RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 MYO3BQ8WXR4 1341 aa18.73■□□□□ 0.59
CBX3-203ENST00000409747 ANKRD18BA2A2Z9 1011 aa18.73■□□□□ 0.59
CBX3-203ENST00000409747 HSPA8P11142 646 aaKnown RBP18.73■□□□□ 0.59
CBX3-203ENST00000409747 BEND3Q5T5X7 828 aa18.73■□□□□ 0.59
CBX3-203ENST00000409747 ZNF804BA4D1E1 1349 aa18.73■□□□□ 0.59
CBX3-203ENST00000409747 CAPN15O75808 1086 aa18.72■□□□□ 0.59
CBX3-203ENST00000409747 GMLQ99445 158 aa18.72■□□□□ 0.59
CBX3-203ENST00000409747 ADM5C9JUS6 153 aa18.71■□□□□ 0.59
CBX3-203ENST00000409747 F6X3S4 739 aa18.71■□□□□ 0.59
CBX3-203ENST00000409747 KCNJ4P48050 445 aa18.71■□□□□ 0.59
CBX3-203ENST00000409747 HUNKP57058 714 aa18.71■□□□□ 0.59
CBX3-203ENST00000409747 IFIT5Q13325 482 aaKnown RBP18.71■□□□□ 0.59
CBX3-203ENST00000409747 C2orf69Q8N8R5 385 aa18.71■□□□□ 0.59
CBX3-203ENST00000409747 GBA2Q9HCG7 927 aaPredicted RBP18.71■□□□□ 0.59
CBX3-203ENST00000409747 MYOZ2Q9NPC6 264 aa18.71■□□□□ 0.59
CBX3-203ENST00000409747 POLR2AP24928 1970 aaKnown RBP18.71■□□□□ 0.59
CBX3-203ENST00000409747 CA12O43570 354 aa18.71■□□□□ 0.59
CBX3-203ENST00000409747 AOC2O75106 756 aa18.71■□□□□ 0.59
CBX3-203ENST00000409747 MMP14P50281 582 aa18.71■□□□□ 0.59
CBX3-203ENST00000409747 STRIP1Q5VSL9 837 aa18.71■□□□□ 0.59
CBX3-203ENST00000409747 BRPF1P55201 1214 aaPredicted RBP18.7■□□□□ 0.58
CBX3-203ENST00000409747 NOGQ13253 232 aa18.7■□□□□ 0.58
CBX3-203ENST00000409747 SCARF1Q14162 830 aa18.7■□□□□ 0.58
CBX3-203ENST00000409747 OGFOD1Q8N543 542 aa18.7■□□□□ 0.58
CBX3-203ENST00000409747 ZNF521Q96K83 1311 aa18.7■□□□□ 0.58
CBX3-203ENST00000409747 PITPNM2Q9BZ72 1349 aa18.7■□□□□ 0.58
CBX3-203ENST00000409747 WTIPA6NIX2 430 aaPredicted RBP18.69■□□□□ 0.58
CBX3-203ENST00000409747 GRM8O00222 908 aa18.69■□□□□ 0.58
CBX3-203ENST00000409747 CHRNDQ07001 517 aa18.69■□□□□ 0.58
CBX3-203ENST00000409747 DACT2Q5SW24 774 aa18.69■□□□□ 0.58
CBX3-203ENST00000409747 ANGEL2Q5VTE6 544 aaKnown RBP18.69■□□□□ 0.58
CBX3-203ENST00000409747 FBXW7Q969H0 707 aa18.69■□□□□ 0.58
CBX3-203ENST00000409747 CHMP3Q9Y3E7 222 aa18.69■□□□□ 0.58
CBX3-203ENST00000409747 ZNF646O15015 1829 aaPredicted RBP18.69■□□□□ 0.58
CBX3-203ENST00000409747 ALDH1L1O75891 902 aa18.69■□□□□ 0.58
CBX3-203ENST00000409747 FOXO4P98177 505 aa18.69■□□□□ 0.58
CBX3-203ENST00000409747 C9orf78Q9NZ63 289 aaPredicted RBP18.69■□□□□ 0.58
CBX3-203ENST00000409747 A0A1B0GUL6 1792 aa18.67■□□□□ 0.58
CBX3-203ENST00000409747 CCDC57Q2TAC2 916 aa18.67■□□□□ 0.58
CBX3-203ENST00000409747 RGMBQ6NW40 437 aa18.67■□□□□ 0.58
CBX3-203ENST00000409747 SLC4A10Q6U841 1118 aa18.67■□□□□ 0.58
CBX3-203ENST00000409747 DLK2Q6UY11 383 aa18.67■□□□□ 0.58
CBX3-203ENST00000409747 TXNRD3Q86VQ6 643 aa18.67■□□□□ 0.58
CBX3-203ENST00000409747 CCDC102AQ96A19 550 aa18.67■□□□□ 0.58
CBX3-203ENST00000409747 CDCA5Q96FF9 252 aa18.67■□□□□ 0.58
CBX3-203ENST00000409747 SRCIN1Q9C0H9 1055 aa18.67■□□□□ 0.58
CBX3-203ENST00000409747 ASTN2O75129 1339 aaPredicted RBP18.67■□□□□ 0.58
CBX3-203ENST00000409747 TAF7LQ5H9L4 462 aa18.66■□□□□ 0.58
CBX3-203ENST00000409747 LMBR1LQ6UX01 489 aa18.66■□□□□ 0.58
CBX3-203ENST00000409747 TTLL5Q6EMB2 1281 aa18.66■□□□□ 0.58
CBX3-203ENST00000409747 HDAC9Q9UKV0 1011 aa18.66■□□□□ 0.58
CBX3-203ENST00000409747 E9PSI1 815 aa18.65■□□□□ 0.58
CBX3-203ENST00000409747 KLRK1P26718 216 aa18.65■□□□□ 0.58
CBX3-203ENST00000409747 FKBP1BP68106 108 aa18.65■□□□□ 0.58
CBX3-203ENST00000409747 C15orf52Q6ZUT6 534 aaKnown RBP18.65■□□□□ 0.58
CBX3-203ENST00000409747 PAPPA2Q9BXP8 1791 aa18.65■□□□□ 0.58
CBX3-203ENST00000409747 ZNF157P51786 506 aaPredicted RBP18.63■□□□□ 0.57
CBX3-203ENST00000409747 LDHAL6AQ6ZMR3 332 aa18.63■□□□□ 0.57
CBX3-203ENST00000409747 ZNF804AQ7Z570 1209 aa18.63■□□□□ 0.57
CBX3-203ENST00000409747 MXD3Q9BW11 206 aa18.63■□□□□ 0.57
CBX3-203ENST00000409747 CD209Q9NNX6 404 aa18.63■□□□□ 0.57
CBX3-203ENST00000409747 CNNM1Q9NRU3 951 aa18.63■□□□□ 0.57
CBX3-203ENST00000409747 PTPRCP08575 1304 aa18.63■□□□□ 0.57
CBX3-203ENST00000409747 TAF5LO75529 589 aa18.63■□□□□ 0.57
CBX3-203ENST00000409747 GTF2IP78347 998 aa18.63■□□□□ 0.57
CBX3-203ENST00000409747 EPHA10Q5JZY3 1008 aa18.63■□□□□ 0.57
CBX3-203ENST00000409747 FAM155AB1AL88 458 aaPredicted RBP18.62■□□□□ 0.57
CBX3-203ENST00000409747 WNT10BO00744 389 aa18.62■□□□□ 0.57
CBX3-203ENST00000409747 NBPF9Q3BBW0 867 aa18.62■□□□□ 0.57
CBX3-203ENST00000409747 IRS2Q9Y4H2 1338 aa18.61■□□□□ 0.57
CBX3-203ENST00000409747 KIAA0825Q8IV33 1275 aa18.61■□□□□ 0.57
CBX3-203ENST00000409747 HELBQ8NG08 1087 aaPredicted RBP18.61■□□□□ 0.57
CBX3-203ENST00000409747 UTYO14607 1347 aa18.61■□□□□ 0.57
CBX3-203ENST00000409747 SLC10A3P09131 477 aa18.6■□□□□ 0.57
CBX3-203ENST00000409747 NF2P35240 595 aa18.6■□□□□ 0.57
CBX3-203ENST00000409747 MRPL50Q8N5N7 158 aaKnown RBP18.6■□□□□ 0.57
CBX3-203ENST00000409747 TSKSQ9UJT2 592 aa18.6■□□□□ 0.57
CBX3-203ENST00000409747 IL1R1P14778 569 aa18.6■□□□□ 0.57
CBX3-203ENST00000409747 APOBEC3FQ8IUX4 373 aaKnown RBP18.6■□□□□ 0.57
CBX3-203ENST00000409747 ZNF594Q96JF6 807 aaPredicted RBP18.6■□□□□ 0.57
CBX3-203ENST00000409747 SASH1O94885 1247 aa18.59■□□□□ 0.57
CBX3-203ENST00000409747 FKBP1AP62942 108 aaKnown RBP18.59■□□□□ 0.57
CBX3-203ENST00000409747 REM2Q8IYK8 340 aaPredicted RBP18.59■□□□□ 0.57
CBX3-203ENST00000409747 SUCLG2Q96I99 432 aa18.59■□□□□ 0.57
CBX3-203ENST00000409747 SAGE1Q9NXZ1 904 aa18.59■□□□□ 0.57
CBX3-203ENST00000409747 COL1A1P02452 1464 aaPredicted RBP18.59■□□□□ 0.57
CBX3-203ENST00000409747 SNAP23O00161 211 aa18.58■□□□□ 0.57
CBX3-203ENST00000409747 KIF23Q02241 960 aaPredicted RBP18.58■□□□□ 0.57
CBX3-203ENST00000409747 ZIC5Q96T25 663 aa18.58■□□□□ 0.57
CBX3-203ENST00000409747 PLIN1O60240 522 aa18.57■□□□□ 0.56
CBX3-203ENST00000409747 NBPF7P0C2Y1 421 aaPredicted RBP18.57■□□□□ 0.56
CBX3-203ENST00000409747 SLFN5Q08AF3 891 aa18.57■□□□□ 0.56
CBX3-203ENST00000409747 UBE4AQ14139 1066 aa18.57■□□□□ 0.56
CBX3-203ENST00000409747 DLGAP5Q15398 846 aa18.57■□□□□ 0.56
CBX3-203ENST00000409747 ALDH1L2Q3SY69 923 aa18.57■□□□□ 0.56
CBX3-203ENST00000409747 RASAL3Q86YV0 1011 aa18.57■□□□□ 0.56
CBX3-203ENST00000409747 ABHD8Q96I13 439 aa18.57■□□□□ 0.56
CBX3-203ENST00000409747 MROH5Q6ZUA9 1318 aa18.56■□□□□ 0.56
CBX3-203ENST00000409747 TTLL12Q14166 644 aaPredicted RBP18.56■□□□□ 0.56
CBX3-203ENST00000409747 RABL6Q3YEC7 729 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms