RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 TNFRSF21O75509 655 aa9.05□□□□□ -0.96
HDAC9-205ENST00000411993 CDC25BP30305 580 aa9.05□□□□□ -0.96
HDAC9-205ENST00000411993 SETDB1Q15047 1291 aa9.05□□□□□ -0.96
HDAC9-205ENST00000411993 RSPO4Q2I0M5 234 aaPredicted RBP9.05□□□□□ -0.96
HDAC9-205ENST00000411993 FAM117BQ6P1L5 589 aa9.05□□□□□ -0.96
HDAC9-205ENST00000411993 TXNDC11Q6PKC3 985 aa9.05□□□□□ -0.96
HDAC9-205ENST00000411993 ACPPP15309 386 aa9.04□□□□□ -0.96
HDAC9-205ENST00000411993 IREB2P48200 963 aaKnown RBP9.04□□□□□ -0.96
HDAC9-205ENST00000411993 GJD3Q8N144 294 aa9.04□□□□□ -0.96
HDAC9-205ENST00000411993 WFDC12Q8WWY7 111 aa9.04□□□□□ -0.96
HDAC9-205ENST00000411993 FOXD3Q9UJU5 478 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-205ENST00000411993 BRPF3Q9ULD4 1205 aa9.04□□□□□ -0.96
HDAC9-205ENST00000411993 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-205ENST00000411993 EREGO14944 169 aa9.03□□□□□ -0.96
HDAC9-205ENST00000411993 TP53INP1Q96A56 240 aa9.03□□□□□ -0.96
HDAC9-205ENST00000411993 POP1Q99575 1024 aaKnown RBP9.03□□□□□ -0.96
HDAC9-205ENST00000411993 MRPL18Q9H0U6 180 aaKnown RBP9.03□□□□□ -0.96
HDAC9-205ENST00000411993 NOS3P29474 1203 aa9.02□□□□□ -0.97
HDAC9-205ENST00000411993 CABP4P57796 275 aa9.02□□□□□ -0.97
HDAC9-205ENST00000411993 NKAPLQ5M9Q1 402 aa9.02□□□□□ -0.97
HDAC9-205ENST00000411993 SH2B1Q9NRF2 756 aaPredicted RBP9.02□□□□□ -0.97
HDAC9-205ENST00000411993 PDE2AO00408 941 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-205ENST00000411993 NDUFB5O43674 189 aa9.01□□□□□ -0.97
HDAC9-205ENST00000411993 DYRK3O43781 588 aa9.01□□□□□ -0.97
HDAC9-205ENST00000411993 EDN3P14138 238 aa9.01□□□□□ -0.97
HDAC9-205ENST00000411993 EPHA1P21709 976 aa9.01□□□□□ -0.97
HDAC9-205ENST00000411993 CCER1Q8TC90 406 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-205ENST00000411993 CARD10Q9BWT7 1032 aa9.01□□□□□ -0.97
HDAC9-205ENST00000411993 AKTIPQ9H8T0 292 aa9.01□□□□□ -0.97
HDAC9-205ENST00000411993 DZANK1Q9NVP4 752 aa9.01□□□□□ -0.97
HDAC9-205ENST00000411993 AMOTL2Q9Y2J4 779 aa9.01□□□□□ -0.97
HDAC9-205ENST00000411993 TRPA1O75762 1119 aa9□□□□□ -0.97
HDAC9-205ENST00000411993 ADAMTSL4Q6UY14 1074 aa9□□□□□ -0.97
HDAC9-205ENST00000411993 TXNDC2Q86VQ3 553 aa9□□□□□ -0.97
HDAC9-205ENST00000411993 OSMRQ99650 979 aa9□□□□□ -0.97
HDAC9-205ENST00000411993 ADAM19Q9H013 955 aa9□□□□□ -0.97
HDAC9-205ENST00000411993 H3BRJ5 948 aa8.99□□□□□ -0.97
HDAC9-205ENST00000411993 FSCN2O14926 492 aa8.99□□□□□ -0.97
HDAC9-205ENST00000411993 CD68P34810 354 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-205ENST00000411993 GALNT11Q8NCW6 608 aa8.99□□□□□ -0.97
HDAC9-205ENST00000411993 HHIPQ96QV1 700 aa8.99□□□□□ -0.97
HDAC9-205ENST00000411993 ZKSCAN3Q9BRR0 538 aa8.99□□□□□ -0.97
HDAC9-205ENST00000411993 F8W735 103 aaPredicted RBP8.98□□□□□ -0.97
HDAC9-205ENST00000411993 NFKBIEO00221 500 aa8.98□□□□□ -0.97
HDAC9-205ENST00000411993 ALX3O95076 343 aa8.98□□□□□ -0.97
HDAC9-205ENST00000411993 ARHGAP4P98171 946 aa8.98□□□□□ -0.97
HDAC9-205ENST00000411993 TMEM102Q8N9M5 508 aaPredicted RBP8.98□□□□□ -0.97
HDAC9-205ENST00000411993 KLHL23Q8NBE8 558 aa8.98□□□□□ -0.97
HDAC9-205ENST00000411993 SEC31BQ9NQW1 1179 aa8.98□□□□□ -0.97
HDAC9-205ENST00000411993 H2AFB1P0C5Y9 115 aa8.97□□□□□ -0.97
HDAC9-205ENST00000411993 H2AFB2P0C5Z0 115 aa8.97□□□□□ -0.97
HDAC9-205ENST00000411993 FOXD4L6Q3SYB3 417 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-205ENST00000411993 FOXD4L3Q6VB84 417 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-205ENST00000411993 TMEM130Q8N3G9 435 aa8.97□□□□□ -0.97
HDAC9-205ENST00000411993 MEGF10Q96KG7 1140 aa8.97□□□□□ -0.97
HDAC9-205ENST00000411993 SSBP4Q9BWG4 385 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-205ENST00000411993 ZFYVE28Q9HCC9 887 aa8.97□□□□□ -0.97
HDAC9-205ENST00000411993 NEFLP07196 543 aa8.96□□□□□ -0.98
HDAC9-205ENST00000411993 GLB1P16278 677 aa8.96□□□□□ -0.98
HDAC9-205ENST00000411993 PIP4K2BP78356 416 aa8.96□□□□□ -0.98
HDAC9-205ENST00000411993 PDE3BQ13370 1112 aa8.96□□□□□ -0.98
HDAC9-205ENST00000411993 ACAD11Q709F0 780 aa8.96□□□□□ -0.98
HDAC9-205ENST00000411993 AGGF1Q8N302 714 aaeCLIP8.96□□□□□ -0.98
HDAC9-205ENST00000411993 TMC1Q8TDI8 760 aa8.96□□□□□ -0.98
HDAC9-205ENST00000411993 SLC7A3Q8WY07 619 aa8.96□□□□□ -0.98
HDAC9-205ENST00000411993 LATS2Q9NRM7 1088 aa8.96□□□□□ -0.98
HDAC9-205ENST00000411993 POLR3DP05423 398 aaPredicted RBP8.95□□□□□ -0.98
HDAC9-205ENST00000411993 ITGB7P26010 798 aa8.95□□□□□ -0.98
HDAC9-205ENST00000411993 ECM1Q16610 540 aa8.95□□□□□ -0.98
HDAC9-205ENST00000411993 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.95□□□□□ -0.98
HDAC9-205ENST00000411993 ASAP3Q8TDY4 903 aa8.95□□□□□ -0.98
HDAC9-205ENST00000411993 BSNDQ8WZ55 320 aa8.95□□□□□ -0.98
HDAC9-205ENST00000411993 WNT8BQ93098 351 aa8.95□□□□□ -0.98
HDAC9-205ENST00000411993 NXPE3Q969Y0 559 aa8.95□□□□□ -0.98
HDAC9-205ENST00000411993 KCNK4Q9NYG8 393 aa8.95□□□□□ -0.98
HDAC9-205ENST00000411993 WISP1O95388 367 aa8.94□□□□□ -0.98
HDAC9-205ENST00000411993 ARL4DP49703 201 aa8.94□□□□□ -0.98
HDAC9-205ENST00000411993 DUOXA2Q1HG44 320 aa8.94□□□□□ -0.98
HDAC9-205ENST00000411993 SOX13Q9UN79 622 aa8.94□□□□□ -0.98
HDAC9-205ENST00000411993 DDX3YO15523 660 aaKnown RBP8.93□□□□□ -0.98
HDAC9-205ENST00000411993 BRD1O95696 1058 aa8.93□□□□□ -0.98
HDAC9-205ENST00000411993 PRSS36Q5K4E3 855 aa8.93□□□□□ -0.98
HDAC9-205ENST00000411993 KLHDC7BQ96G42 594 aa8.93□□□□□ -0.98
HDAC9-205ENST00000411993 CITED4Q96RK1 184 aa8.93□□□□□ -0.98
HDAC9-205ENST00000411993 BHLHE41Q9C0J9 482 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-205ENST00000411993 OSGEPQ9NPF4 335 aa8.93□□□□□ -0.98
HDAC9-205ENST00000411993 IKBKEQ14164 716 aa8.92□□□□□ -0.98
HDAC9-205ENST00000411993 PEAR1Q5VY43 1037 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-205ENST00000411993 DZIP1LQ8IYY4 767 aaKnown RBP8.92□□□□□ -0.98
HDAC9-205ENST00000411993 UBASH3BQ8TF42 649 aa8.92□□□□□ -0.98
HDAC9-205ENST00000411993 FOXD4L4Q8WXT5 416 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-205ENST00000411993 FAM129BQ96TA1 746 aa8.92□□□□□ -0.98
HDAC9-205ENST00000411993 BIN2Q9UBW5 565 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-205ENST00000411993 SOWAHDA6NJG2 315 aa8.91□□□□□ -0.98
HDAC9-205ENST00000411993 ADAM11O75078 769 aa8.91□□□□□ -0.98
HDAC9-205ENST00000411993 NLRP12P59046 1061 aa8.91□□□□□ -0.98
HDAC9-205ENST00000411993 C19orf57Q0VDD7 668 aa8.91□□□□□ -0.98
HDAC9-205ENST00000411993 ZMYM1Q5SVZ6 1142 aa8.91□□□□□ -0.98
HDAC9-205ENST00000411993 Q6ZS46 218 aa8.91□□□□□ -0.98
HDAC9-205ENST00000411993 GALNT12Q8IXK2 581 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms