RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 SIRT2Q8IXJ6 389 aa17.32■□□□□ 0.36
CPNE1-206ENST00000412056 UTRNP46939 3433 aa17.31■□□□□ 0.36
CPNE1-206ENST00000412056 RAD17O75943 681 aa17.31■□□□□ 0.36
CPNE1-206ENST00000412056 CXCL9Q07325 125 aa17.31■□□□□ 0.36
CPNE1-206ENST00000412056 DPY19L2Q6NUT2 758 aa17.31■□□□□ 0.36
CPNE1-206ENST00000412056 RPAP2Q8IXW5 612 aaPredicted RBP17.31■□□□□ 0.36
CPNE1-206ENST00000412056 KCNQ5Q9NR82 932 aa17.31■□□□□ 0.36
CPNE1-206ENST00000412056 CEP126Q9P2H0 1117 aa17.31■□□□□ 0.36
CPNE1-206ENST00000412056 KDM2BQ8NHM5 1336 aa17.3■□□□□ 0.36
CPNE1-206ENST00000412056 FGFR2P21802 821 aa17.3■□□□□ 0.36
CPNE1-206ENST00000412056 G3BP1Q13283 466 aaKnown RBP eCLIP17.3■□□□□ 0.364e-8■□□□□ 11
CPNE1-206ENST00000412056 PUM3Q15397 648 aaKnown RBP17.3■□□□□ 0.36
CPNE1-206ENST00000412056 COA1Q9GZY4 146 aa17.3■□□□□ 0.36
CPNE1-206ENST00000412056 GPBP1L1Q9HC44 474 aaPredicted RBP17.3■□□□□ 0.36
CPNE1-206ENST00000412056 NMRK2Q9NPI5 230 aa17.3■□□□□ 0.36
CPNE1-206ENST00000412056 GJA3Q9Y6H8 435 aa17.3■□□□□ 0.36
CPNE1-206ENST00000412056 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.3■□□□□ 0.36
CPNE1-206ENST00000412056 SURF6O75683 361 aaKnown RBP17.29■□□□□ 0.36
CPNE1-206ENST00000412056 TFCP2Q12800 502 aa17.29■□□□□ 0.36
CPNE1-206ENST00000412056 CIAPIN1Q6FI81 312 aa17.29■□□□□ 0.36
CPNE1-206ENST00000412056 NOP58Q9Y2X3 529 aaKnown RBP17.29■□□□□ 0.36
CPNE1-206ENST00000412056 ZNF609O15014 1411 aa17.29■□□□□ 0.36
CPNE1-206ENST00000412056 PSMD14O00487 310 aa17.28■□□□□ 0.36
CPNE1-206ENST00000412056 SASH1O94885 1247 aa17.28■□□□□ 0.36
CPNE1-206ENST00000412056 GYG1P46976 350 aa17.28■□□□□ 0.36
CPNE1-206ENST00000412056 OS9Q13438 667 aaPredicted RBP17.28■□□□□ 0.36
CPNE1-206ENST00000412056 ATP2B3Q16720 1220 aa17.28■□□□□ 0.36
CPNE1-206ENST00000412056 ZNF804AQ7Z570 1209 aa17.28■□□□□ 0.36
CPNE1-206ENST00000412056 GPC2Q8N158 579 aa17.28■□□□□ 0.36
CPNE1-206ENST00000412056 HMMRO75330 724 aa17.27■□□□□ 0.36
CPNE1-206ENST00000412056 IFIT1P09914 478 aaKnown RBP17.27■□□□□ 0.36
CPNE1-206ENST00000412056 SLC5A1P13866 664 aa17.27■□□□□ 0.36
CPNE1-206ENST00000412056 IRX6P78412 446 aaPredicted RBP17.27■□□□□ 0.36
CPNE1-206ENST00000412056 PODNQ7Z5L7 613 aa17.27■□□□□ 0.36
CPNE1-206ENST00000412056 L3MBTL3Q96JM7 780 aaPredicted RBP17.27■□□□□ 0.36
CPNE1-206ENST00000412056 RRAGCQ9HB90 399 aa17.27■□□□□ 0.36
CPNE1-206ENST00000412056 CD209Q9NNX6 404 aa17.27■□□□□ 0.36
CPNE1-206ENST00000412056 EXOC6BQ9Y2D4 811 aa17.27■□□□□ 0.36
CPNE1-206ENST00000412056 PCDHB15Q9Y5E8 787 aa17.27■□□□□ 0.36
CPNE1-206ENST00000412056 POTECB2RU33 542 aa17.26■□□□□ 0.35
CPNE1-206ENST00000412056 TNIP1Q15025 636 aa17.26■□□□□ 0.35
CPNE1-206ENST00000412056 EXOC6Q8TAG9 804 aa17.26■□□□□ 0.35
CPNE1-206ENST00000412056 LPIN2Q92539 896 aa17.26■□□□□ 0.35
CPNE1-206ENST00000412056 FAM84BQ96KN1 310 aaPredicted RBP17.26■□□□□ 0.35
CPNE1-206ENST00000412056 ADORA1P30542 326 aa17.25■□□□□ 0.35
CPNE1-206ENST00000412056 FBXO33Q7Z6M2 555 aa17.25■□□□□ 0.35
CPNE1-206ENST00000412056 FBXW7Q969H0 707 aa17.25■□□□□ 0.35
CPNE1-206ENST00000412056 A0A1B0GUL7 405 aa17.24■□□□□ 0.35
CPNE1-206ENST00000412056 USP17L3A6NCW0 530 aa17.24■□□□□ 0.35
CPNE1-206ENST00000412056 USP17L4A6NCW7 530 aa17.24■□□□□ 0.35
CPNE1-206ENST00000412056 KIF3CO14782 793 aa17.24■□□□□ 0.35
CPNE1-206ENST00000412056 VIL1P09327 827 aaKnown RBP17.24■□□□□ 0.35
CPNE1-206ENST00000412056 IL1R1P14778 569 aa17.24■□□□□ 0.35
CPNE1-206ENST00000412056 HIBADHP31937 336 aaKnown RBP17.24■□□□□ 0.35
CPNE1-206ENST00000412056 GMPSP49915 693 aaPredicted RBP17.24■□□□□ 0.35
CPNE1-206ENST00000412056 BCAMP50895 628 aa17.24■□□□□ 0.35
CPNE1-206ENST00000412056 SCNN1DP51172 638 aa17.24■□□□□ 0.35
CPNE1-206ENST00000412056 USP17L1Q7RTZ2 530 aa17.24■□□□□ 0.35
CPNE1-206ENST00000412056 ZBTB12Q9Y330 459 aaPredicted RBP17.24■□□□□ 0.35
CPNE1-206ENST00000412056 TIMM10P62072 90 aa17.23■□□□□ 0.35
CPNE1-206ENST00000412056 GTF2IP78347 998 aa17.23■□□□□ 0.35
CPNE1-206ENST00000412056 CAVIN4Q5BKX8 364 aa17.23■□□□□ 0.35
CPNE1-206ENST00000412056 TDRD7Q8NHU6 1098 aaKnown RBP17.23■□□□□ 0.35
CPNE1-206ENST00000412056 IQSEC3Q9UPP2 1182 aaPredicted RBP17.23■□□□□ 0.35
CPNE1-206ENST00000412056 AKAP2Q9Y2D5 859 aa17.23■□□□□ 0.35
CPNE1-206ENST00000412056 SHTN1A0MZ66 631 aa17.22■□□□□ 0.35
CPNE1-206ENST00000412056 APBB1O00213 710 aa17.22■□□□□ 0.35
CPNE1-206ENST00000412056 VEGFAP15692 232 aaPredicted RBP17.22■□□□□ 0.35
CPNE1-206ENST00000412056 EPS15P42566 896 aa17.22■□□□□ 0.35
CPNE1-206ENST00000412056 DACT2Q5SW24 774 aa17.22■□□□□ 0.35
CPNE1-206ENST00000412056 VPS37DQ86XT2 251 aa17.22■□□□□ 0.35
CPNE1-206ENST00000412056 ERC1Q8IUD2 1116 aa17.22■□□□□ 0.35
CPNE1-206ENST00000412056 MXD3Q9BW11 206 aa17.22■□□□□ 0.35
CPNE1-206ENST00000412056 HACL1Q9UJ83 578 aa17.22■□□□□ 0.35
CPNE1-206ENST00000412056 JAG2Q9Y219 1238 aa17.22■□□□□ 0.35
CPNE1-206ENST00000412056 ADAMTSL1Q8N6G6 1762 aa17.22■□□□□ 0.35
CPNE1-206ENST00000412056 COL1A1P02452 1464 aaPredicted RBP17.21■□□□□ 0.35
CPNE1-206ENST00000412056 LMOD1P29536 600 aaPredicted RBP17.21■□□□□ 0.35
CPNE1-206ENST00000412056 PHKA1P46020 1223 aa17.21■□□□□ 0.35
CPNE1-206ENST00000412056 HSP90AB4PQ58FF6 505 aa17.21■□□□□ 0.35
CPNE1-206ENST00000412056 TNNI3KQ59H18 835 aa17.21■□□□□ 0.35
CPNE1-206ENST00000412056 STRIP1Q5VSL9 837 aa17.21■□□□□ 0.35
CPNE1-206ENST00000412056 TTLL5Q6EMB2 1281 aa17.21■□□□□ 0.35
CPNE1-206ENST00000412056 RSBN1LQ6PCB5 846 aaPredicted RBP17.21■□□□□ 0.35
CPNE1-206ENST00000412056 RHPN1Q8TCX5 695 aa17.21■□□□□ 0.35
CPNE1-206ENST00000412056 XAGE2Q96GT9 111 aa17.21■□□□□ 0.35
CPNE1-206ENST00000412056 NEUROD6Q96NK8 337 aa17.21■□□□□ 0.35
CPNE1-206ENST00000412056 GPR108Q9NPR9 543 aa17.21■□□□□ 0.35
CPNE1-206ENST00000412056 GPRC5DQ9NZD1 345 aa17.21■□□□□ 0.35
CPNE1-206ENST00000412056 FPGT-TNNI3KV9GXZ4 949 aa17.21■□□□□ 0.35
CPNE1-206ENST00000412056 AKAP11Q9UKA4 1901 aa17.21■□□□□ 0.35
CPNE1-206ENST00000412056 IQCA1LA6NCM1 817 aa17.2■□□□□ 0.34
CPNE1-206ENST00000412056 TAF1DQ9H5J8 278 aaPredicted RBP17.2■□□□□ 0.34
CPNE1-206ENST00000412056 POLR2AP24928 1970 aaKnown RBP17.19■□□□□ 0.34
CPNE1-206ENST00000412056 RPS12P25398 132 aaKnown RBP17.19■□□□□ 0.34
CPNE1-206ENST00000412056 EPHX2P34913 555 aa17.19■□□□□ 0.34
CPNE1-206ENST00000412056 CHAF1AQ13111 956 aaPredicted RBP17.19■□□□□ 0.34
CPNE1-206ENST00000412056 AAMPQ13685 434 aa17.19■□□□□ 0.34
CPNE1-206ENST00000412056 CCDC102BQ68D86 513 aa17.19■□□□□ 0.34
CPNE1-206ENST00000412056 MICALL2Q8IY33 904 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms