RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 ARFGEF2Q9Y6D5 1785 aa11.81□□□□□ -0.52
LINC01888-201ENST00000415138 FLIIQ13045 1269 aa11.8□□□□□ -0.52
LINC01888-201ENST00000415138 PADI6Q6TGC4 694 aa11.8□□□□□ -0.52
LINC01888-201ENST00000415138 KSR2Q6VAB6 950 aa11.8□□□□□ -0.52
LINC01888-201ENST00000415138 PPP1R42Q7Z4L9 355 aa11.8□□□□□ -0.52
LINC01888-201ENST00000415138 NPDC1Q9NQX5 325 aaPredicted RBP11.8□□□□□ -0.52
LINC01888-201ENST00000415138 FAM177BA6PVY3 158 aa11.79□□□□□ -0.52
LINC01888-201ENST00000415138 C3orf80F5H4A9 247 aa11.79□□□□□ -0.52
LINC01888-201ENST00000415138 IPO8O15397 1037 aaKnown RBP11.79□□□□□ -0.52
LINC01888-201ENST00000415138 ITGBL1O95965 494 aaPredicted RBP11.79□□□□□ -0.52
LINC01888-201ENST00000415138 NFIXQ14938 502 aa11.79□□□□□ -0.52
LINC01888-201ENST00000415138 HLFQ16534 295 aa11.79□□□□□ -0.52
LINC01888-201ENST00000415138 TBC1D9BQ66K14 1250 aa11.79□□□□□ -0.52
LINC01888-201ENST00000415138 TPTE2Q6XPS3 522 aa11.79□□□□□ -0.52
LINC01888-201ENST00000415138 NBPF5PQ86XG9 351 aaPredicted RBP11.79□□□□□ -0.52
LINC01888-201ENST00000415138 SSH1Q8WYL5 1049 aa11.79□□□□□ -0.52
LINC01888-201ENST00000415138 BCL2L13Q9BXK5 485 aa11.79□□□□□ -0.52
LINC01888-201ENST00000415138 NYXQ9GZU5 481 aa11.79□□□□□ -0.52
LINC01888-201ENST00000415138 MAP3K2Q9Y2U5 619 aa11.79□□□□□ -0.52
LINC01888-201ENST00000415138 COL24A1Q17RW2 1714 aa11.79□□□□□ -0.52
LINC01888-201ENST00000415138 CARMIL3Q8ND23 1372 aa11.79□□□□□ -0.52
LINC01888-201ENST00000415138 PI4KAP2A4QPH2 592 aa11.78□□□□□ -0.52
LINC01888-201ENST00000415138 LETM1O95202 739 aaPredicted RBP11.78□□□□□ -0.52
LINC01888-201ENST00000415138 SERPINB2P05120 415 aa11.78□□□□□ -0.52
LINC01888-201ENST00000415138 GPTP24298 496 aa11.78□□□□□ -0.52
LINC01888-201ENST00000415138 TM4SF1P30408 202 aa11.78□□□□□ -0.52
LINC01888-201ENST00000415138 ST5P78524 1137 aa11.78□□□□□ -0.52
LINC01888-201ENST00000415138 TCIRG1Q13488 830 aa11.78□□□□□ -0.52
LINC01888-201ENST00000415138 PARP10Q53GL7 1025 aa11.78□□□□□ -0.52
LINC01888-201ENST00000415138 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.78□□□□□ -0.52
LINC01888-201ENST00000415138 G2E3Q7L622 706 aa11.78□□□□□ -0.52
LINC01888-201ENST00000415138 PI4KAP1Q8N8J0 262 aa11.78□□□□□ -0.52
LINC01888-201ENST00000415138 MYD88Q99836 296 aa11.78□□□□□ -0.52
LINC01888-201ENST00000415138 GTPBP4Q9BZE4 634 aaKnown RBP11.78□□□□□ -0.52
LINC01888-201ENST00000415138 PTPRCP08575 1304 aa11.78□□□□□ -0.52
LINC01888-201ENST00000415138 RARSP54136 660 aaKnown RBP11.77□□□□□ -0.53
LINC01888-201ENST00000415138 SLC4A10Q6U841 1118 aa11.77□□□□□ -0.53
LINC01888-201ENST00000415138 LRP10Q7Z4F1 713 aa11.77□□□□□ -0.53
LINC01888-201ENST00000415138 CEP120Q8N960 986 aa11.77□□□□□ -0.53
LINC01888-201ENST00000415138 PLCD4Q9BRC7 762 aa11.77□□□□□ -0.53
LINC01888-201ENST00000415138 METTL22Q9BUU2 404 aaPredicted RBP11.77□□□□□ -0.53
LINC01888-201ENST00000415138 LRP5O75197 1615 aa11.77□□□□□ -0.53
LINC01888-201ENST00000415138 KIF16BQ96L93 1317 aa11.77□□□□□ -0.53
LINC01888-201ENST00000415138 FAM193AP78312 1265 aa11.76□□□□□ -0.53
LINC01888-201ENST00000415138 KCNC4Q03721 635 aa11.76□□□□□ -0.53
LINC01888-201ENST00000415138 CNBD1Q8NA66 436 aa11.76□□□□□ -0.53
LINC01888-201ENST00000415138 TTC13Q8NBP0 860 aa11.76□□□□□ -0.53
LINC01888-201ENST00000415138 DNAAF4Q8WXU2 420 aa11.76□□□□□ -0.53
LINC01888-201ENST00000415138 ZNF830Q96NB3 372 aaPredicted RBP11.76□□□□□ -0.53
LINC01888-201ENST00000415138 UTP14AQ9BVJ6 771 aaKnown RBP11.76□□□□□ -0.53
LINC01888-201ENST00000415138 API5Q9BZZ5 524 aaKnown RBP11.76□□□□□ -0.53
LINC01888-201ENST00000415138 ATP5J2-PTCD1G3V325 749 aa11.75□□□□□ -0.53
LINC01888-201ENST00000415138 POLRMTO00411 1230 aaKnown RBP11.75□□□□□ -0.53
LINC01888-201ENST00000415138 RNF40O75150 1001 aa11.75□□□□□ -0.53
LINC01888-201ENST00000415138 RGS20O76081 388 aa11.75□□□□□ -0.53
LINC01888-201ENST00000415138 SETQ01105 290 aaPredicted RBP11.75□□□□□ -0.53
LINC01888-201ENST00000415138 ZNF34Q8IZ26 560 aa11.75□□□□□ -0.53
LINC01888-201ENST00000415138 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.75□□□□□ -0.53
LINC01888-201ENST00000415138 TRMT112Q9UI30 125 aaKnown RBP11.75□□□□□ -0.53
LINC01888-201ENST00000415138 RCAN3Q9UKA8 241 aa11.75□□□□□ -0.53
LINC01888-201ENST00000415138 NOB1Q9ULX3 412 aaKnown RBP11.75□□□□□ -0.53
LINC01888-201ENST00000415138 ATP10DQ9P241 1426 aa11.75□□□□□ -0.53
LINC01888-201ENST00000415138 MS4A1P11836 297 aa11.74□□□□□ -0.53
LINC01888-201ENST00000415138 PDE6BP35913 854 aa11.74□□□□□ -0.53
LINC01888-201ENST00000415138 DDR1Q08345 913 aa11.74□□□□□ -0.53
LINC01888-201ENST00000415138 TMEM132AQ24JP5 1023 aa11.74□□□□□ -0.53
LINC01888-201ENST00000415138 CCDC191Q8NCU4 936 aa11.74□□□□□ -0.53
LINC01888-201ENST00000415138 YY1AP1Q9H869 796 aa11.74□□□□□ -0.53
LINC01888-201ENST00000415138 CWC25Q9NXE8 425 aaPredicted RBP11.74□□□□□ -0.53
LINC01888-201ENST00000415138 CD2APQ9Y5K6 639 aa11.74□□□□□ -0.53
LINC01888-201ENST00000415138 F6X3S4 739 aa11.73□□□□□ -0.53
LINC01888-201ENST00000415138 BCAR3O75815 825 aa11.73□□□□□ -0.53
LINC01888-201ENST00000415138 BRPF1P55201 1214 aaPredicted RBP11.73□□□□□ -0.53
LINC01888-201ENST00000415138 SUSD4Q5VX71 490 aa11.73□□□□□ -0.53
LINC01888-201ENST00000415138 ZKSCAN2Q63HK3 967 aa11.73□□□□□ -0.53
LINC01888-201ENST00000415138 NLRP10Q86W26 655 aa11.73□□□□□ -0.53
LINC01888-201ENST00000415138 ARHGAP45Q92619 1136 aa11.73□□□□□ -0.53
LINC01888-201ENST00000415138 SRCIN1Q9C0H9 1055 aa11.73□□□□□ -0.53
LINC01888-201ENST00000415138 PDZRN3Q9UPQ7 1066 aa11.73□□□□□ -0.53
LINC01888-201ENST00000415138 NRXN2Q9P2S2 1712 aa11.72□□□□□ -0.53
LINC01888-201ENST00000415138 ADCY9O60503 1353 aa11.72□□□□□ -0.53
LINC01888-201ENST00000415138 RNF123Q5XPI4 1314 aa11.72□□□□□ -0.53
LINC01888-201ENST00000415138 SH3TC1Q8TE82 1336 aa11.72□□□□□ -0.53
LINC01888-201ENST00000415138 H0YIN7 160 aa11.72□□□□□ -0.53
LINC01888-201ENST00000415138 SEMA3EO15041 775 aa11.72□□□□□ -0.53
LINC01888-201ENST00000415138 TGFB2P61812 414 aa11.72□□□□□ -0.53
LINC01888-201ENST00000415138 TRIM28Q13263 835 aaKnown RBP11.72□□□□□ -0.53
LINC01888-201ENST00000415138 NFKBIBQ15653 356 aa11.72□□□□□ -0.53
LINC01888-201ENST00000415138 PRR5LQ6MZQ0 368 aa11.72□□□□□ -0.53
LINC01888-201ENST00000415138 LINS1Q8NG48 757 aa11.72□□□□□ -0.53
LINC01888-201ENST00000415138 NLRP3Q96P20 1036 aa11.72□□□□□ -0.53
LINC01888-201ENST00000415138 ISCA1Q9BUE6 129 aa11.72□□□□□ -0.53
LINC01888-201ENST00000415138 FHDC1Q9C0D6 1143 aaPredicted RBP11.72□□□□□ -0.53
LINC01888-201ENST00000415138 C9orf78Q9NZ63 289 aaPredicted RBP11.72□□□□□ -0.53
LINC01888-201ENST00000415138 KIF13BQ9NQT8 1826 aa11.72□□□□□ -0.53
LINC01888-201ENST00000415138 CCT4P50991 539 aaKnown RBP11.71□□□□□ -0.53
LINC01888-201ENST00000415138 PTGDRQ13258 359 aa11.71□□□□□ -0.53
LINC01888-201ENST00000415138 NUTM1Q86Y26 1132 aa11.71□□□□□ -0.53
LINC01888-201ENST00000415138 BRIP1Q9BX63 1249 aa11.71□□□□□ -0.53
LINC01888-201ENST00000415138 HDAC5Q9UQL6 1122 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms