RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 NBPF7P0C2Y1 421 aaPredicted RBP10.83□□□□□ -0.68
HERPUD2-203ENST00000413517 EPHX2P34913 555 aa10.83□□□□□ -0.68
HERPUD2-203ENST00000413517 DOK7Q18PE1 504 aa10.83□□□□□ -0.68
HERPUD2-203ENST00000413517 WASHC4Q2M389 1173 aa10.83□□□□□ -0.68
HERPUD2-203ENST00000413517 ALDH1L2Q3SY69 923 aa10.83□□□□□ -0.68
HERPUD2-203ENST00000413517 IL27Q8NEV9 243 aa10.83□□□□□ -0.68
HERPUD2-203ENST00000413517 SUCLG2Q96I99 432 aa10.83□□□□□ -0.68
HERPUD2-203ENST00000413517 CDC5LQ99459 802 aaKnown RBP10.83□□□□□ -0.68
HERPUD2-203ENST00000413517 SRCIN1Q9C0H9 1055 aa10.83□□□□□ -0.68
HERPUD2-203ENST00000413517 SMC4Q9NTJ3 1288 aa10.83□□□□□ -0.68
HERPUD2-203ENST00000413517 MINPP1Q9UNW1 487 aa10.83□□□□□ -0.68
HERPUD2-203ENST00000413517 UTYO14607 1347 aa10.83□□□□□ -0.68
HERPUD2-203ENST00000413517 PTPRCP08575 1304 aa10.83□□□□□ -0.68
HERPUD2-203ENST00000413517 XDHP47989 1333 aa10.83□□□□□ -0.68
HERPUD2-203ENST00000413517 ECE2O60344 883 aa10.82□□□□□ -0.68
HERPUD2-203ENST00000413517 GMPSP49915 693 aaPredicted RBP10.82□□□□□ -0.68
HERPUD2-203ENST00000413517 HNRNPUQ00839 825 aaKnown RBP eCLIP10.82□□□□□ -0.68
HERPUD2-203ENST00000413517 EAPPQ56P03 285 aaPredicted RBP10.82□□□□□ -0.68
HERPUD2-203ENST00000413517 CIAPIN1Q6FI81 312 aa10.82□□□□□ -0.68
HERPUD2-203ENST00000413517 CHADLQ6NUI6 762 aa10.82□□□□□ -0.68
HERPUD2-203ENST00000413517 LMBR1LQ6UX01 489 aa10.82□□□□□ -0.68
HERPUD2-203ENST00000413517 DNAJC5GQ8N7S2 189 aa10.82□□□□□ -0.68
HERPUD2-203ENST00000413517 BSDC1Q9NW68 430 aaPredicted RBP10.82□□□□□ -0.68
HERPUD2-203ENST00000413517 ANKIB1Q9P2G1 1089 aa10.82□□□□□ -0.68
HERPUD2-203ENST00000413517 GGA1Q9UJY5 639 aa10.82□□□□□ -0.68
HERPUD2-203ENST00000413517 SNAP23O00161 211 aa10.81□□□□□ -0.68
HERPUD2-203ENST00000413517 PSMD14O00487 310 aa10.81□□□□□ -0.68
HERPUD2-203ENST00000413517 KLRK1P26718 216 aa10.81□□□□□ -0.68
HERPUD2-203ENST00000413517 APLP1P51693 650 aa10.81□□□□□ -0.68
HERPUD2-203ENST00000413517 RARSP54136 660 aaKnown RBP10.81□□□□□ -0.68
HERPUD2-203ENST00000413517 TXNRD3Q86VQ6 643 aa10.81□□□□□ -0.68
HERPUD2-203ENST00000413517 LDHDQ86WU2 507 aa10.81□□□□□ -0.68
HERPUD2-203ENST00000413517 ANKRD44Q8N8A2 993 aa10.81□□□□□ -0.68
HERPUD2-203ENST00000413517 ZNF594Q96JF6 807 aaPredicted RBP10.81□□□□□ -0.68
HERPUD2-203ENST00000413517 KDM4CQ9H3R0 1056 aa10.81□□□□□ -0.68
HERPUD2-203ENST00000413517 GPRC5DQ9NZD1 345 aa10.81□□□□□ -0.68
HERPUD2-203ENST00000413517 TNNQ9UQP3 1299 aa10.81□□□□□ -0.68
HERPUD2-203ENST00000413517 PASKQ96RG2 1323 aa10.81□□□□□ -0.68
HERPUD2-203ENST00000413517 IRS2Q9Y4H2 1338 aa10.81□□□□□ -0.68
HERPUD2-203ENST00000413517 ITGBL1O95965 494 aaPredicted RBP10.8□□□□□ -0.68
HERPUD2-203ENST00000413517 CT47B1P0C2W7 299 aaPredicted RBP10.8□□□□□ -0.68
HERPUD2-203ENST00000413517 CCT4P50991 539 aaKnown RBP10.8□□□□□ -0.68
HERPUD2-203ENST00000413517 FMR1Q06787 632 aaKnown RBP eCLIP10.8□□□□□ -0.68
HERPUD2-203ENST00000413517 MAP1SQ66K74 1059 aaPredicted RBP10.8□□□□□ -0.68
HERPUD2-203ENST00000413517 TRPM4Q8TD43 1214 aa10.8□□□□□ -0.68
HERPUD2-203ENST00000413517 USP44Q9H0E7 712 aa10.8□□□□□ -0.68
HERPUD2-203ENST00000413517 C9orf78Q9NZ63 289 aaPredicted RBP10.8□□□□□ -0.68
HERPUD2-203ENST00000413517 NOB1Q9ULX3 412 aaKnown RBP10.8□□□□□ -0.68
HERPUD2-203ENST00000413517 ARIH1Q9Y4X5 557 aaPredicted RBP10.8□□□□□ -0.68
HERPUD2-203ENST00000413517 MED23Q9ULK4 1368 aa10.79□□□□□ -0.68
HERPUD2-203ENST00000413517 EGFRP00533 1210 aa10.79□□□□□ -0.68
HERPUD2-203ENST00000413517 ATP2B4P23634 1241 aa10.79□□□□□ -0.68
HERPUD2-203ENST00000413517 IGHMBP2P38935 993 aaKnown RBP10.79□□□□□ -0.68
HERPUD2-203ENST00000413517 PSEN1P49768 467 aa10.79□□□□□ -0.68
HERPUD2-203ENST00000413517 HIRAP54198 1017 aaPredicted RBP10.79□□□□□ -0.68
HERPUD2-203ENST00000413517 CHRNDQ07001 517 aa10.79□□□□□ -0.68
HERPUD2-203ENST00000413517 RABL6Q3YEC7 729 aaPredicted RBP10.79□□□□□ -0.68
HERPUD2-203ENST00000413517 HELBQ8NG08 1087 aaPredicted RBP10.79□□□□□ -0.68
HERPUD2-203ENST00000413517 EYA3Q99504 573 aa10.79□□□□□ -0.68
HERPUD2-203ENST00000413517 ARID3AQ99856 593 aa10.79□□□□□ -0.68
HERPUD2-203ENST00000413517 BICC1Q9H694 974 aaKnown RBP10.79□□□□□ -0.68
HERPUD2-203ENST00000413517 CHMP3Q9Y3E7 222 aa10.79□□□□□ -0.68
HERPUD2-203ENST00000413517 MYH13Q9UKX3 1938 aa10.78□□□□□ -0.68
HERPUD2-203ENST00000413517 ANKRD18BA2A2Z9 1011 aa10.78□□□□□ -0.68
HERPUD2-203ENST00000413517 TAF5LO75529 589 aa10.78□□□□□ -0.68
HERPUD2-203ENST00000413517 BCAR3O75815 825 aa10.78□□□□□ -0.68
HERPUD2-203ENST00000413517 LMOD1P29536 600 aaPredicted RBP10.78□□□□□ -0.68
HERPUD2-203ENST00000413517 PNMA8AQ86V59 439 aaPredicted RBP10.78□□□□□ -0.68
HERPUD2-203ENST00000413517 GPIHBP1Q8IV16 184 aa10.78□□□□□ -0.68
HERPUD2-203ENST00000413517 KRI1Q8N9T8 703 aaKnown RBP10.78□□□□□ -0.68
HERPUD2-203ENST00000413517 PUS3Q9BZE2 481 aaKnown RBP10.78□□□□□ -0.68
HERPUD2-203ENST00000413517 ZC3H12CQ9C0D7 883 aaKnown RBP10.78□□□□□ -0.68
HERPUD2-203ENST00000413517 PCDHB8Q9UN66 801 aa10.78□□□□□ -0.68
HERPUD2-203ENST00000413517 PCDHB13Q9Y5F0 798 aa10.78□□□□□ -0.68
HERPUD2-203ENST00000413517 ARAP2Q8WZ64 1704 aa10.78□□□□□ -0.68
HERPUD2-203ENST00000413517 ZNF609O15014 1411 aa10.77□□□□□ -0.68
HERPUD2-203ENST00000413517 VIL1P09327 827 aaKnown RBP10.77□□□□□ -0.69
HERPUD2-203ENST00000413517 IFIT5Q13325 482 aaKnown RBP10.77□□□□□ -0.69
HERPUD2-203ENST00000413517 TNIP1Q15025 636 aa10.77□□□□□ -0.69
HERPUD2-203ENST00000413517 MICALL2Q8IY33 904 aa10.77□□□□□ -0.69
HERPUD2-203ENST00000413517 FBXO22Q8NEZ5 403 aa10.77□□□□□ -0.69
HERPUD2-203ENST00000413517 MPHOSPH8Q99549 860 aa10.77□□□□□ -0.69
HERPUD2-203ENST00000413517 ADARB2Q9NS39 739 aaKnown RBP10.77□□□□□ -0.69
HERPUD2-203ENST00000413517 CNOT7Q9UIV1 285 aaKnown RBP10.77□□□□□ -0.69
HERPUD2-203ENST00000413517 ZNF804BA4D1E1 1349 aa10.77□□□□□ -0.69
HERPUD2-203ENST00000413517 ZBED9Q6R2W3 1325 aa10.77□□□□□ -0.69
HERPUD2-203ENST00000413517 PCNTO95613 3336 aa10.77□□□□□ -0.69
HERPUD2-203ENST00000413517 ECM29Q5VYK3 1845 aa10.77□□□□□ -0.69
HERPUD2-203ENST00000413517 USP50Q70EL3 339 aaPredicted RBP10.76□□□□□ -0.69
HERPUD2-203ENST00000413517 SAMD7Q7Z3H4 446 aa10.76□□□□□ -0.69
HERPUD2-203ENST00000413517 CNTROBQ8N137 903 aa10.76□□□□□ -0.69
HERPUD2-203ENST00000413517 GMLQ99445 158 aa10.76□□□□□ -0.69
HERPUD2-203ENST00000413517 MXD3Q9BW11 206 aa10.76□□□□□ -0.69
HERPUD2-203ENST00000413517 LEMD3Q9Y2U8 911 aa10.76□□□□□ -0.69
HERPUD2-203ENST00000413517 TRAF5O00463 557 aa10.75□□□□□ -0.69
HERPUD2-203ENST00000413517 TRIM27P14373 513 aa10.75□□□□□ -0.69
HERPUD2-203ENST00000413517 RFX5P48382 616 aaPredicted RBP10.75□□□□□ -0.69
HERPUD2-203ENST00000413517 MFSD10Q14728 455 aa10.75□□□□□ -0.69
HERPUD2-203ENST00000413517 CCDC57Q2TAC2 916 aa10.75□□□□□ -0.69
HERPUD2-203ENST00000413517 LRRC24Q50LG9 513 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms