RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 AP5Z1O43299 807 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 TYRO3Q06418 890 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 JAKMIP3Q5VZ66 844 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 TTLL5Q6EMB2 1281 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 TICAM2Q86XR7 235 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 ERC1Q8IUD2 1116 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 ADAM21Q9UKJ8 722 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 FER1L4A9Z1Z3 1794 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 ZRANB2O95218 330 aaKnown RBP eCLIP9.06□□□□□ -0.96
SIK3-203ENST00000415541 SMC2O95347 1197 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 CORO7P57737 925 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 CWC27Q6UX04 472 aaKnown RBP9.06□□□□□ -0.96
SIK3-203ENST00000415541 TNMDQ9H2S6 317 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 BOLA2Q9H3K6 86 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 DCTPP1Q9H773 170 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 CNNM1Q9NRU3 951 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 C1orf167Q5SNV9 1468 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 PNMA6EA0A0J9YXQ4 647 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 GRM8O00222 908 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 RDXP35241 583 aaKnown RBP9.06□□□□□ -0.96
SIK3-203ENST00000415541 EIF5P55010 431 aaKnown RBP9.06□□□□□ -0.96
SIK3-203ENST00000415541 ANAPC15P60006 121 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 ATP8B2P98198 1209 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 CCDC158Q5M9N0 1113 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 LUZP1Q86V48 1076 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 PLEKHM2Q8IWE5 1019 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 CCAR2Q8N163 923 aaKnown RBP9.06□□□□□ -0.96
SIK3-203ENST00000415541 DDX11Q96FC9 970 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 NRBP1Q9UHY1 535 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 TBC1D2BQ9UPU7 963 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 USP31Q70CQ4 1352 aa9.06□□□□□ -0.96
SIK3-203ENST00000415541 OVOS2A0A0J9YW53 1432 aa9.05□□□□□ -0.96
SIK3-203ENST00000415541 OVOS2Q6IE36 1432 aa9.05□□□□□ -0.96
SIK3-203ENST00000415541 HSP90B2PQ58FF3 399 aa9.05□□□□□ -0.96
SIK3-203ENST00000415541 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.05□□□□□ -0.96
SIK3-203ENST00000415541 PLA2G4DQ86XP0 818 aa9.05□□□□□ -0.96
SIK3-203ENST00000415541 MICALL1Q8N3F8 863 aa9.05□□□□□ -0.96
SIK3-203ENST00000415541 LINS1Q8NG48 757 aa9.05□□□□□ -0.96
SIK3-203ENST00000415541 L2HGDHQ9H9P8 463 aa9.05□□□□□ -0.96
SIK3-203ENST00000415541 PCDH11XQ9BZA7 1347 aa9.05□□□□□ -0.96
SIK3-203ENST00000415541 PCDH11YQ9BZA8 1340 aa9.05□□□□□ -0.96
SIK3-203ENST00000415541 DIP2AQ14689 1571 aa9.05□□□□□ -0.96
SIK3-203ENST00000415541 GNL2Q13823 731 aaKnown RBP9.05□□□□□ -0.96
SIK3-203ENST00000415541 PPP2R5AQ15172 486 aa9.05□□□□□ -0.96
SIK3-203ENST00000415541 ACBD3Q9H3P7 528 aa9.05□□□□□ -0.96
SIK3-203ENST00000415541 RHPN1Q8TCX5 695 aa9.05□□□□□ -0.96
SIK3-203ENST00000415541 ORC3Q9UBD5 711 aaPredicted RBP9.05□□□□□ -0.96
SIK3-203ENST00000415541 GSPT1P15170 499 aaKnown RBP9.04□□□□□ -0.96
SIK3-203ENST00000415541 WASHC4Q2M389 1173 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 GBP6Q6ZN66 633 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 TDRD7Q8NHU6 1098 aaKnown RBP9.04□□□□□ -0.96
SIK3-203ENST00000415541 KLHDC4Q8TBB5 520 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 CBX8Q9HC52 389 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 CEP126Q9P2H0 1117 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 SMC3Q9UQE7 1217 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 ABCC4O15439 1325 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 SETD1AO15047 1707 aaKnown RBP9.04□□□□□ -0.96
SIK3-203ENST00000415541 CCDC69A6NI79 296 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 BECN2A8MW95 431 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 CPP00450 1065 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 ANO6Q4KMQ2 910 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 DNAJC21Q5F1R6 531 aaKnown RBP9.04□□□□□ -0.96
SIK3-203ENST00000415541 TRMT112Q9UI30 125 aaKnown RBP9.04□□□□□ -0.96
SIK3-203ENST00000415541 EFCAB8A8MWE9 144 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 ZKSCAN1P17029 563 aaPredicted RBP9.04□□□□□ -0.96
SIK3-203ENST00000415541 SDSP20132 328 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 ZNF165P49910 485 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 FKBP4Q02790 459 aaKnown RBP eCLIP9.04□□□□□ -0.96
SIK3-203ENST00000415541 LMBR1LQ6UX01 489 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 TADA2BQ86TJ2 420 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 DNAJC10Q8IXB1 793 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 USP44Q9H0E7 712 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 BABAM1Q9NWV8 329 aa9.04□□□□□ -0.96
SIK3-203ENST00000415541 CYP27B1O15528 508 aa9.03□□□□□ -0.96
SIK3-203ENST00000415541 STX6O43752 255 aa9.03□□□□□ -0.96
SIK3-203ENST00000415541 RPS6KA5O75582 802 aa9.03□□□□□ -0.96
SIK3-203ENST00000415541 ERCC3P19447 782 aa9.03□□□□□ -0.96
SIK3-203ENST00000415541 FAM98CQ17RN3 349 aaKnown RBP9.03□□□□□ -0.96
SIK3-203ENST00000415541 TMED8Q6PL24 325 aaPredicted RBP9.03□□□□□ -0.96
SIK3-203ENST00000415541 FMNL3Q8IVF7 1028 aa9.03□□□□□ -0.96
SIK3-203ENST00000415541 ZCCHC17Q9NP64 241 aaKnown RBP9.03□□□□□ -0.96
SIK3-203ENST00000415541 DDX19AQ9NUU7 478 aaKnown RBP9.03□□□□□ -0.96
SIK3-203ENST00000415541 CWC25Q9NXE8 425 aaPredicted RBP9.03□□□□□ -0.96
SIK3-203ENST00000415541 PDE1AP54750 535 aa9.03□□□□□ -0.96
SIK3-203ENST00000415541 RNF217Q8TC41 542 aa9.03□□□□□ -0.96
SIK3-203ENST00000415541 CCDC34Q96HJ3 373 aa9.03□□□□□ -0.96
SIK3-203ENST00000415541 MRFAP1L1Q96HT8 127 aa9.03□□□□□ -0.96
SIK3-203ENST00000415541 PDRG1Q9NUG6 133 aa9.03□□□□□ -0.96
SIK3-203ENST00000415541 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.03□□□□□ -0.96
SIK3-203ENST00000415541 RTL1A6NKG5 1358 aa9.03□□□□□ -0.96
SIK3-203ENST00000415541 ARHGAP23Q9P227 1491 aa9.03□□□□□ -0.96
SIK3-203ENST00000415541 RAB11FIP3O75154 756 aa9.03□□□□□ -0.96
SIK3-203ENST00000415541 F13A1P00488 732 aa9.03□□□□□ -0.96
SIK3-203ENST00000415541 VPS37DQ86XT2 251 aa9.03□□□□□ -0.96
SIK3-203ENST00000415541 GPR161Q8N6U8 529 aaKnown RBP9.03□□□□□ -0.96
SIK3-203ENST00000415541 MRVI1Q9Y6F6 885 aa9.03□□□□□ -0.96
SIK3-203ENST00000415541 ALDH1L1O75891 902 aa9.02□□□□□ -0.96
SIK3-203ENST00000415541 ERLIN2O94905 339 aa9.02□□□□□ -0.96
SIK3-203ENST00000415541 CLSTN1O94985 981 aa9.02□□□□□ -0.96
SIK3-203ENST00000415541 NBPF11Q86T75 865 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms