RNA–Protein interactions for RNA: ENST00000409541.5

TMEM139-204, Transcript of transmembrane protein 139, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM139, Length 1,907 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-204ENST00000409541 NIP7Q9Y221 180 aaKnown RBP eCLIP14.09□□□□□ -0.15
TMEM139-204ENST00000409541 PDE8BO95263 885 aa14.09□□□□□ -0.15
TMEM139-204ENST00000409541 GJB2P29033 226 aa14.09□□□□□ -0.15
TMEM139-204ENST00000409541 ST3GAL1Q11201 340 aa14.09□□□□□ -0.15
TMEM139-204ENST00000409541 FOXD4L6Q3SYB3 417 aaPredicted RBP14.09□□□□□ -0.15
TMEM139-204ENST00000409541 PI16Q6UXB8 463 aa14.09□□□□□ -0.15
TMEM139-204ENST00000409541 FOXD4L3Q6VB84 417 aaPredicted RBP14.09□□□□□ -0.15
TMEM139-204ENST00000409541 M0R2C6 588 aa14.08□□□□□ -0.16
TMEM139-204ENST00000409541 STX6O43752 255 aa14.08□□□□□ -0.16
TMEM139-204ENST00000409541 ZFYP08048 801 aaPredicted RBP14.08□□□□□ -0.16
TMEM139-204ENST00000409541 SYT1P21579 422 aa14.08□□□□□ -0.16
TMEM139-204ENST00000409541 SF3B2Q13435 895 aaKnown RBP14.08□□□□□ -0.16
TMEM139-204ENST00000409541 TOB2Q14106 344 aaPredicted RBP14.08□□□□□ -0.16
TMEM139-204ENST00000409541 WASHC4Q2M389 1173 aa14.08□□□□□ -0.16
TMEM139-204ENST00000409541 CCDC125Q86Z20 511 aa14.08□□□□□ -0.16
TMEM139-204ENST00000409541 ISY1Q9ULR0 285 aaKnown RBP14.08□□□□□ -0.16
TMEM139-204ENST00000409541 LRP5O75197 1615 aa14.08□□□□□ -0.16
TMEM139-204ENST00000409541 DTNBO60941 627 aa14.07□□□□□ -0.16
TMEM139-204ENST00000409541 ZSCAN22P10073 491 aaPredicted RBP14.07□□□□□ -0.16
TMEM139-204ENST00000409541 HSPD1P10809 573 aaKnown RBP14.07□□□□□ -0.16
TMEM139-204ENST00000409541 DEFB132Q7Z7B7 95 aa14.07□□□□□ -0.16
TMEM139-204ENST00000409541 LINC00116Q8NCU8 138 aa14.07□□□□□ -0.16
TMEM139-204ENST00000409541 OSBP2Q969R2 916 aa14.07□□□□□ -0.16
TMEM139-204ENST00000409541 ZNF652Q9Y2D9 606 aa14.07□□□□□ -0.16
TMEM139-204ENST00000409541 MROH5Q6ZUA9 1318 aa14.07□□□□□ -0.16
TMEM139-204ENST00000409541 NTSR2O95665 410 aa14.07□□□□□ -0.16
TMEM139-204ENST00000409541 XRCC6P12956 609 aaKnown RBP eCLIP14.07□□□□□ -0.16
TMEM139-204ENST00000409541 MCAMP43121 646 aa14.07□□□□□ -0.16
TMEM139-204ENST00000409541 PUM3Q15397 648 aaKnown RBP14.07□□□□□ -0.16
TMEM139-204ENST00000409541 CAVIN1Q6NZI2 390 aaKnown RBP14.07□□□□□ -0.16
TMEM139-204ENST00000409541 HELBQ8NG08 1087 aaPredicted RBP14.07□□□□□ -0.16
TMEM139-204ENST00000409541 MYH14Q7Z406 1995 aaKnown RBP14.07□□□□□ -0.16
TMEM139-204ENST00000409541 HSP90B1P14625 803 aaKnown RBP14.06□□□□□ -0.16
TMEM139-204ENST00000409541 MRE11P49959 708 aa14.06□□□□□ -0.16
TMEM139-204ENST00000409541 KCNQ4P56696 695 aa14.06□□□□□ -0.16
TMEM139-204ENST00000409541 CCDC152Q4G0S7 254 aa14.06□□□□□ -0.16
TMEM139-204ENST00000409541 STOX1Q6ZVD7 989 aa14.06□□□□□ -0.16
TMEM139-204ENST00000409541 GPT2Q8TD30 523 aa14.06□□□□□ -0.16
TMEM139-204ENST00000409541 ZNF512BQ96KM6 892 aaPredicted RBP14.06□□□□□ -0.16
TMEM139-204ENST00000409541 MPHOSPH8Q99549 860 aa14.06□□□□□ -0.16
TMEM139-204ENST00000409541 SEC31BQ9NQW1 1179 aa14.06□□□□□ -0.16
TMEM139-204ENST00000409541 COL5A3P25940 1745 aaPredicted RBP14.06□□□□□ -0.16
TMEM139-204ENST00000409541 LPIN2Q92539 896 aa14.05□□□□□ -0.16
TMEM139-204ENST00000409541 APPBP2Q92624 585 aa14.05□□□□□ -0.16
TMEM139-204ENST00000409541 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.05□□□□□ -0.16
TMEM139-204ENST00000409541 GRPEL1Q9HAV7 217 aa14.05□□□□□ -0.16
TMEM139-204ENST00000409541 HMGB1P09429 215 aaKnown RBP14.05□□□□□ -0.16
TMEM139-204ENST00000409541 PHKA1P46020 1223 aa14.05□□□□□ -0.16
TMEM139-204ENST00000409541 STK3Q13188 491 aa14.05□□□□□ -0.16
TMEM139-204ENST00000409541 CCDC102BQ68D86 513 aa14.05□□□□□ -0.16
TMEM139-204ENST00000409541 Q6ZUG5 572 aa14.05□□□□□ -0.16
TMEM139-204ENST00000409541 PTF1AQ7RTS3 328 aa14.05□□□□□ -0.16
TMEM139-204ENST00000409541 GAS2L3Q86XJ1 694 aa14.05□□□□□ -0.16
TMEM139-204ENST00000409541 F13A1P00488 732 aa14.04□□□□□ -0.16
TMEM139-204ENST00000409541 FGD1P98174 961 aa14.04□□□□□ -0.16
TMEM139-204ENST00000409541 TTF1Q15361 905 aaPredicted RBP14.04□□□□□ -0.16
TMEM139-204ENST00000409541 A0A0G2JLW4 131 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 MBD3O95983 291 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 UQCRFS1P1P0C7P4 283 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 SLC5A1P13866 664 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 FGFR2P21802 821 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 IGHMBP2P38935 993 aaKnown RBP14.03□□□□□ -0.16
TMEM139-204ENST00000409541 ZSCAN23Q3MJ62 389 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 CLEC4GQ6UXB4 293 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 PUS7LQ9H0K6 701 aaKnown RBP14.03□□□□□ -0.16
TMEM139-204ENST00000409541 GDPD2Q9HCC8 539 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 MTMR6Q9Y217 621 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 ATP6V1DQ9Y5K8 247 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 ZNF831Q5JPB2 1677 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 VPS37CA5D8V6 355 aaPredicted RBP14.03□□□□□ -0.16
TMEM139-204ENST00000409541 E7EWF7 191 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 ARID4AP29374 1257 aaPredicted RBP14.03□□□□□ -0.16
TMEM139-204ENST00000409541 TTLL5Q6EMB2 1281 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 ZSCAN25Q6NSZ9 544 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 DHX32Q7L7V1 743 aaKnown RBP14.03□□□□□ -0.16
TMEM139-204ENST00000409541 BRF1Q92994 677 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 LRRC2Q9BYS8 371 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 PANK2Q9BZ23 570 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 RBM27Q9P2N5 1060 aaKnown RBP14.03□□□□□ -0.16
TMEM139-204ENST00000409541 CTNNA3Q9UI47 895 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 CNTNAP4Q9C0A0 1308 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 RTL9Q8NET4 1388 aa14.03□□□□□ -0.16
TMEM139-204ENST00000409541 DDX60Q8IY21 1712 aaKnown RBP14.03□□□□□ -0.16
TMEM139-204ENST00000409541 IDH1O75874 414 aaKnown RBP14.02□□□□□ -0.16
TMEM139-204ENST00000409541 SLC9C2Q5TAH2 1124 aa14.02□□□□□ -0.16
TMEM139-204ENST00000409541 LARP1BQ659C4 914 aaKnown RBP14.02□□□□□ -0.16
TMEM139-204ENST00000409541 PIH1D3Q9NQM4 214 aaKnown RBP14.02□□□□□ -0.16
TMEM139-204ENST00000409541 NSFL1CQ9UNZ2 370 aaKnown RBP14.02□□□□□ -0.16
TMEM139-204ENST00000409541 TNS1Q9HBL0 1735 aaKnown RBP14.02□□□□□ -0.16
TMEM139-204ENST00000409541 BCORQ6W2J9 1755 aa14.02□□□□□ -0.16
TMEM139-204ENST00000409541 SNAP23O00161 211 aa14.02□□□□□ -0.17
TMEM139-204ENST00000409541 FOXP2O15409 715 aa14.02□□□□□ -0.17
TMEM139-204ENST00000409541 GPAA1O43292 621 aa14.02□□□□□ -0.17
TMEM139-204ENST00000409541 PDCP20941 246 aa14.02□□□□□ -0.17
TMEM139-204ENST00000409541 ADD2P35612 726 aa14.02□□□□□ -0.17
TMEM139-204ENST00000409541 ZNF445P59923 1031 aa14.02□□□□□ -0.17
TMEM139-204ENST00000409541 USP48Q86UV5 1035 aa14.02□□□□□ -0.17
TMEM139-204ENST00000409541 GTF3C6Q969F1 213 aa14.02□□□□□ -0.17
TMEM139-204ENST00000409541 CNPY2Q9Y2B0 182 aa14.02□□□□□ -0.17
TMEM139-204ENST00000409541 IMMTQ16891 758 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms