RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 TPCN1Q9ULQ1 816 aa24.68■■□□□ 1.54
USP39-203ENST00000409470 RTL9Q8NET4 1388 aa24.68■■□□□ 1.54
USP39-203ENST00000409470 HSPD1P10809 573 aaKnown RBP24.68■■□□□ 1.54
USP39-203ENST00000409470 SLC5A1P13866 664 aa24.68■■□□□ 1.54
USP39-203ENST00000409470 ME3Q16798 604 aa24.68■■□□□ 1.54
USP39-203ENST00000409470 CCDC102BQ68D86 513 aa24.68■■□□□ 1.54
USP39-203ENST00000409470 ALDH8A1Q9H2A2 487 aaPredicted RBP24.68■■□□□ 1.54
USP39-203ENST00000409470 LAMB2P55268 1798 aa24.67■■□□□ 1.54
USP39-203ENST00000409470 WDR33Q9C0J8 1336 aaKnown RBP24.67■■□□□ 1.54
USP39-203ENST00000409470 FGFR2P21802 821 aa24.67■■□□□ 1.54
USP39-203ENST00000409470 BICDL1Q6ZP65 573 aa24.67■■□□□ 1.54
USP39-203ENST00000409470 SMIM5Q71RC9 77 aa24.67■■□□□ 1.54
USP39-203ENST00000409470 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.67■■□□□ 1.541e-6■■■□□ 14.8
USP39-203ENST00000409470 RPS6KA4O75676 772 aa24.66■■□□□ 1.54
USP39-203ENST00000409470 UQCRFS1P1P0C7P4 283 aa24.66■■□□□ 1.54
USP39-203ENST00000409470 PHKA1P46020 1223 aa24.66■■□□□ 1.54
USP39-203ENST00000409470 GNPATO15228 680 aa24.66■■□□□ 1.54
USP39-203ENST00000409470 TTF1Q15361 905 aaPredicted RBP24.66■■□□□ 1.54
USP39-203ENST00000409470 ERFEQ4G0M1 354 aa24.66■■□□□ 1.54
USP39-203ENST00000409470 DDX49Q9Y6V7 483 aaKnown RBP24.66■■□□□ 1.54
USP39-203ENST00000409470 APPBP2Q92624 585 aa24.65■■□□□ 1.54
USP39-203ENST00000409470 RGL2O15211 777 aa24.64■■□□□ 1.54
USP39-203ENST00000409470 GTF2E1P29083 439 aaPredicted RBP24.64■■□□□ 1.54
USP39-203ENST00000409470 ARID4AP29374 1257 aaPredicted RBP24.64■■□□□ 1.54
USP39-203ENST00000409470 ZSCAN25Q6NSZ9 544 aa24.64■■□□□ 1.54
USP39-203ENST00000409470 NECAB1Q8N987 351 aa24.64■■□□□ 1.54
USP39-203ENST00000409470 TOB2Q14106 344 aaPredicted RBP24.64■■□□□ 1.53
USP39-203ENST00000409470 TBC1D9BQ66K14 1250 aa24.64■■□□□ 1.53
USP39-203ENST00000409470 CDC5LQ99459 802 aaKnown RBP24.64■■□□□ 1.53
USP39-203ENST00000409470 LMBRD1Q9NUN5 540 aa24.64■■□□□ 1.53
USP39-203ENST00000409470 NARFQ9UHQ1 456 aa24.64■■□□□ 1.53
USP39-203ENST00000409470 TRPC5Q9UL62 973 aaPredicted RBP24.64■■□□□ 1.53
USP39-203ENST00000409470 AKAP11Q9UKA4 1901 aa24.63■■□□□ 1.53
USP39-203ENST00000409470 ZPR1O75312 459 aa24.63■■□□□ 1.53
USP39-203ENST00000409470 PRPF40AO75400 957 aaKnown RBP24.62■■□□□ 1.53
USP39-203ENST00000409470 GJB2P29033 226 aa24.62■■□□□ 1.53
USP39-203ENST00000409470 CHAMP1Q96JM3 812 aa24.62■■□□□ 1.53
USP39-203ENST00000409470 BCL2L12Q9HB09 334 aa24.62■■□□□ 1.53
USP39-203ENST00000409470 RTCBQ9Y3I0 505 aaKnown RBP24.62■■□□□ 1.53
USP39-203ENST00000409470 SCN7AQ01118 1682 aa24.62■■□□□ 1.53
USP39-203ENST00000409470 HMGB1P09429 215 aaKnown RBP24.62■■□□□ 1.53
USP39-203ENST00000409470 KLHL40Q2TBA0 621 aa24.62■■□□□ 1.53
USP39-203ENST00000409470 SRP68Q9UHB9 627 aaKnown RBP24.62■■□□□ 1.53
USP39-203ENST00000409470 SNAP23O00161 211 aa24.61■■□□□ 1.53
USP39-203ENST00000409470 ST3GAL1Q11201 340 aa24.61■■□□□ 1.53
USP39-203ENST00000409470 STOX1Q6ZVD7 989 aa24.61■■□□□ 1.53
USP39-203ENST00000409470 SEPT12Q8IYM1 358 aa24.61■■□□□ 1.53
USP39-203ENST00000409470 PUS7LQ9H0K6 701 aaKnown RBP24.61■■□□□ 1.53
USP39-203ENST00000409470 ARAP2Q8WZ64 1704 aa24.61■■□□□ 1.53
USP39-203ENST00000409470 MYH7P12883 1935 aa24.61■■□□□ 1.53
USP39-203ENST00000409470 STX6O43752 255 aa24.61■■□□□ 1.53
USP39-203ENST00000409470 IDH1O75874 414 aaKnown RBP24.61■■□□□ 1.53
USP39-203ENST00000409470 SYT1P21579 422 aa24.61■■□□□ 1.53
USP39-203ENST00000409470 SLC9C2Q5TAH2 1124 aa24.61■■□□□ 1.53
USP39-203ENST00000409470 Q6ZUG5 572 aa24.61■■□□□ 1.53
USP39-203ENST00000409470 SETDB2Q96T68 719 aa24.61■■□□□ 1.53
USP39-203ENST00000409470 PIH1D3Q9NQM4 214 aaKnown RBP24.61■■□□□ 1.53
USP39-203ENST00000409470 CTNNA3Q9UI47 895 aa24.61■■□□□ 1.53
USP39-203ENST00000409470 ATRNO75882 1429 aa24.6■■□□□ 1.53
USP39-203ENST00000409470 GOLGA6L3A6NEY3 463 aa24.6■■□□□ 1.53
USP39-203ENST00000409470 ADD2P35612 726 aa24.6■■□□□ 1.53
USP39-203ENST00000409470 FGD1P98174 961 aa24.6■■□□□ 1.53
USP39-203ENST00000409470 CHRNDQ07001 517 aa24.6■■□□□ 1.53
USP39-203ENST00000409470 L1TD1Q5T7N2 865 aaKnown RBP24.6■■□□□ 1.53
USP39-203ENST00000409470 ONECUT3O60422 494 aaPredicted RBP24.59■■□□□ 1.53
USP39-203ENST00000409470 SF3B3Q15393 1217 aaKnown RBP24.59■■□□□ 1.53
USP39-203ENST00000409470 AEBP2Q6ZN18 517 aaPredicted RBP24.59■■□□□ 1.53
USP39-203ENST00000409470 ANKRD18AQ8IVF6 992 aa24.59■■□□□ 1.53
USP39-203ENST00000409470 NYXQ9GZU5 481 aa24.59■■□□□ 1.53
USP39-203ENST00000409470 ZSCAN22P10073 491 aaPredicted RBP24.59■■□□□ 1.53
USP39-203ENST00000409470 NCLP19338 710 aaKnown RBP24.59■■□□□ 1.53
USP39-203ENST00000409470 C3orf67Q6ZVT6 689 aa24.59■■□□□ 1.53
USP39-203ENST00000409470 SPATA5Q8NB90 893 aa24.59■■□□□ 1.53
USP39-203ENST00000409470 E7EWF7 191 aa24.58■■□□□ 1.53
USP39-203ENST00000409470 GPAA1O43292 621 aa24.58■■□□□ 1.53
USP39-203ENST00000409470 FOXD4L6Q3SYB3 417 aaPredicted RBP24.58■■□□□ 1.53
USP39-203ENST00000409470 TTLL5Q6EMB2 1281 aa24.58■■□□□ 1.53
USP39-203ENST00000409470 FOXD4L3Q6VB84 417 aaPredicted RBP24.58■■□□□ 1.53
USP39-203ENST00000409470 DHX32Q7L7V1 743 aaKnown RBP24.58■■□□□ 1.53
USP39-203ENST00000409470 A0A0G2JLW4 131 aa24.57■■□□□ 1.52
USP39-203ENST00000409470 STK3Q13188 491 aa24.57■■□□□ 1.52
USP39-203ENST00000409470 DTNBO60941 627 aa24.57■■□□□ 1.52
USP39-203ENST00000409470 NBPF5PQ86XG9 351 aaPredicted RBP24.57■■□□□ 1.52
USP39-203ENST00000409470 RASGRF1Q13972 1273 aa24.56■■□□□ 1.52
USP39-203ENST00000409470 UBE3CQ15386 1083 aa24.56■■□□□ 1.52
USP39-203ENST00000409470 IMMTQ16891 758 aaKnown RBP24.56■■□□□ 1.52
USP39-203ENST00000409470 SLC10A5Q5PT55 438 aa24.56■■□□□ 1.52
USP39-203ENST00000409470 ARHGEF1Q92888 912 aaKnown RBP24.56■■□□□ 1.52
USP39-203ENST00000409470 LRRC2Q9BYS8 371 aa24.56■■□□□ 1.52
USP39-203ENST00000409470 SBF2Q86WG5 1849 aa24.56■■□□□ 1.52
USP39-203ENST00000409470 LY75O60449 1722 aa24.55■■□□□ 1.52
USP39-203ENST00000409470 ZNF532Q9HCE3 1301 aa24.55■■□□□ 1.52
USP39-203ENST00000409470 FOXP2O15409 715 aa24.55■■□□□ 1.52
USP39-203ENST00000409470 FGAP02671 866 aa24.55■■□□□ 1.52
USP39-203ENST00000409470 PDE6AP16499 860 aa24.55■■□□□ 1.52
USP39-203ENST00000409470 BCAMP50895 628 aa24.55■■□□□ 1.52
USP39-203ENST00000409470 BRF1Q92994 677 aa24.55■■□□□ 1.52
USP39-203ENST00000409470 LAMA4Q16363 1823 aa24.55■■□□□ 1.52
USP39-203ENST00000409470 FSD2A1L4K1 749 aa24.54■■□□□ 1.52
USP39-203ENST00000409470 WWC3Q9ULE0 1092 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms