 982 aaPredicted RBP13.57□□□□□ -0.24
LMCD1-203ENST00000415597 CSRNP1Q96S65 589 aa13.57□□□□□ -0.24
LMCD1-203ENST00000415597 SCN9AQ15858 1988 aa13.57□□□□□ -0.24
LMCD1-203ENST00000415597 SASH1O94885 1247 aa13.56□□□□□ -0.24
LMCD1-203ENST00000415597 RBM5P52756 815 aaKnown RBP eCLIP13.56□□□□□ -0.24
LMCD1-203ENST00000415597 FKBP1AP62942 108 aaKnown RBP13.56□□□□□ -0.24
LMCD1-203ENST00000415597 SREBF2Q12772 1141 aa13.56□□□□□ -0.24
LMCD1-203ENST00000415597 SUPT20HL1Q3ZLR7 823 aa13.56□□□□□ -0.24
LMCD1-203ENST00000415597 PRAMEF18Q5VWM3 479 aa13.56□□□□□ -0.24
LMCD1-203ENST00000415597 VPS37DQ86XT2 251 aa13.56□□□□□ -0.24
LMCD1-203ENST00000415597 RASAL3Q86YV0 1011 aa13.56□□□□□ -0.24
LMCD1-203ENST00000415597 PPP2R3BQ9Y5P8 575 aa13.56□□□□□ -0.24
LMCD1-203ENST00000415597 E9PSI1 815 aa13.55□□□□□ -0.24
LMCD1-203ENST00000415597 FRAT2O75474 233 aaPredicted RBP13.55□□□□□ -0.24
LMCD1-203ENST00000415597 IL1R1P14778 569 aa13.55□□□□□ -0.24
LMCD1-203ENST00000415597 KLRK1P26718 216 aa13.55□□□□□ -0.24
LMCD1-203ENST00000415597 MLLT1Q03111 559 aaPredicted RBP13.55□□□□□ -0.24
LMCD1-203ENST00000415597 UBE4AQ14139 1066 aa13.55□□□□□ -0.24
LMCD1-203ENST00000415597 SPINK5Q9NQ38 1064 aaPredicted RBP13.55□□□□□ -0.24
LMCD1-203ENST00000415597 SCAF8Q9UPN6 1271 aaKnown RBP13.55□□□□□ -0.24
LMCD1-203ENST00000415597 F8W031 263 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms