RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 IGF2BP3O00425 579 aaKnown RBP eCLIP8.23□□□□□ -1.09
LMBR1-204ENST00000415428 EGFRP00533 1210 aa8.23□□□□□ -1.09
LMBR1-204ENST00000415428 PCCAP05165 728 aaPredicted RBP8.23□□□□□ -1.09
LMBR1-204ENST00000415428 TEPSINQ96N21 525 aa8.23□□□□□ -1.09
LMBR1-204ENST00000415428 GGA3Q9NZ52 723 aa8.23□□□□□ -1.09
LMBR1-204ENST00000415428 USP17L3A6NCW0 530 aa8.23□□□□□ -1.09
LMBR1-204ENST00000415428 USP17L4A6NCW7 530 aa8.23□□□□□ -1.09
LMBR1-204ENST00000415428 TRPA1O75762 1119 aa8.23□□□□□ -1.09
LMBR1-204ENST00000415428 USP17L1Q7RTZ2 530 aa8.23□□□□□ -1.09
LMBR1-204ENST00000415428 HTATIP2Q9BUP3 242 aa8.23□□□□□ -1.09
LMBR1-204ENST00000415428 RBM27Q9P2N5 1060 aaKnown RBP8.23□□□□□ -1.09
LMBR1-204ENST00000415428 PHACTR3Q96KR7 559 aa8.22□□□□□ -1.09
LMBR1-204ENST00000415428 BSDC1Q9NW68 430 aaPredicted RBP8.22□□□□□ -1.09
LMBR1-204ENST00000415428 NPM3O75607 178 aaKnown RBP8.22□□□□□ -1.09
LMBR1-204ENST00000415428 PLA2G5P39877 138 aa8.22□□□□□ -1.09
LMBR1-204ENST00000415428 NBPF11Q86T75 865 aa8.22□□□□□ -1.09
LMBR1-204ENST00000415428 ZBTB38Q8NAP3 1195 aaPredicted RBP8.22□□□□□ -1.09
LMBR1-204ENST00000415428 R3HDMLQ9H3Y0 253 aa8.22□□□□□ -1.09
LMBR1-204ENST00000415428 PDS5AQ29RF7 1337 aaKnown RBP8.22□□□□□ -1.09
LMBR1-204ENST00000415428 SPDYE5A6NIY4 337 aa8.22□□□□□ -1.09
LMBR1-204ENST00000415428 H0YGN5 161 aa8.22□□□□□ -1.09
LMBR1-204ENST00000415428 CHL1O00533 1208 aa8.22□□□□□ -1.09
LMBR1-204ENST00000415428 WASHC4Q2M389 1173 aa8.22□□□□□ -1.09
LMBR1-204ENST00000415428 OTUD7BQ6GQQ9 843 aa8.22□□□□□ -1.09
LMBR1-204ENST00000415428 PTPN18Q99952 460 aa8.22□□□□□ -1.09
LMBR1-204ENST00000415428 MTMR10Q9NXD2 777 aa8.22□□□□□ -1.09
LMBR1-204ENST00000415428 GOLGB1Q14789 3259 aaKnown RBP8.21□□□□□ -1.09
LMBR1-204ENST00000415428 USP17L8P0C7I0 530 aa8.21□□□□□ -1.09
LMBR1-204ENST00000415428 SLAIN1Q8ND83 568 aa8.21□□□□□ -1.09
LMBR1-204ENST00000415428 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.21□□□□□ -1.09
LMBR1-204ENST00000415428 GJA3Q9Y6H8 435 aa8.21□□□□□ -1.09
LMBR1-204ENST00000415428 SHTN1A0MZ66 631 aa8.21□□□□□ -1.1
LMBR1-204ENST00000415428 BCRP11274 1271 aa8.21□□□□□ -1.1
LMBR1-204ENST00000415428 NFE2L2Q16236 605 aa8.21□□□□□ -1.1
LMBR1-204ENST00000415428 MAP3K21Q5TCX8 1036 aa8.21□□□□□ -1.1
LMBR1-204ENST00000415428 PNNQ9H307 717 aaKnown RBP8.21□□□□□ -1.1
LMBR1-204ENST00000415428 TAOK2Q9UL54 1235 aa8.21□□□□□ -1.1
LMBR1-204ENST00000415428 CSF1RP07333 972 aa8.2□□□□□ -1.1
LMBR1-204ENST00000415428 CASP7P55210 303 aa8.2□□□□□ -1.1
LMBR1-204ENST00000415428 EIF4G2P78344 907 aaKnown RBP eCLIP8.2□□□□□ -1.1
LMBR1-204ENST00000415428 SP3Q02447 781 aa8.2□□□□□ -1.1
LMBR1-204ENST00000415428 PPIL2Q13356 520 aa8.2□□□□□ -1.1
LMBR1-204ENST00000415428 TTLL7Q6ZT98 887 aa8.2□□□□□ -1.1
LMBR1-204ENST00000415428 WNT10BO00744 389 aa8.2□□□□□ -1.1
LMBR1-204ENST00000415428 USP2O75604 605 aaPredicted RBP8.2□□□□□ -1.1
LMBR1-204ENST00000415428 MAP4K4O95819 1239 aaPredicted RBP8.2□□□□□ -1.1
LMBR1-204ENST00000415428 GTF2A2P52657 109 aa8.2□□□□□ -1.1
LMBR1-204ENST00000415428 PTPN12Q05209 780 aaKnown RBP8.2□□□□□ -1.1
LMBR1-204ENST00000415428 DDX46Q7L014 1031 aaKnown RBP8.2□□□□□ -1.1
LMBR1-204ENST00000415428 TLR2O60603 784 aa8.2□□□□□ -1.1
LMBR1-204ENST00000415428 FAM83AQ86UY5 434 aa8.2□□□□□ -1.1
LMBR1-204ENST00000415428 SNX17Q15036 470 aa8.19□□□□□ -1.1
LMBR1-204ENST00000415428 CCDC191Q8NCU4 936 aa8.19□□□□□ -1.1
LMBR1-204ENST00000415428 TSKSQ9UJT2 592 aa8.19□□□□□ -1.1
LMBR1-204ENST00000415428 GREB1LQ9C091 1923 aaPredicted RBP8.19□□□□□ -1.1
LMBR1-204ENST00000415428 SPDYE2Q495Y8 402 aa8.19□□□□□ -1.1
LMBR1-204ENST00000415428 TRMT44Q8IYL2 757 aaKnown RBP8.19□□□□□ -1.1
LMBR1-204ENST00000415428 SYMPKQ92797 1274 aaKnown RBP8.19□□□□□ -1.1
LMBR1-204ENST00000415428 SERPINA10Q9UK55 444 aa8.19□□□□□ -1.1
LMBR1-204ENST00000415428 KNSTRNQ9Y448 316 aa8.19□□□□□ -1.1
LMBR1-204ENST00000415428 POU3F3P20264 500 aaPredicted RBP8.19□□□□□ -1.1
LMBR1-204ENST00000415428 LACTBP83111 547 aaPredicted RBP8.19□□□□□ -1.1
LMBR1-204ENST00000415428 ANGEL2Q5VTE6 544 aaKnown RBP8.19□□□□□ -1.1
LMBR1-204ENST00000415428 CHMP4AQ9BY43 222 aa8.19□□□□□ -1.1
LMBR1-204ENST00000415428 OGDHLQ9ULD0 1010 aa8.19□□□□□ -1.1
LMBR1-204ENST00000415428 RPTORQ8N122 1335 aa8.18□□□□□ -1.1
LMBR1-204ENST00000415428 CRHR2Q13324 411 aa8.18□□□□□ -1.1
LMBR1-204ENST00000415428 ANKRD13AQ8IZ07 590 aa8.18□□□□□ -1.1
LMBR1-204ENST00000415428 BCL2L13Q9BXK5 485 aa8.18□□□□□ -1.1
LMBR1-204ENST00000415428 TBC1D8O95759 1140 aa8.18□□□□□ -1.1
LMBR1-204ENST00000415428 EN2P19622 333 aaPredicted RBP8.18□□□□□ -1.1
LMBR1-204ENST00000415428 COL25A1Q9BXS0 654 aaPredicted RBP8.18□□□□□ -1.1
LMBR1-204ENST00000415428 NKX3-2P78367 333 aa8.17□□□□□ -1.1
LMBR1-204ENST00000415428 SRRDQ9UH36 339 aa8.17□□□□□ -1.1
LMBR1-204ENST00000415428 HSPA5P11021 654 aaKnown RBP8.17□□□□□ -1.1
LMBR1-204ENST00000415428 SMAD3P84022 425 aaKnown RBP8.17□□□□□ -1.1
LMBR1-204ENST00000415428 HOOK2Q96ED9 719 aa8.17□□□□□ -1.1
LMBR1-204ENST00000415428 TMX4Q9H1E5 349 aaPredicted RBP8.17□□□□□ -1.1
LMBR1-204ENST00000415428 SOX1O00570 391 aaPredicted RBP8.17□□□□□ -1.1
LMBR1-204ENST00000415428 NF2P35240 595 aa8.17□□□□□ -1.1
LMBR1-204ENST00000415428 SUPT20HL1Q3ZLR7 823 aa8.17□□□□□ -1.1
LMBR1-204ENST00000415428 HDAC9Q9UKV0 1011 aa8.17□□□□□ -1.1
LMBR1-204ENST00000415428 RPS8P62241 208 aaKnown RBP8.16□□□□□ -1.1
LMBR1-204ENST00000415428 EFCC1Q9HA90 598 aa8.16□□□□□ -1.1
LMBR1-204ENST00000415428 ZFYVE28Q9HCC9 887 aa8.16□□□□□ -1.1
LMBR1-204ENST00000415428 HYPKQ9NX55 129 aa8.16□□□□□ -1.1
LMBR1-204ENST00000415428 GGA1Q9UJY5 639 aa8.16□□□□□ -1.1
LMBR1-204ENST00000415428 TANC1Q9C0D5 1861 aa8.16□□□□□ -1.1
LMBR1-204ENST00000415428 PDE8AO60658 829 aa8.16□□□□□ -1.1
LMBR1-204ENST00000415428 PPATQ06203 517 aa8.16□□□□□ -1.1
LMBR1-204ENST00000415428 USP6NLQ92738 828 aa8.16□□□□□ -1.1
LMBR1-204ENST00000415428 UTYO14607 1347 aa8.16□□□□□ -1.1
LMBR1-204ENST00000415428 SALL1Q9NSC2 1324 aa8.16□□□□□ -1.1
LMBR1-204ENST00000415428 KMT2EQ8IZD2 1858 aa8.16□□□□□ -1.1
LMBR1-204ENST00000415428 COL4A4P53420 1690 aaPredicted RBP8.16□□□□□ -1.1
LMBR1-204ENST00000415428 SPDYE2BA6NHP3 402 aa8.16□□□□□ -1.1
LMBR1-204ENST00000415428 SPDYE6P0CI01 402 aa8.16□□□□□ -1.1
LMBR1-204ENST00000415428 GINM1Q9NU53 330 aa8.16□□□□□ -1.1
LMBR1-204ENST00000415428 SGPL1O95470 568 aa8.15□□□□□ -1.1
LMBR1-204ENST00000415428 BRI3BPQ8WY22 251 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms