RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 NBPF15Q8N660 670 aa17.83■□□□□ 0.44
LYSMD4-204ENST00000409796 DSCC1Q9BVC3 393 aa17.83■□□□□ 0.44
LYSMD4-204ENST00000409796 ABCC6O95255 1503 aa17.82■□□□□ 0.44
LYSMD4-204ENST00000409796 ZMYM1Q5SVZ6 1142 aa17.82■□□□□ 0.44
LYSMD4-204ENST00000409796 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.82■□□□□ 0.44
LYSMD4-204ENST00000409796 BCL2L12Q9HB09 334 aa17.82■□□□□ 0.44
LYSMD4-204ENST00000409796 C19orf44Q9H6X5 657 aa17.82■□□□□ 0.44
LYSMD4-204ENST00000409796 NCOA5Q9HCD5 579 aaKnown RBP17.82■□□□□ 0.44
LYSMD4-204ENST00000409796 RCOR1Q9UKL0 485 aa17.82■□□□□ 0.44
LYSMD4-204ENST00000409796 E7EWF7 191 aa17.81■□□□□ 0.44
LYSMD4-204ENST00000409796 CHAF1AQ13111 956 aaPredicted RBP17.81■□□□□ 0.44
LYSMD4-204ENST00000409796 TTLL7Q6ZT98 887 aa17.81■□□□□ 0.44
LYSMD4-204ENST00000409796 CCAR1Q8IX12 1150 aaKnown RBP17.81■□□□□ 0.44
LYSMD4-204ENST00000409796 AGXT2Q9BYV1 514 aa17.81■□□□□ 0.44
LYSMD4-204ENST00000409796 GOLPH3LQ9H4A5 285 aa17.81■□□□□ 0.44
LYSMD4-204ENST00000409796 TJP1Q07157 1748 aa17.81■□□□□ 0.44
LYSMD4-204ENST00000409796 PPFIA3O75145 1194 aa17.81■□□□□ 0.44
LYSMD4-204ENST00000409796 HSPD1P10809 573 aaKnown RBP17.81■□□□□ 0.44
LYSMD4-204ENST00000409796 ZSCAN25Q6NSZ9 544 aa17.81■□□□□ 0.44
LYSMD4-204ENST00000409796 USP28Q96RU2 1077 aa17.81■□□□□ 0.44
LYSMD4-204ENST00000409796 IQCB1Q15051 598 aa17.8■□□□□ 0.44
LYSMD4-204ENST00000409796 LRRC24Q50LG9 513 aa17.8■□□□□ 0.44
LYSMD4-204ENST00000409796 C11orf57Q6ZUT1 292 aaPredicted RBP17.8■□□□□ 0.44
LYSMD4-204ENST00000409796 GPR108Q9NPR9 543 aa17.8■□□□□ 0.44
LYSMD4-204ENST00000409796 NAP1L2Q9ULW6 460 aaPredicted RBP17.8■□□□□ 0.44
LYSMD4-204ENST00000409796 NUP188Q5SRE5 1749 aa17.8■□□□□ 0.44
LYSMD4-204ENST00000409796 CHST3Q7LGC8 479 aa17.8■□□□□ 0.44
LYSMD4-204ENST00000409796 ZNF594Q96JF6 807 aaPredicted RBP17.8■□□□□ 0.44
LYSMD4-204ENST00000409796 CWC25Q9NXE8 425 aaPredicted RBP17.8■□□□□ 0.44
LYSMD4-204ENST00000409796 CLIP2Q9UDT6 1046 aa17.8■□□□□ 0.44
LYSMD4-204ENST00000409796 MAST3O60307 1309 aa17.8■□□□□ 0.44
LYSMD4-204ENST00000409796 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.79■□□□□ 0.44
LYSMD4-204ENST00000409796 IL15P40933 162 aaPredicted RBP17.79■□□□□ 0.44
LYSMD4-204ENST00000409796 GUCY1B3Q02153 619 aa17.79■□□□□ 0.44
LYSMD4-204ENST00000409796 CAVIN2O95810 425 aa17.79■□□□□ 0.44
LYSMD4-204ENST00000409796 IFIT1P09914 478 aaKnown RBP17.79■□□□□ 0.44
LYSMD4-204ENST00000409796 ILDR2Q71H61 639 aa17.79■□□□□ 0.44
LYSMD4-204ENST00000409796 SALL1Q9NSC2 1324 aa17.79■□□□□ 0.44
LYSMD4-204ENST00000409796 CCDC144BQ3MJ40 725 aa17.78■□□□□ 0.44
LYSMD4-204ENST00000409796 CCDC144CPQ8IYA2 1237 aa17.78■□□□□ 0.44
LYSMD4-204ENST00000409796 EYA2O00167 538 aa17.78■□□□□ 0.44
LYSMD4-204ENST00000409796 RNF113AO15541 343 aaKnown RBP17.78■□□□□ 0.44
LYSMD4-204ENST00000409796 PDIA3P30101 505 aaKnown RBP17.78■□□□□ 0.44
LYSMD4-204ENST00000409796 SNW1Q13573 536 aaKnown RBP17.78■□□□□ 0.44
LYSMD4-204ENST00000409796 CACTINQ8WUQ7 758 aaKnown RBP17.78■□□□□ 0.44
LYSMD4-204ENST00000409796 M0R2C6 588 aa17.77■□□□□ 0.44
LYSMD4-204ENST00000409796 CTAGE5O15320 804 aa17.77■□□□□ 0.44
LYSMD4-204ENST00000409796 TTLL5Q6EMB2 1281 aa17.77■□□□□ 0.44
LYSMD4-204ENST00000409796 A0A1B0GUL7 405 aa17.77■□□□□ 0.44
LYSMD4-204ENST00000409796 GOLGA6L19H0YKK7 550 aa17.77■□□□□ 0.44
LYSMD4-204ENST00000409796 CDC25BP30305 580 aa17.77■□□□□ 0.44
LYSMD4-204ENST00000409796 STX1AQ16623 288 aa17.77■□□□□ 0.44
LYSMD4-204ENST00000409796 CCDC73Q6ZRK6 1079 aa17.77■□□□□ 0.44
LYSMD4-204ENST00000409796 ZNF396Q96N95 335 aaPredicted RBP17.77■□□□□ 0.44
LYSMD4-204ENST00000409796 A0A087WWV3 80 aa17.76■□□□□ 0.43
LYSMD4-204ENST00000409796 A1BGP04217 495 aa17.76■□□□□ 0.43
LYSMD4-204ENST00000409796 ZNF274Q96GC6 653 aaPredicted RBP17.76■□□□□ 0.43
LYSMD4-204ENST00000409796 C16orf45Q96MC5 204 aaPredicted RBP17.76■□□□□ 0.43
LYSMD4-204ENST00000409796 PUS3Q9BZE2 481 aaKnown RBP17.76■□□□□ 0.43
LYSMD4-204ENST00000409796 ZBTB3Q9H5J0 574 aa17.76■□□□□ 0.43
LYSMD4-204ENST00000409796 CBX1P83916 185 aa17.76■□□□□ 0.43
LYSMD4-204ENST00000409796 SARM1Q6SZW1 724 aa17.76■□□□□ 0.43
LYSMD4-204ENST00000409796 ENGASEQ8NFI3 743 aa17.76■□□□□ 0.43
LYSMD4-204ENST00000409796 PARP4Q9UKK3 1724 aaKnown RBP17.76■□□□□ 0.43
LYSMD4-204ENST00000409796 PLEKHG2Q9H7P9 1386 aa17.76■□□□□ 0.43
LYSMD4-204ENST00000409796 SPEF2Q9C093 1822 aa17.76■□□□□ 0.43
LYSMD4-204ENST00000409796 SOCS7O14512 581 aa17.75■□□□□ 0.43
LYSMD4-204ENST00000409796 GPHNQ9NQX3 736 aaPredicted RBP17.75■□□□□ 0.43
LYSMD4-204ENST00000409796 TMEM94Q12767 1356 aa17.75■□□□□ 0.43
LYSMD4-204ENST00000409796 CARMIL3Q8ND23 1372 aa17.75■□□□□ 0.43
LYSMD4-204ENST00000409796 FDPSP14324 419 aaKnown RBP17.75■□□□□ 0.43
LYSMD4-204ENST00000409796 ATL3Q6DD88 541 aa17.75■□□□□ 0.43
LYSMD4-204ENST00000409796 TICAM2Q86XR7 235 aa17.75■□□□□ 0.43
LYSMD4-204ENST00000409796 FSIP1Q8NA03 581 aa17.75■□□□□ 0.43
LYSMD4-204ENST00000409796 OSBP2Q969R2 916 aa17.75■□□□□ 0.43
LYSMD4-204ENST00000409796 CTIFO43310 598 aaKnown RBP17.75■□□□□ 0.43
LYSMD4-204ENST00000409796 KINO60870 393 aaKnown RBP17.75■□□□□ 0.43
LYSMD4-204ENST00000409796 ATF3P18847 181 aa17.75■□□□□ 0.43
LYSMD4-204ENST00000409796 ME1P48163 572 aa17.75■□□□□ 0.43
LYSMD4-204ENST00000409796 FAM160A1Q05DH4 1040 aa17.75■□□□□ 0.43
LYSMD4-204ENST00000409796 ZNF335Q9H4Z2 1342 aaPredicted RBP17.75■□□□□ 0.43
LYSMD4-204ENST00000409796 NWD2Q9ULI1 1742 aa17.75■□□□□ 0.43
LYSMD4-204ENST00000409796 ATP2B3Q16720 1220 aa17.74■□□□□ 0.43
LYSMD4-204ENST00000409796 CCDC191Q8NCU4 936 aa17.74■□□□□ 0.43
LYSMD4-204ENST00000409796 UBR2Q8IWV8 1755 aa17.73■□□□□ 0.43
LYSMD4-204ENST00000409796 CIAO1O76071 339 aa17.73■□□□□ 0.43
LYSMD4-204ENST00000409796 TNNT1P13805 278 aa17.73■□□□□ 0.43
LYSMD4-204ENST00000409796 ARID5BQ14865 1188 aa17.73■□□□□ 0.43
LYSMD4-204ENST00000409796 PPP4R3BQ5MIZ7 849 aa17.73■□□□□ 0.43
LYSMD4-204ENST00000409796 DHX40Q8IX18 779 aaKnown RBP17.73■□□□□ 0.43
LYSMD4-204ENST00000409796 ERCC4Q92889 916 aaPredicted RBP17.73■□□□□ 0.43
LYSMD4-204ENST00000409796 MRFAP1L1Q96HT8 127 aa17.73■□□□□ 0.43
LYSMD4-204ENST00000409796 FKBP4Q02790 459 aaKnown RBP eCLIP17.73■□□□□ 0.43
LYSMD4-204ENST00000409796 ANKRD7Q92527 254 aa17.73■□□□□ 0.43
LYSMD4-204ENST00000409796 PCDHA7Q9UN72 937 aa17.73■□□□□ 0.43
LYSMD4-204ENST00000409796 BECN2A8MW95 431 aa17.72■□□□□ 0.43
LYSMD4-204ENST00000409796 HAND2P61296 217 aa17.72■□□□□ 0.43
LYSMD4-204ENST00000409796 OTUD7BQ6GQQ9 843 aa17.72■□□□□ 0.43
LYSMD4-204ENST00000409796 GTPBP4Q9BZE4 634 aaKnown RBP17.72■□□□□ 0.43
LYSMD4-204ENST00000409796 ANO10Q9NW15 660 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms