RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 SLC5A1P13866 664 aa18.91■□□□□ 0.62
SHMT2-202ENST00000414700 ATP5JP18859 108 aa18.91■□□□□ 0.62
SHMT2-202ENST00000414700 KCNA3P22001 575 aa18.91■□□□□ 0.62
SHMT2-202ENST00000414700 PHKA1P46020 1223 aa18.91■□□□□ 0.62
SHMT2-202ENST00000414700 SCARF1Q14162 830 aa18.91■□□□□ 0.62
SHMT2-202ENST00000414700 GORABQ5T7V8 394 aa18.91■□□□□ 0.62
SHMT2-202ENST00000414700 STYK1Q6J9G0 422 aa18.91■□□□□ 0.62
SHMT2-202ENST00000414700 PRPF40BQ6NWY9 871 aaKnown RBP18.91■□□□□ 0.62
SHMT2-202ENST00000414700 PPP1R1BQ9UD71 204 aaPredicted RBP18.91■□□□□ 0.62
SHMT2-202ENST00000414700 NSFL1CQ9UNZ2 370 aaKnown RBP18.91■□□□□ 0.62
SHMT2-202ENST00000414700 AKAP11Q9UKA4 1901 aa18.9■□□□□ 0.62
SHMT2-202ENST00000414700 LTBP1Q14766 1721 aa18.9■□□□□ 0.62
SHMT2-202ENST00000414700 DPEP1P16444 411 aa18.9■□□□□ 0.62
SHMT2-202ENST00000414700 RILPL2Q969X0 211 aa18.9■□□□□ 0.62
SHMT2-202ENST00000414700 GPR101Q96P66 508 aaPredicted RBP18.9■□□□□ 0.62
SHMT2-202ENST00000414700 ANKRD2Q9GZV1 360 aa18.9■□□□□ 0.62
SHMT2-202ENST00000414700 IFIT1P09914 478 aaKnown RBP18.9■□□□□ 0.62
SHMT2-202ENST00000414700 BCAMP50895 628 aa18.9■□□□□ 0.62
SHMT2-202ENST00000414700 UBE4AQ14139 1066 aa18.9■□□□□ 0.62
SHMT2-202ENST00000414700 CCDC102BQ68D86 513 aa18.9■□□□□ 0.62
SHMT2-202ENST00000414700 PI16Q6UXB8 463 aa18.9■□□□□ 0.62
SHMT2-202ENST00000414700 WWC3Q9ULE0 1092 aa18.9■□□□□ 0.62
SHMT2-202ENST00000414700 ATP6V0A2Q9Y487 856 aa18.9■□□□□ 0.62
SHMT2-202ENST00000414700 XDHP47989 1333 aa18.89■□□□□ 0.61
SHMT2-202ENST00000414700 NFKBIBQ15653 356 aa18.89■□□□□ 0.61
SHMT2-202ENST00000414700 CCDC158Q5M9N0 1113 aa18.89■□□□□ 0.61
SHMT2-202ENST00000414700 TXNRD3Q86VQ6 643 aa18.89■□□□□ 0.61
SHMT2-202ENST00000414700 KLHL34Q8N239 644 aa18.89■□□□□ 0.61
SHMT2-202ENST00000414700 ZNF219Q9P2Y4 722 aaPredicted RBP18.89■□□□□ 0.61
SHMT2-202ENST00000414700 ZNF804BA4D1E1 1349 aa18.89■□□□□ 0.61
SHMT2-202ENST00000414700 GYG1P46976 350 aa18.88■□□□□ 0.61
SHMT2-202ENST00000414700 KCNJ4P48050 445 aa18.88■□□□□ 0.61
SHMT2-202ENST00000414700 TTC39AQ5SRH9 613 aa18.88■□□□□ 0.61
SHMT2-202ENST00000414700 SP8Q8IXZ3 490 aa18.88■□□□□ 0.61
SHMT2-202ENST00000414700 DNAJC2Q99543 621 aaKnown RBP18.88■□□□□ 0.61
SHMT2-202ENST00000414700 SNRKQ9NRH2 765 aa18.88■□□□□ 0.61
SHMT2-202ENST00000414700 IRS2Q9Y4H2 1338 aa18.87■□□□□ 0.61
SHMT2-202ENST00000414700 MCAMP43121 646 aa18.87■□□□□ 0.61
SHMT2-202ENST00000414700 POLLQ9UGP5 575 aa18.87■□□□□ 0.61
SHMT2-202ENST00000414700 DUOX1Q9NRD9 1551 aa18.86■□□□□ 0.61
SHMT2-202ENST00000414700 SEC24BO95487 1268 aa18.86■□□□□ 0.61
SHMT2-202ENST00000414700 CNKSR1Q969H4 720 aa18.86■□□□□ 0.61
SHMT2-202ENST00000414700 FAM84BQ96KN1 310 aaPredicted RBP18.86■□□□□ 0.61
SHMT2-202ENST00000414700 HAUS7Q99871 368 aa18.86■□□□□ 0.61
SHMT2-202ENST00000414700 IQSEC3Q9UPP2 1182 aaPredicted RBP18.86■□□□□ 0.61
SHMT2-202ENST00000414700 MYO5AQ9Y4I1 1855 aaKnown RBP18.86■□□□□ 0.61
SHMT2-202ENST00000414700 UFL1O94874 794 aa18.86■□□□□ 0.61
SHMT2-202ENST00000414700 TBC1D9Q6ZT07 1266 aa18.86■□□□□ 0.61
SHMT2-202ENST00000414700 TMC4Q7Z404 712 aa18.86■□□□□ 0.61
SHMT2-202ENST00000414700 BRCA1P38398 1863 aaKnown RBP18.86■□□□□ 0.61
SHMT2-202ENST00000414700 C7orf43Q8WVR3 580 aa18.85■□□□□ 0.61
SHMT2-202ENST00000414700 ANTXR1Q9H6X2 564 aa18.85■□□□□ 0.61
SHMT2-202ENST00000414700 SPON1Q9HCB6 807 aa18.85■□□□□ 0.61
SHMT2-202ENST00000414700 PODXL2Q9NZ53 605 aa18.85■□□□□ 0.61
SHMT2-202ENST00000414700 LEMD3Q9Y2U8 911 aa18.85■□□□□ 0.61
SHMT2-202ENST00000414700 ARID4AP29374 1257 aaPredicted RBP18.84■□□□□ 0.61
SHMT2-202ENST00000414700 FKBP4Q02790 459 aaKnown RBP eCLIP18.84■□□□□ 0.61
SHMT2-202ENST00000414700 RASGRF1Q13972 1273 aa18.84■□□□□ 0.61
SHMT2-202ENST00000414700 TBC1D16Q8TBP0 767 aa18.84■□□□□ 0.61
SHMT2-202ENST00000414700 GOLIM4O00461 696 aa18.84■□□□□ 0.61
SHMT2-202ENST00000414700 EIF5BO60841 1220 aaKnown RBP18.84■□□□□ 0.61
SHMT2-202ENST00000414700 ZAP70P43403 619 aa18.84■□□□□ 0.61
SHMT2-202ENST00000414700 CNTROBQ8N137 903 aa18.84■□□□□ 0.61
SHMT2-202ENST00000414700 GGA1Q9UJY5 639 aa18.84■□□□□ 0.61
SHMT2-202ENST00000414700 CDC45O75419 566 aa18.83■□□□□ 0.61
SHMT2-202ENST00000414700 TGFB2P61812 414 aa18.83■□□□□ 0.61
SHMT2-202ENST00000414700 TTLL6Q8N841 843 aa18.83■□□□□ 0.61
SHMT2-202ENST00000414700 C21orf2O43822 256 aa18.83■□□□□ 0.6
SHMT2-202ENST00000414700 CHGBP05060 677 aa18.83■□□□□ 0.6
SHMT2-202ENST00000414700 FAM43AQ8N2R8 423 aa18.83■□□□□ 0.6
SHMT2-202ENST00000414700 MPNDQ8N594 471 aa18.83■□□□□ 0.6
SHMT2-202ENST00000414700 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.83■□□□□ 0.6
SHMT2-202ENST00000414700 EVI5LQ96CN4 794 aa18.83■□□□□ 0.6
SHMT2-202ENST00000414700 ZNF512BQ96KM6 892 aaPredicted RBP18.83■□□□□ 0.6
SHMT2-202ENST00000414700 PAG1Q9NWQ8 432 aa18.83■□□□□ 0.6
SHMT2-202ENST00000414700 HMG20BQ9P0W2 317 aa18.83■□□□□ 0.6
SHMT2-202ENST00000414700 MYH13Q9UKX3 1938 aa18.82■□□□□ 0.6
SHMT2-202ENST00000414700 COL1A1P02452 1464 aaPredicted RBP18.82■□□□□ 0.6
SHMT2-202ENST00000414700 C6orf229H3BNL8 230 aa18.82■□□□□ 0.6
SHMT2-202ENST00000414700 ATP2B4P23634 1241 aa18.82■□□□□ 0.6
SHMT2-202ENST00000414700 CAVIN4Q5BKX8 364 aa18.82■□□□□ 0.6
SHMT2-202ENST00000414700 FBXO33Q7Z6M2 555 aa18.82■□□□□ 0.6
SHMT2-202ENST00000414700 NLGN2Q8NFZ4 835 aa18.82■□□□□ 0.6
SHMT2-202ENST00000414700 CD2APQ9Y5K6 639 aa18.82■□□□□ 0.6
SHMT2-202ENST00000414700 SNED1Q8TER0 1413 aa18.82■□□□□ 0.6
SHMT2-202ENST00000414700 DPP8Q6V1X1 898 aaPredicted RBP18.81■□□□□ 0.6
SHMT2-202ENST00000414700 VPS37DQ86XT2 251 aa18.81■□□□□ 0.6
SHMT2-202ENST00000414700 CYP2E1P05181 493 aaPredicted RBP18.81■□□□□ 0.6
SHMT2-202ENST00000414700 CHMLP26374 656 aa18.81■□□□□ 0.6
SHMT2-202ENST00000414700 HIBADHP31937 336 aaKnown RBP18.81■□□□□ 0.6
SHMT2-202ENST00000414700 IL25Q9H293 177 aa18.81■□□□□ 0.6
SHMT2-202ENST00000414700 UQCRFS1P1P0C7P4 283 aa18.8■□□□□ 0.6
SHMT2-202ENST00000414700 SPATA5Q8NB90 893 aa18.8■□□□□ 0.6
SHMT2-202ENST00000414700 FSD1Q9BTV5 496 aa18.8■□□□□ 0.6
SHMT2-202ENST00000414700 PIM2Q9P1W9 311 aa18.8■□□□□ 0.6
SHMT2-202ENST00000414700 CHD4Q14839 1912 aa18.8■□□□□ 0.6
SHMT2-202ENST00000414700 SLFNL1Q499Z3 407 aa18.79■□□□□ 0.6
SHMT2-202ENST00000414700 TMX4Q9H1E5 349 aaPredicted RBP18.79■□□□□ 0.6
SHMT2-202ENST00000414700 RIMBP2O15034 1052 aa18.79■□□□□ 0.6
SHMT2-202ENST00000414700 DAXXQ9UER7 740 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms