RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 MED23Q9ULK4 1368 aa24.56■■□□□ 1.52
CPSF7-204ENST00000413232 USP17L3A6NCW0 530 aa24.56■■□□□ 1.52
CPSF7-204ENST00000413232 USP17L4A6NCW7 530 aa24.56■■□□□ 1.52
CPSF7-204ENST00000413232 F6X3S4 739 aa24.56■■□□□ 1.52
CPSF7-204ENST00000413232 CSF1RP07333 972 aa24.56■■□□□ 1.52
CPSF7-204ENST00000413232 ITGA6P23229 1130 aa24.56■■□□□ 1.52
CPSF7-204ENST00000413232 USP17L1Q7RTZ2 530 aa24.56■■□□□ 1.52
CPSF7-204ENST00000413232 KLRK1P26718 216 aa24.55■■□□□ 1.52
CPSF7-204ENST00000413232 SCARF1Q14162 830 aa24.55■■□□□ 1.52
CPSF7-204ENST00000413232 BEGAINQ9BUH8 593 aa24.55■■□□□ 1.52
CPSF7-204ENST00000413232 GBA2Q9HCG7 927 aaPredicted RBP24.55■■□□□ 1.52
CPSF7-204ENST00000413232 SCAF8Q9UPN6 1271 aaKnown RBP24.54■■□□□ 1.52
CPSF7-204ENST00000413232 A0A1B0GUL6 1792 aa24.54■■□□□ 1.52
CPSF7-204ENST00000413232 USP17L8P0C7I0 530 aa24.53■■□□□ 1.52
CPSF7-204ENST00000413232 IGHMBP2P38935 993 aaKnown RBP24.53■■□□□ 1.52
CPSF7-204ENST00000413232 DACT2Q5SW24 774 aa24.53■■□□□ 1.52
CPSF7-204ENST00000413232 ANGEL2Q5VTE6 544 aaKnown RBP24.53■■□□□ 1.52
CPSF7-204ENST00000413232 FAM9BQ8IZU0 186 aa24.53■■□□□ 1.52
CPSF7-204ENST00000413232 MYH16Q9H6N6 1097 aa24.53■■□□□ 1.52
CPSF7-204ENST00000413232 MYOZ2Q9NPC6 264 aa24.53■■□□□ 1.52
CPSF7-204ENST00000413232 FAM155AB1AL88 458 aaPredicted RBP24.52■■□□□ 1.52
CPSF7-204ENST00000413232 FOXO4P98177 505 aa24.52■■□□□ 1.52
CPSF7-204ENST00000413232 BEND3Q5T5X7 828 aa24.52■■□□□ 1.52
CPSF7-204ENST00000413232 SULF1Q8IWU6 871 aa24.52■■□□□ 1.52
CPSF7-204ENST00000413232 SNAP23O00161 211 aa24.51■■□□□ 1.51
CPSF7-204ENST00000413232 BRPF1P55201 1214 aaPredicted RBP24.51■■□□□ 1.51
CPSF7-204ENST00000413232 RGMBQ6NW40 437 aa24.51■■□□□ 1.51
CPSF7-204ENST00000413232 C2orf69Q8N8R5 385 aa24.51■■□□□ 1.51
CPSF7-204ENST00000413232 CDCA5Q96FF9 252 aa24.51■■□□□ 1.51
CPSF7-204ENST00000413232 LEMD3Q9Y2U8 911 aa24.51■■□□□ 1.51
CPSF7-204ENST00000413232 ZNF804BA4D1E1 1349 aa24.5■■□□□ 1.51
CPSF7-204ENST00000413232 CHRNDQ07001 517 aa24.49■■□□□ 1.51
CPSF7-204ENST00000413232 NOGQ13253 232 aa24.49■■□□□ 1.51
CPSF7-204ENST00000413232 NBPF9Q3BBW0 867 aa24.49■■□□□ 1.51
CPSF7-204ENST00000413232 EPHA10Q5JZY3 1008 aa24.49■■□□□ 1.51
CPSF7-204ENST00000413232 MPHOSPH8Q99549 860 aa24.49■■□□□ 1.51
CPSF7-204ENST00000413232 COA1Q9GZY4 146 aa24.49■■□□□ 1.51
CPSF7-204ENST00000413232 FBXW7Q969H0 707 aa24.48■■□□□ 1.51
CPSF7-204ENST00000413232 ABHD8Q96I13 439 aa24.48■■□□□ 1.51
CPSF7-204ENST00000413232 AKAP11Q9UKA4 1901 aa24.48■■□□□ 1.51
CPSF7-204ENST00000413232 IRS2Q9Y4H2 1338 aa24.47■■□□□ 1.51
CPSF7-204ENST00000413232 STRIP1Q5VSL9 837 aa24.47■■□□□ 1.51
CPSF7-204ENST00000413232 HELBQ8NG08 1087 aaPredicted RBP24.47■■□□□ 1.51
CPSF7-204ENST00000413232 ANKRD2Q9GZV1 360 aa24.47■■□□□ 1.51
CPSF7-204ENST00000413232 ANKRD18BA2A2Z9 1011 aa24.46■■□□□ 1.51
CPSF7-204ENST00000413232 TAF5LO75529 589 aa24.46■■□□□ 1.51
CPSF7-204ENST00000413232 ZNF157P51786 506 aaPredicted RBP24.46■■□□□ 1.51
CPSF7-204ENST00000413232 PRAMEF18Q5VWM3 479 aa24.46■■□□□ 1.51
CPSF7-204ENST00000413232 PITPNM2Q9BZ72 1349 aa24.45■■□□□ 1.5
CPSF7-204ENST00000413232 TTLL5Q6EMB2 1281 aa24.45■■□□□ 1.5
CPSF7-204ENST00000413232 MOB2Q70IA6 237 aa24.45■■□□□ 1.5
CPSF7-204ENST00000413232 ZNF521Q96K83 1311 aa24.44■■□□□ 1.5
CPSF7-204ENST00000413232 WNT10BO00744 389 aa24.44■■□□□ 1.5
CPSF7-204ENST00000413232 CA12O43570 354 aa24.44■■□□□ 1.5
CPSF7-204ENST00000413232 KIF23Q02241 960 aaPredicted RBP24.44■■□□□ 1.5
CPSF7-204ENST00000413232 LMBR1LQ6UX01 489 aa24.44■■□□□ 1.5
CPSF7-204ENST00000413232 GTF2IP78347 998 aa24.43■■□□□ 1.5
CPSF7-204ENST00000413232 IFIT5Q13325 482 aaKnown RBP24.43■■□□□ 1.5
CPSF7-204ENST00000413232 CCDC102AQ96A19 550 aa24.43■■□□□ 1.5
CPSF7-204ENST00000413232 ZNF594Q96JF6 807 aaPredicted RBP24.43■■□□□ 1.5
CPSF7-204ENST00000413232 CD209Q9NNX6 404 aa24.43■■□□□ 1.5
CPSF7-204ENST00000413232 CHMP3Q9Y3E7 222 aa24.43■■□□□ 1.5
CPSF7-204ENST00000413232 PAPPA2Q9BXP8 1791 aa24.43■■□□□ 1.5
CPSF7-204ENST00000413232 GRM8O00222 908 aa24.42■■□□□ 1.5
CPSF7-204ENST00000413232 SLC10A3P09131 477 aa24.42■■□□□ 1.5
CPSF7-204ENST00000413232 MYO3BQ8WXR4 1341 aa24.41■■□□□ 1.5
CPSF7-204ENST00000413232 SASH1O94885 1247 aa24.41■■□□□ 1.5
CPSF7-204ENST00000413232 KCNJ4P48050 445 aa24.41■■□□□ 1.5
CPSF7-204ENST00000413232 KIAA0825Q8IV33 1275 aa24.41■■□□□ 1.5
CPSF7-204ENST00000413232 OGFOD1Q8N543 542 aa24.41■■□□□ 1.5
CPSF7-204ENST00000413232 SLC4A10Q6U841 1118 aa24.4■■□□□ 1.5
CPSF7-204ENST00000413232 CERS5Q8N5B7 392 aa24.4■■□□□ 1.5
CPSF7-204ENST00000413232 KAZALD1Q96I82 304 aa24.4■■□□□ 1.5
CPSF7-204ENST00000413232 CSRNP1Q96S65 589 aa24.4■■□□□ 1.5
CPSF7-204ENST00000413232 C15orf52Q6ZUT6 534 aaKnown RBP24.39■■□□□ 1.49
CPSF7-204ENST00000413232 RASAL3Q86YV0 1011 aa24.39■■□□□ 1.49
CPSF7-204ENST00000413232 ZBED3Q96IU2 234 aaPredicted RBP24.39■■□□□ 1.49
CPSF7-204ENST00000413232 RNF186Q9NXI6 227 aa24.38■■□□□ 1.49
CPSF7-204ENST00000413232 UBE2Q2LH0YL09 131 aa24.37■■□□□ 1.49
CPSF7-204ENST00000413232 ALDH1L1O75891 902 aa24.37■■□□□ 1.49
CPSF7-204ENST00000413232 SUCLG2Q96I99 432 aa24.37■■□□□ 1.49
CPSF7-204ENST00000413232 C9orf78Q9NZ63 289 aaPredicted RBP24.37■■□□□ 1.49
CPSF7-204ENST00000413232 PCDHAC2Q9Y5I4 1007 aa24.37■■□□□ 1.49
CPSF7-204ENST00000413232 ECM29Q5VYK3 1845 aa24.37■■□□□ 1.49
CPSF7-204ENST00000413232 PLIN1O60240 522 aa24.36■■□□□ 1.49
CPSF7-204ENST00000413232 TRPA1O75762 1119 aa24.36■■□□□ 1.49
CPSF7-204ENST00000413232 FKBP1BP68106 108 aa24.36■■□□□ 1.49
CPSF7-204ENST00000413232 CCDC57Q2TAC2 916 aa24.36■■□□□ 1.49
CPSF7-204ENST00000413232 LDHAL6AQ6ZMR3 332 aa24.36■■□□□ 1.49
CPSF7-204ENST00000413232 SRCIN1Q9C0H9 1055 aa24.36■■□□□ 1.49
CPSF7-204ENST00000413232 MCOLN1Q9GZU1 580 aa24.36■■□□□ 1.49
CPSF7-204ENST00000413232 NBPF7P0C2Y1 421 aaPredicted RBP24.35■■□□□ 1.49
CPSF7-204ENST00000413232 JAG2Q9Y219 1238 aa24.35■■□□□ 1.49
CPSF7-204ENST00000413232 IL1R1P14778 569 aa24.34■■□□□ 1.49
CPSF7-204ENST00000413232 MRPL50Q8N5N7 158 aaKnown RBP24.34■■□□□ 1.49
CPSF7-204ENST00000413232 PUS3Q9BZE2 481 aaKnown RBP24.34■■□□□ 1.49
CPSF7-204ENST00000413232 CCDC85CA6NKD9 419 aa24.33■■□□□ 1.49
CPSF7-204ENST00000413232 CNNM1Q9NRU3 951 aa24.33■■□□□ 1.49
CPSF7-204ENST00000413232 SAGE1Q9NXZ1 904 aa24.33■■□□□ 1.49
CPSF7-204ENST00000413232 HDAC9Q9UKV0 1011 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms