RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 FZD9O00144 591 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 SLC10A3P09131 477 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 CYP4F22Q6NT55 531 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.87□□□□□ -1.79
RGPD3-202ENST00000409886 RASEFQ8IZ41 740 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 PRIMPOLQ96LW4 560 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 FUCA2Q9BTY2 467 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 CGNQ9P2M7 1197 aaKnown RBP3.87□□□□□ -1.79
RGPD3-202ENST00000409886 EDC4Q6P2E9 1401 aaKnown RBP3.87□□□□□ -1.79
RGPD3-202ENST00000409886 A0A1W2PP64 1363 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 NCBP1Q09161 790 aaKnown RBP3.87□□□□□ -1.79
RGPD3-202ENST00000409886 CCDC144BQ3MJ40 725 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 CCDC144CPQ8IYA2 1237 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 ANKRD24Q8TF21 1146 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 CENPJQ9HC77 1338 aaPredicted RBP3.87□□□□□ -1.79
RGPD3-202ENST00000409886 FKBP1BP68106 108 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 DMTNQ08495 405 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 ERFEQ4G0M1 354 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 IP6K1Q92551 441 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 POLD4Q9HCU8 107 aa3.87□□□□□ -1.79
RGPD3-202ENST00000409886 TNFRSF10AO00220 468 aa3.86□□□□□ -1.79
RGPD3-202ENST00000409886 NASPP49321 788 aaPredicted RBP3.86□□□□□ -1.79
RGPD3-202ENST00000409886 NLRP6P59044 892 aa3.86□□□□□ -1.79
RGPD3-202ENST00000409886 SLFNL1Q499Z3 407 aa3.86□□□□□ -1.79
RGPD3-202ENST00000409886 PLEKHO1Q53GL0 409 aaPredicted RBP3.86□□□□□ -1.79
RGPD3-202ENST00000409886 FOXR1Q6PIV2 292 aa3.86□□□□□ -1.79
RGPD3-202ENST00000409886 NECTIN2Q92692 538 aa3.86□□□□□ -1.79
RGPD3-202ENST00000409886 TCEANC2Q96MN5 208 aa3.86□□□□□ -1.79
RGPD3-202ENST00000409886 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.86□□□□□ -1.79
RGPD3-202ENST00000409886 ZKSCAN5Q9Y2L8 839 aa3.86□□□□□ -1.79
RGPD3-202ENST00000409886 RPTORQ8N122 1335 aa3.86□□□□□ -1.79
RGPD3-202ENST00000409886 ZNF500O60304 480 aaPredicted RBP3.86□□□□□ -1.79
RGPD3-202ENST00000409886 MRE11P49959 708 aa3.86□□□□□ -1.79
RGPD3-202ENST00000409886 APBB1O00213 710 aa3.86□□□□□ -1.79
RGPD3-202ENST00000409886 AOC2O75106 756 aa3.86□□□□□ -1.79
RGPD3-202ENST00000409886 PRPF40AO75400 957 aaKnown RBP3.86□□□□□ -1.79
RGPD3-202ENST00000409886 FKBP4Q02790 459 aaKnown RBP eCLIP3.86□□□□□ -1.79
RGPD3-202ENST00000409886 NOL8Q76FK4 1167 aaKnown RBP3.86□□□□□ -1.79
RGPD3-202ENST00000409886 FTOQ9C0B1 505 aaKnown RBP eCLIP3.86□□□□□ -1.79
RGPD3-202ENST00000409886 MYH13Q9UKX3 1938 aa3.86□□□□□ -1.79
RGPD3-202ENST00000409886 NEDD4P46934 1319 aa3.86□□□□□ -1.79
RGPD3-202ENST00000409886 ROCK2O75116 1388 aaKnown RBP3.86□□□□□ -1.79
RGPD3-202ENST00000409886 ZBTB7BO15156 539 aaPredicted RBP3.86□□□□□ -1.79
RGPD3-202ENST00000409886 ABL1P00519 1130 aa3.86□□□□□ -1.79
RGPD3-202ENST00000409886 CST9Q5W186 159 aa3.86□□□□□ -1.79
RGPD3-202ENST00000409886 CIAPIN1Q6FI81 312 aa3.86□□□□□ -1.79
RGPD3-202ENST00000409886 PDE6BP35913 854 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 LRIT3Q3SXY7 679 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 CNKSR1Q969H4 720 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 LOC102724428A0A0B4J2F2 783 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 RIOK3O14730 519 aaKnown RBP3.85□□□□□ -1.79
RGPD3-202ENST00000409886 SIK1P57059 783 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 ST5P78524 1137 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 FAM205AQ6ZU69 1335 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 GNPATO15228 680 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 COL1A1P02452 1464 aaPredicted RBP3.85□□□□□ -1.79
RGPD3-202ENST00000409886 SAFB2Q14151 953 aaKnown RBP eCLIP3.85□□□□□ -1.79
RGPD3-202ENST00000409886 PLEKHF1Q96S99 279 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 ATG3Q9NT62 314 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 ANKRD12Q6UB98 2062 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 SBNO2Q9Y2G9 1366 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 LMOD1P29536 600 aaPredicted RBP3.85□□□□□ -1.79
RGPD3-202ENST00000409886 KMT5BQ4FZB7 885 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 CC2D2BQ6DHV5 1058 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 MCTP1Q6DN14 999 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 C8orf58Q8NAV2 365 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 C1QTNF1Q9BXJ1 281 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 SUGCTQ9HAC7 445 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 ZZEF1O43149 2961 aa3.85□□□□□ -1.79
RGPD3-202ENST00000409886 H0YIN7 160 aa3.84□□□□□ -1.79
RGPD3-202ENST00000409886 POTEIP0CG38 1075 aa3.84□□□□□ -1.79
RGPD3-202ENST00000409886 POTEJP0CG39 1038 aa3.84□□□□□ -1.79
RGPD3-202ENST00000409886 RGMBQ6NW40 437 aa3.84□□□□□ -1.79
RGPD3-202ENST00000409886 DDR1Q08345 913 aa3.84□□□□□ -1.79
RGPD3-202ENST00000409886 CLEC17AQ6ZS10 378 aa3.84□□□□□ -1.79
RGPD3-202ENST00000409886 RTKN2Q8IZC4 609 aa3.84□□□□□ -1.79
RGPD3-202ENST00000409886 PUS7Q96PZ0 661 aaKnown RBP3.84□□□□□ -1.79
RGPD3-202ENST00000409886 PSMD1Q99460 953 aa3.84□□□□□ -1.79
RGPD3-202ENST00000409886 NLRP2Q9NX02 1062 aa3.84□□□□□ -1.79
RGPD3-202ENST00000409886 TNRC18O15417 2968 aaPredicted RBP3.84□□□□□ -1.79
RGPD3-202ENST00000409886 FKTNO75072 461 aa3.84□□□□□ -1.79
RGPD3-202ENST00000409886 KIAA1524Q8TCG1 905 aa3.84□□□□□ -1.79
RGPD3-202ENST00000409886 HTATIP2Q9BUP3 242 aa3.84□□□□□ -1.79
RGPD3-202ENST00000409886 CHMP5Q9NZZ3 219 aa3.84□□□□□ -1.79
RGPD3-202ENST00000409886 DDX49Q9Y6V7 483 aaKnown RBP3.84□□□□□ -1.79
RGPD3-202ENST00000409886 ASCC3Q8N3C0 2202 aaKnown RBP3.84□□□□□ -1.79
RGPD3-202ENST00000409886 SASH3O75995 380 aa3.84□□□□□ -1.8
RGPD3-202ENST00000409886 CCDC93Q567U6 631 aa3.84□□□□□ -1.8
RGPD3-202ENST00000409886 DNAJC21Q5F1R6 531 aaKnown RBP3.84□□□□□ -1.8
RGPD3-202ENST00000409886 AMIGO3Q86WK7 504 aa3.84□□□□□ -1.8
RGPD3-202ENST00000409886 PLEKHM2Q8IWE5 1019 aa3.84□□□□□ -1.8
RGPD3-202ENST00000409886 ADARB2Q9NS39 739 aaKnown RBP3.84□□□□□ -1.8
RGPD3-202ENST00000409886 GJB4Q9NTQ9 266 aa3.84□□□□□ -1.8
RGPD3-202ENST00000409886 NOB1Q9ULX3 412 aaKnown RBP3.84□□□□□ -1.8
RGPD3-202ENST00000409886 TMEM265A0A087WTH1 108 aa3.84□□□□□ -1.8
RGPD3-202ENST00000409886 NPHP1O15259 732 aa3.84□□□□□ -1.8
RGPD3-202ENST00000409886 ALDH1A1P00352 501 aa3.84□□□□□ -1.8
RGPD3-202ENST00000409886 RFC4P35249 363 aa3.84□□□□□ -1.8
RGPD3-202ENST00000409886 TM4SF4P48230 202 aa3.84□□□□□ -1.8
RGPD3-202ENST00000409886 ZNF445P59923 1031 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms