RNA–Protein interactions for RNA: ENST00000413971.5

TOP2B-202, Transcript of DNA topoisomerase II beta, humanhuman

TSL 5

Gene TOP2B, Length 2,049 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-202ENST00000413971 DSC3Q14574 896 aa5.69□□□□□ -1.5
TOP2B-202ENST00000413971 LCE2DQ5TA82 110 aaPredicted RBP5.69□□□□□ -1.5
TOP2B-202ENST00000413971 SLC17A8Q8NDX2 589 aa5.69□□□□□ -1.5
TOP2B-202ENST00000413971 MORC4Q8TE76 937 aa5.69□□□□□ -1.5
TOP2B-202ENST00000413971 TNRC6CQ9HCJ0 1690 aaKnown RBP5.69□□□□□ -1.5
TOP2B-202ENST00000413971 COL5A2P05997 1499 aaPredicted RBP5.69□□□□□ -1.5
TOP2B-202ENST00000413971 A0A0C4DFX4 3053 aa5.69□□□□□ -1.5
TOP2B-202ENST00000413971 VEGFAP15692 232 aaPredicted RBP5.69□□□□□ -1.5
TOP2B-202ENST00000413971 MPSTP25325 297 aa5.69□□□□□ -1.5
TOP2B-202ENST00000413971 MAP2K1Q02750 393 aaPredicted RBP5.69□□□□□ -1.5
TOP2B-202ENST00000413971 PLEKHG6Q3KR16 790 aa5.69□□□□□ -1.5
TOP2B-202ENST00000413971 HELQQ8TDG4 1101 aa5.69□□□□□ -1.5
TOP2B-202ENST00000413971 OCSTAMPQ9BR26 566 aa5.69□□□□□ -1.5
TOP2B-202ENST00000413971 BCS1LQ9Y276 419 aa5.69□□□□□ -1.5
TOP2B-202ENST00000413971 AKAP12Q02952 1782 aa5.69□□□□□ -1.5
TOP2B-202ENST00000413971 LMO7Q8WWI1 1683 aa5.68□□□□□ -1.5
TOP2B-202ENST00000413971 TUBGCP6Q96RT7 1819 aa5.68□□□□□ -1.5
TOP2B-202ENST00000413971 ABCC11Q96J66 1382 aa5.68□□□□□ -1.5
TOP2B-202ENST00000413971 NHSQ6T4R5 1651 aa5.68□□□□□ -1.5
TOP2B-202ENST00000413971 EXOC5O00471 708 aa5.68□□□□□ -1.5
TOP2B-202ENST00000413971 STK10O94804 968 aaKnown RBP5.68□□□□□ -1.5
TOP2B-202ENST00000413971 MAP7D1Q3KQU3 841 aa5.68□□□□□ -1.5
TOP2B-202ENST00000413971 HSP90AB2PQ58FF8 381 aa5.68□□□□□ -1.5
TOP2B-202ENST00000413971 OXLD1Q5BKU9 147 aa5.68□□□□□ -1.5
TOP2B-202ENST00000413971 LYPD8Q6UX82 237 aa5.68□□□□□ -1.5
TOP2B-202ENST00000413971 RETREG3Q86VR2 466 aa5.68□□□□□ -1.5
TOP2B-202ENST00000413971 ZCRB1Q8TBF4 217 aaKnown RBP5.68□□□□□ -1.5
TOP2B-202ENST00000413971 STAG1Q8WVM7 1258 aa5.68□□□□□ -1.5
TOP2B-202ENST00000413971 PMM1Q92871 262 aa5.68□□□□□ -1.5
TOP2B-202ENST00000413971 IRF2BPLQ9H1B7 796 aa5.68□□□□□ -1.5
TOP2B-202ENST00000413971 USP6P35125 1406 aa5.68□□□□□ -1.5
TOP2B-202ENST00000413971 ANKRD50Q9ULJ7 1429 aa5.68□□□□□ -1.5
TOP2B-202ENST00000413971 CPDO75976 1380 aa5.67□□□□□ -1.5
TOP2B-202ENST00000413971 POTEMA6NI47 508 aa5.67□□□□□ -1.5
TOP2B-202ENST00000413971 SNPHO15079 494 aa5.67□□□□□ -1.5
TOP2B-202ENST00000413971 GPR182O15218 404 aa5.67□□□□□ -1.5
TOP2B-202ENST00000413971 NDUFB5O43674 189 aa5.67□□□□□ -1.5
TOP2B-202ENST00000413971 FGRP09769 529 aa5.67□□□□□ -1.5
TOP2B-202ENST00000413971 FXR1P51114 621 aaKnown RBP eCLIP5.67□□□□□ -1.5
TOP2B-202ENST00000413971 KCNQ4P56696 695 aa5.67□□□□□ -1.5
TOP2B-202ENST00000413971 TSEN2Q8NCE0 465 aaKnown RBP5.67□□□□□ -1.5
TOP2B-202ENST00000413971 KHSRPQ92945 711 aaKnown RBP eCLIP5.67□□□□□ -1.57e-8■■□□□ 13.1
TOP2B-202ENST00000413971 BRINP2Q9C0B6 783 aa5.67□□□□□ -1.5
TOP2B-202ENST00000413971 CCDC87Q9NVE4 849 aa5.67□□□□□ -1.5
TOP2B-202ENST00000413971 CUL9Q8IWT3 2517 aa5.67□□□□□ -1.5
TOP2B-202ENST00000413971 TRIM6-TRIM34B2RNG4 842 aa5.67□□□□□ -1.5
TOP2B-202ENST00000413971 IGHA2P01877 340 aa5.67□□□□□ -1.5
TOP2B-202ENST00000413971 NUDT7P0C024 238 aa5.67□□□□□ -1.5
TOP2B-202ENST00000413971 WEE1P30291 646 aa5.67□□□□□ -1.5
TOP2B-202ENST00000413971 SWT1Q5T5J6 900 aaKnown RBP5.67□□□□□ -1.5
TOP2B-202ENST00000413971 NUTM2GQ5VZR2 741 aa5.67□□□□□ -1.5
TOP2B-202ENST00000413971 POTEGQ6S5H5 508 aa5.67□□□□□ -1.5
TOP2B-202ENST00000413971 TOM1L2Q6ZVM7 507 aa5.67□□□□□ -1.5
TOP2B-202ENST00000413971 CCDC85AQ96PX6 553 aaPredicted RBP5.67□□□□□ -1.5
TOP2B-202ENST00000413971 PRKD2Q9BZL6 878 aa5.67□□□□□ -1.5
TOP2B-202ENST00000413971 DDX41Q9UJV9 622 aaKnown RBP5.67□□□□□ -1.5
TOP2B-202ENST00000413971 RBM19Q9Y4C8 960 aaKnown RBP5.67□□□□□ -1.5
TOP2B-202ENST00000413971 IFT172Q9UG01 1749 aa5.66□□□□□ -1.5
TOP2B-202ENST00000413971 ANKARQ7Z5J8 1434 aa5.66□□□□□ -1.5
TOP2B-202ENST00000413971 K7ELQ4 463 aaPredicted RBP5.66□□□□□ -1.5
TOP2B-202ENST00000413971 U2SURPO15042 1029 aaKnown RBP5.66□□□□□ -1.5
TOP2B-202ENST00000413971 ST18O60284 1047 aa5.66□□□□□ -1.5
TOP2B-202ENST00000413971 SOX10P56693 466 aa5.66□□□□□ -1.5
TOP2B-202ENST00000413971 PLCB3Q01970 1234 aa5.66□□□□□ -1.5
TOP2B-202ENST00000413971 SOGA3Q5TF21 947 aa5.66□□□□□ -1.5
TOP2B-202ENST00000413971 DESI1Q6ICB0 168 aa5.66□□□□□ -1.5
TOP2B-202ENST00000413971 APBB1IPQ7Z5R6 666 aaPredicted RBP5.66□□□□□ -1.5
TOP2B-202ENST00000413971 MPNDQ8N594 471 aa5.66□□□□□ -1.5
TOP2B-202ENST00000413971 CYLDQ9NQC7 956 aa5.66□□□□□ -1.5
TOP2B-202ENST00000413971 RNF181Q9P0P0 153 aa5.66□□□□□ -1.5
TOP2B-202ENST00000413971 DOLKQ9UPQ8 538 aa5.66□□□□□ -1.5
TOP2B-202ENST00000413971 VIRMAQ69YN4 1812 aaKnown RBP5.66□□□□□ -1.5
TOP2B-202ENST00000413971 PTCD1O75127 700 aaKnown RBP5.65□□□□□ -1.5
TOP2B-202ENST00000413971 FAM13AO94988 1023 aa5.65□□□□□ -1.5
TOP2B-202ENST00000413971 F12P00748 615 aaPredicted RBP5.65□□□□□ -1.5
TOP2B-202ENST00000413971 PROX2Q3B8N5 592 aa5.65□□□□□ -1.5
TOP2B-202ENST00000413971 GRIPAP1Q4V328 841 aa5.65□□□□□ -1.5
TOP2B-202ENST00000413971 PACS2Q86VP3 889 aa5.65□□□□□ -1.5
TOP2B-202ENST00000413971 EVI5LQ96CN4 794 aa5.65□□□□□ -1.5
TOP2B-202ENST00000413971 MRFAP1L1Q96HT8 127 aa5.65□□□□□ -1.5
TOP2B-202ENST00000413971 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.65□□□□□ -1.53e-7■■□□□ 13.4
TOP2B-202ENST00000413971 PRR12Q9ULL5 1215 aa5.65□□□□□ -1.5
TOP2B-202ENST00000413971 PRR36Q9H6K5 1346 aa5.65□□□□□ -1.5
TOP2B-202ENST00000413971 PKD1L3Q7Z443 1732 aa5.65□□□□□ -1.51
TOP2B-202ENST00000413971 BTAF1O14981 1849 aa5.65□□□□□ -1.51
TOP2B-202ENST00000413971 CTSHP09668 335 aa5.65□□□□□ -1.51
TOP2B-202ENST00000413971 XRCC5P13010 732 aaKnown RBP5.65□□□□□ -1.51
TOP2B-202ENST00000413971 NPR3P17342 541 aa5.65□□□□□ -1.51
TOP2B-202ENST00000413971 USP48Q86UV5 1035 aa5.65□□□□□ -1.51
TOP2B-202ENST00000413971 NGDNQ8NEJ9 315 aaKnown RBP5.65□□□□□ -1.51
TOP2B-202ENST00000413971 DDX56Q9NY93 547 aaKnown RBP5.65□□□□□ -1.51
TOP2B-202ENST00000413971 MAGEC2Q9UBF1 373 aaPredicted RBP5.65□□□□□ -1.51
TOP2B-202ENST00000413971 TRPM1Q7Z4N2 1603 aa5.65□□□□□ -1.51
TOP2B-202ENST00000413971 GLTPD2A6NH11 291 aa5.64□□□□□ -1.51
TOP2B-202ENST00000413971 DGKZQ13574 1117 aa5.64□□□□□ -1.51
TOP2B-202ENST00000413971 NFE2L2Q16236 605 aa5.64□□□□□ -1.51
TOP2B-202ENST00000413971 TMEM132EQ6IEE7 984 aa5.64□□□□□ -1.51
TOP2B-202ENST00000413971 CCDC146Q8IYE0 955 aa5.64□□□□□ -1.51
TOP2B-202ENST00000413971 NBPF15Q8N660 670 aa5.64□□□□□ -1.51
TOP2B-202ENST00000413971 S100BP04271 92 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms