RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 CWC25Q9NXE8 425 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 RSF1Q96T23 1441 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 RBM47A0AV96 593 aaKnown RBP5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 SMIM24O75264 130 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 EVCP57679 992 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 SAMD14Q8IZD0 417 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 POLR3CQ9BUI4 534 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 NRDE2Q9H7Z3 1164 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 IFT122Q9HBG6 1241 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 RRAGDQ9NQL2 400 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 TADA3O75528 432 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 HDLBPQ00341 1268 aaKnown RBP5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 GIMAP6Q6P9H5 292 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 POTEDQ86YR6 584 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 CPXCR1Q8N123 301 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 NUF2Q9BZD4 464 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 XAB2Q9HCS7 855 aaKnown RBP5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 CFDP1Q9UEE9 299 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 PDZRN3Q9UPQ7 1066 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 GMEB1Q9Y692 573 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 THAP12O43422 761 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 FRAT2O75474 233 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 SNUPNO95149 360 aaKnown RBP5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 LRPAP1P30533 357 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 PIK3CAP42336 1068 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 PCYT1AP49585 367 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 MCM2P49736 904 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 ITGB3BPQ13352 177 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 LLGL2Q6P1M3 1020 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 SND1Q7KZF4 910 aaKnown RBP eCLIP5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 SIX5Q8N196 739 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 DPF3Q92784 378 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 IQCDQ96DY2 449 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 CAPN11Q9UMQ6 739 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 FAF1Q9UNN5 650 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 TSC22D4Q9Y3Q8 395 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 DMRT2Q9Y5R5 561 aa5.94□□□□□ -1.46
R3HDM1-204ENST00000410054 CCDC194A0A1B0GVG4 234 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 SKILP12757 684 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 KRT4P19013 534 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 RBM5P52756 815 aaKnown RBP eCLIP5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 BNIP1Q12981 228 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 HOMER1Q86YM7 354 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 TSC1Q92574 1164 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 DACT3Q96B18 629 aaPredicted RBP5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 VCXQ9H320 206 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 ZEB2O60315 1214 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 TMEM127O75204 238 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 FGFR1OPO95684 399 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 MYL1P05976 194 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 MAPK9P45984 424 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 VPS41P49754 854 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 GEMIN4P57678 1058 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 TTC39AQ5SRH9 613 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 ZCCHC8Q6NZY4 707 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 RAB3IL1Q8TBN0 382 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 RUFY2Q8WXA3 655 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 STMN2Q93045 179 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 PLVAPQ9BX97 442 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 VTI1BQ9UEU0 232 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 COL4A3BPQ9Y5P4 624 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 PALM3A6NDB9 673 aaPredicted RBP5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 IRF6O14896 467 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 TPPPO94811 219 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 OAS2P29728 719 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 PSEN1P49768 467 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 ANGPTL8Q6UXH0 198 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 PHC3Q8NDX5 983 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 ABTB1Q969K4 478 aaPredicted RBP5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 SMC6Q96SB8 1091 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 FAM129AQ9BZQ8 928 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 GBP3Q9H0R5 595 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 AATFQ9NY61 560 aaKnown RBP eCLIP5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 TRIM35Q9UPQ4 493 aa5.93□□□□□ -1.46
R3HDM1-204ENST00000410054 IQCA1LA6NCM1 817 aa5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 ST13P50502 369 aaKnown RBP5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 USTQ9Y2C2 406 aa5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 NUTM2FA1L443 756 aa5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 GRXCR2A6NFK2 248 aa5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 ZBBXA8MT70 800 aa5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 EBAG9O00559 213 aa5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 DNAJC6O75061 913 aa5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 MCM3P25205 808 aa5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 STK38Q15208 465 aa5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 TAF11Q15544 211 aa5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 TPD52L1Q16890 204 aaPredicted RBP5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 CAPRIN2Q6IMN6 1127 aaKnown RBP5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 MMS22LQ6ZRQ5 1243 aa5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 ST13P4Q8IZP2 240 aaPredicted RBP5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 SUN5Q8TC36 379 aa5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 TNIP3Q96KP6 325 aa5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 SLC52A1Q9NWF4 448 aa5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 TFIP11Q9UBB9 837 aaKnown RBP5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 CLIP2Q9UDT6 1046 aa5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 BECN2A8MW95 431 aa5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 APOL1O14791 398 aa5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 TIMM44O43615 452 aa5.92□□□□□ -1.46
R3HDM1-204ENST00000410054 STAMBPO95630 424 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms