RNA–Protein interactions for RNA: ENST00000412446.5

LINC00476-202, long intergenic non-protein coding RNA 476, humanhuman

TSL 1 (best)

Gene LINC00476, Length 809 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-202ENST00000412446 PRAMEF22A3QJZ6 481 aa10.74□□□□□ -0.69
LINC00476-202ENST00000412446 HAX1O00165 279 aa10.74□□□□□ -0.69
LINC00476-202ENST00000412446 PPP1R42Q7Z4L9 355 aa10.74□□□□□ -0.69
LINC00476-202ENST00000412446 ZNF296Q8WUU4 475 aaPredicted RBP10.74□□□□□ -0.69
LINC00476-202ENST00000412446 PTCD2Q8WV60 388 aaKnown RBP10.74□□□□□ -0.69
LINC00476-202ENST00000412446 C7orf43Q8WVR3 580 aa10.74□□□□□ -0.69
LINC00476-202ENST00000412446 PSMD1Q99460 953 aa10.74□□□□□ -0.69
LINC00476-202ENST00000412446 CHMP4AQ9BY43 222 aa10.74□□□□□ -0.69
LINC00476-202ENST00000412446 TSPYL4Q9UJ04 414 aa10.74□□□□□ -0.69
LINC00476-202ENST00000412446 HOXA10P31260 410 aaPredicted RBP10.73□□□□□ -0.69
LINC00476-202ENST00000412446 RIPK4P57078 832 aa10.73□□□□□ -0.69
LINC00476-202ENST00000412446 PCMTD1Q96MG8 357 aaPredicted RBP10.73□□□□□ -0.69
LINC00476-202ENST00000412446 CSRNP1Q96S65 589 aa10.73□□□□□ -0.69
LINC00476-202ENST00000412446 ARID3AQ99856 593 aa10.73□□□□□ -0.69
LINC00476-202ENST00000412446 TMUB1Q9BVT8 246 aa10.73□□□□□ -0.69
LINC00476-202ENST00000412446 VPS33BQ9H267 617 aa10.73□□□□□ -0.69
LINC00476-202ENST00000412446 NPDC1Q9NQX5 325 aaPredicted RBP10.73□□□□□ -0.69
LINC00476-202ENST00000412446 ANKRD36CQ5JPF3 1778 aa10.72□□□□□ -0.69
LINC00476-202ENST00000412446 FZD9O00144 591 aa10.72□□□□□ -0.69
LINC00476-202ENST00000412446 TMPOP42166 694 aaKnown RBP10.72□□□□□ -0.69
LINC00476-202ENST00000412446 EPS15P42566 896 aa10.72□□□□□ -0.69
LINC00476-202ENST00000412446 WDR43Q15061 677 aaKnown RBP eCLIP10.72□□□□□ -0.69
LINC00476-202ENST00000412446 TMX4Q9H1E5 349 aaPredicted RBP10.72□□□□□ -0.69
LINC00476-202ENST00000412446 PIP4K2AP48426 406 aaPredicted RBP10.71□□□□□ -0.69
LINC00476-202ENST00000412446 SCNN1DP51172 638 aa10.71□□□□□ -0.69
LINC00476-202ENST00000412446 CALD1Q05682 793 aaKnown RBP10.71□□□□□ -0.69
LINC00476-202ENST00000412446 HLFQ16534 295 aa10.71□□□□□ -0.69
LINC00476-202ENST00000412446 ZNF34Q8IZ26 560 aa10.71□□□□□ -0.69
LINC00476-202ENST00000412446 GPC2Q8N158 579 aa10.71□□□□□ -0.69
LINC00476-202ENST00000412446 SNED1Q8TER0 1413 aa10.71□□□□□ -0.69
LINC00476-202ENST00000412446 RPGRQ92834 1020 aaKnown RBP10.71□□□□□ -0.69
LINC00476-202ENST00000412446 RUNDC1Q96C34 613 aa10.71□□□□□ -0.69
LINC00476-202ENST00000412446 CRAMP1Q96RY5 1269 aa10.71□□□□□ -0.69
LINC00476-202ENST00000412446 GLIS2Q9BZE0 524 aaPredicted RBP10.71□□□□□ -0.69
LINC00476-202ENST00000412446 HDAC9Q9UKV0 1011 aa10.71□□□□□ -0.69
LINC00476-202ENST00000412446 ABCC12Q96J65 1359 aa10.7□□□□□ -0.7
LINC00476-202ENST00000412446 HUNKP57058 714 aa10.7□□□□□ -0.7
LINC00476-202ENST00000412446 TMC4Q7Z404 712 aa10.7□□□□□ -0.7
LINC00476-202ENST00000412446 JDP2Q8WYK2 163 aa10.7□□□□□ -0.7
LINC00476-202ENST00000412446 RBM17Q96I25 401 aaKnown RBP10.7□□□□□ -0.7
LINC00476-202ENST00000412446 MIS18AQ9NYP9 233 aa10.7□□□□□ -0.7
LINC00476-202ENST00000412446 COL4A5P29400 1685 aa10.69□□□□□ -0.7
LINC00476-202ENST00000412446 UBN2Q6ZU65 1347 aa10.69□□□□□ -0.7
LINC00476-202ENST00000412446 CHL1O00533 1208 aa10.69□□□□□ -0.7
LINC00476-202ENST00000412446 NTSR2O95665 410 aa10.69□□□□□ -0.7
LINC00476-202ENST00000412446 MYL6BP14649 208 aa10.69□□□□□ -0.7
LINC00476-202ENST00000412446 IARSP41252 1262 aaKnown RBP10.69□□□□□ -0.7
LINC00476-202ENST00000412446 SH3D19Q5HYK7 790 aa10.69□□□□□ -0.7
LINC00476-202ENST00000412446 SLC10A5Q5PT55 438 aa10.69□□□□□ -0.7
LINC00476-202ENST00000412446 INTS3Q68E01 1043 aaKnown RBP10.69□□□□□ -0.7
LINC00476-202ENST00000412446 LRP10Q7Z4F1 713 aa10.69□□□□□ -0.7
LINC00476-202ENST00000412446 NLRP3Q96P20 1036 aa10.69□□□□□ -0.7
LINC00476-202ENST00000412446 ZNF408Q9H9D4 720 aa10.69□□□□□ -0.7
LINC00476-202ENST00000412446 ZNF277Q9NRM2 450 aaPredicted RBP10.69□□□□□ -0.7
LINC00476-202ENST00000412446 PODXL2Q9NZ53 605 aa10.69□□□□□ -0.7
LINC00476-202ENST00000412446 RRP7AQ9Y3A4 280 aaKnown RBP10.69□□□□□ -0.7
LINC00476-202ENST00000412446 NCOR1O75376 2440 aa10.68□□□□□ -0.7
LINC00476-202ENST00000412446 APBB1O00213 710 aa10.68□□□□□ -0.7
LINC00476-202ENST00000412446 SEC24BO95487 1268 aa10.68□□□□□ -0.7
LINC00476-202ENST00000412446 HSP90B1P14625 803 aaKnown RBP10.68□□□□□ -0.7
LINC00476-202ENST00000412446 RGMBQ6NW40 437 aa10.68□□□□□ -0.7
LINC00476-202ENST00000412446 TTLL7Q6ZT98 887 aa10.68□□□□□ -0.7
LINC00476-202ENST00000412446 USP50Q70EL3 339 aaPredicted RBP10.68□□□□□ -0.7
LINC00476-202ENST00000412446 Q7L0L9 218 aa10.68□□□□□ -0.7
LINC00476-202ENST00000412446 SUPT20HQ8NEM7 779 aa10.68□□□□□ -0.7
LINC00476-202ENST00000412446 EPAS1Q99814 870 aa10.68□□□□□ -0.7
LINC00476-202ENST00000412446 UTP14AQ9BVJ6 771 aaKnown RBP10.68□□□□□ -0.7
LINC00476-202ENST00000412446 ZBTB3Q9H5J0 574 aa10.68□□□□□ -0.7
LINC00476-202ENST00000412446 CDHR2Q9BYE9 1310 aa10.67□□□□□ -0.7
LINC00476-202ENST00000412446 CLCN1P35523 988 aa10.67□□□□□ -0.7
LINC00476-202ENST00000412446 EIF6P56537 245 aaKnown RBP10.67□□□□□ -0.7
LINC00476-202ENST00000412446 SUSD4Q5VX71 490 aa10.67□□□□□ -0.7
LINC00476-202ENST00000412446 PHOX2BQ99453 314 aa10.67□□□□□ -0.7
LINC00476-202ENST00000412446 THUMPD2Q9BTF0 503 aaKnown RBP10.67□□□□□ -0.7
LINC00476-202ENST00000412446 DBF4Q9UBU7 674 aaPredicted RBP10.67□□□□□ -0.7
LINC00476-202ENST00000412446 A6NJR5 290 aa10.66□□□□□ -0.7
LINC00476-202ENST00000412446 PPEF1O14829 653 aaPredicted RBP10.66□□□□□ -0.7
LINC00476-202ENST00000412446 BBOX1O75936 387 aa10.66□□□□□ -0.7
LINC00476-202ENST00000412446 MDM2Q00987 491 aaPredicted RBP10.66□□□□□ -0.7
LINC00476-202ENST00000412446 DDX10Q13206 875 aaKnown RBP10.66□□□□□ -0.7
LINC00476-202ENST00000412446 DLK2Q6UY11 383 aa10.66□□□□□ -0.7
LINC00476-202ENST00000412446 NUTM1Q86Y26 1132 aa10.66□□□□□ -0.7
LINC00476-202ENST00000412446 NGEFQ8N5V2 710 aa10.66□□□□□ -0.7
LINC00476-202ENST00000412446 DEFB123Q8N688 67 aa10.66□□□□□ -0.7
LINC00476-202ENST00000412446 CLUAP1Q96AJ1 413 aa10.66□□□□□ -0.7
LINC00476-202ENST00000412446 PRKRIP1Q9H875 184 aaPredicted RBP10.66□□□□□ -0.7
LINC00476-202ENST00000412446 GPCPD1Q9NPB8 672 aa10.66□□□□□ -0.7
LINC00476-202ENST00000412446 MTMR10Q9NXD2 777 aa10.66□□□□□ -0.7
LINC00476-202ENST00000412446 SH3TC1Q8TE82 1336 aa10.65□□□□□ -0.7
LINC00476-202ENST00000412446 SYNGAP1Q96PV0 1343 aa10.65□□□□□ -0.7
LINC00476-202ENST00000412446 FAM177BA6PVY3 158 aa10.65□□□□□ -0.7
LINC00476-202ENST00000412446 MAP3K7O43318 606 aa10.65□□□□□ -0.7
LINC00476-202ENST00000412446 TBC1D8O95759 1140 aa10.65□□□□□ -0.7
LINC00476-202ENST00000412446 EIF2S2P20042 333 aaKnown RBP10.65□□□□□ -0.7
LINC00476-202ENST00000412446 GPTP24298 496 aa10.65□□□□□ -0.7
LINC00476-202ENST00000412446 LMOD1P29536 600 aaPredicted RBP10.65□□□□□ -0.7
LINC00476-202ENST00000412446 TCIRG1Q13488 830 aa10.65□□□□□ -0.7
LINC00476-202ENST00000412446 HDGFL1Q5TGJ6 251 aa10.65□□□□□ -0.7
LINC00476-202ENST00000412446 PLBD2Q8NHP8 589 aa10.65□□□□□ -0.7
LINC00476-202ENST00000412446 RTFDC1Q9BY42 306 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms