RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 TPCN1Q9ULQ1 816 aa11.89□□□□□ -0.51
CUL1-202ENST00000409469 MAST3O60307 1309 aa11.89□□□□□ -0.51
CUL1-202ENST00000409469 ANKRD36CQ5JPF3 1778 aa11.89□□□□□ -0.51
CUL1-202ENST00000409469 PHKA1P46020 1223 aa11.89□□□□□ -0.51
CUL1-202ENST00000409469 MCM2P49736 904 aa11.89□□□□□ -0.51
CUL1-202ENST00000409469 WASHC4Q2M389 1173 aa11.89□□□□□ -0.51
CUL1-202ENST00000409469 FNBP4Q8N3X1 1017 aaPredicted RBP11.89□□□□□ -0.51
CUL1-202ENST00000409469 LIMCH1Q9UPQ0 1083 aa11.89□□□□□ -0.51
CUL1-202ENST00000409469 PHF14O94880 888 aa11.88□□□□□ -0.51
CUL1-202ENST00000409469 CHST3Q7LGC8 479 aa11.88□□□□□ -0.51
CUL1-202ENST00000409469 SLC51AQ86UW1 340 aa11.88□□□□□ -0.51
CUL1-202ENST00000409469 VGLL2Q8N8G2 317 aa11.88□□□□□ -0.51
CUL1-202ENST00000409469 IQSEC3Q9UPP2 1182 aaPredicted RBP11.88□□□□□ -0.51
CUL1-202ENST00000409469 PRPF40AO75400 957 aaKnown RBP11.88□□□□□ -0.51
CUL1-202ENST00000409469 NTSR2O95665 410 aa11.88□□□□□ -0.51
CUL1-202ENST00000409469 STOX1Q6ZVD7 989 aa11.88□□□□□ -0.51
CUL1-202ENST00000409469 RPAP1Q9BWH6 1393 aaPredicted RBP11.87□□□□□ -0.51
CUL1-202ENST00000409469 EPB41L2O43491 1005 aaKnown RBP11.87□□□□□ -0.51
CUL1-202ENST00000409469 HAND2P61296 217 aa11.87□□□□□ -0.51
CUL1-202ENST00000409469 ERFEQ4G0M1 354 aa11.87□□□□□ -0.51
CUL1-202ENST00000409469 PUS7LQ9H0K6 701 aaKnown RBP11.87□□□□□ -0.51
CUL1-202ENST00000409469 AKAP2Q9Y2D5 859 aa11.87□□□□□ -0.51
CUL1-202ENST00000409469 PDE8BO95263 885 aa11.87□□□□□ -0.51
CUL1-202ENST00000409469 USPL1Q5W0Q7 1092 aa11.87□□□□□ -0.51
CUL1-202ENST00000409469 BLOC1S2Q6QNY1 142 aa11.87□□□□□ -0.51
CUL1-202ENST00000409469 NSFL1CQ9UNZ2 370 aaKnown RBP11.87□□□□□ -0.51
CUL1-202ENST00000409469 AFF2P51816 1311 aa11.86□□□□□ -0.51
CUL1-202ENST00000409469 GNPATO15228 680 aa11.86□□□□□ -0.51
CUL1-202ENST00000409469 ZMYM1Q5SVZ6 1142 aa11.86□□□□□ -0.51
CUL1-202ENST00000409469 TBC1D9BQ66K14 1250 aa11.86□□□□□ -0.51
CUL1-202ENST00000409469 KCNB2Q92953 911 aa11.86□□□□□ -0.51
CUL1-202ENST00000409469 DDX49Q9Y6V7 483 aaKnown RBP11.86□□□□□ -0.51
CUL1-202ENST00000409469 MYH3P11055 1940 aa11.86□□□□□ -0.51
CUL1-202ENST00000409469 RNF113AO15541 343 aaKnown RBP11.86□□□□□ -0.51
CUL1-202ENST00000409469 IDH1O75874 414 aaKnown RBP11.86□□□□□ -0.51
CUL1-202ENST00000409469 HSPD1P10809 573 aaKnown RBP11.86□□□□□ -0.51
CUL1-202ENST00000409469 TOB2Q14106 344 aaPredicted RBP11.86□□□□□ -0.51
CUL1-202ENST00000409469 SMARCC1Q92922 1105 aaPredicted RBP11.86□□□□□ -0.51
CUL1-202ENST00000409469 MPHOSPH8Q99549 860 aa11.86□□□□□ -0.51
CUL1-202ENST00000409469 TAF1P21675 1872 aa11.86□□□□□ -0.51
CUL1-202ENST00000409469 BRD1O95696 1058 aa11.85□□□□□ -0.51
CUL1-202ENST00000409469 RNF20Q5VTR2 975 aa11.85□□□□□ -0.51
CUL1-202ENST00000409469 CCDC102BQ68D86 513 aa11.85□□□□□ -0.51
CUL1-202ENST00000409469 RBM27Q9P2N5 1060 aaKnown RBP11.85□□□□□ -0.51
CUL1-202ENST00000409469 FOXP2O15409 715 aa11.85□□□□□ -0.51
CUL1-202ENST00000409469 RPS6KB1P23443 525 aa11.85□□□□□ -0.51
CUL1-202ENST00000409469 GJB2P29033 226 aa11.85□□□□□ -0.51
CUL1-202ENST00000409469 BBXQ8WY36 941 aaPredicted RBP11.85□□□□□ -0.51
CUL1-202ENST00000409469 INTS4Q96HW7 963 aaKnown RBP11.85□□□□□ -0.51
CUL1-202ENST00000409469 PSMD1Q99460 953 aa11.85□□□□□ -0.51
CUL1-202ENST00000409469 BCL2L12Q9HB09 334 aa11.85□□□□□ -0.51
CUL1-202ENST00000409469 PIH1D3Q9NQM4 214 aaKnown RBP11.85□□□□□ -0.51
CUL1-202ENST00000409469 CCNL1Q9UK58 526 aaPredicted RBP11.85□□□□□ -0.51
CUL1-202ENST00000409469 GJD4Q96KN9 370 aaPredicted RBP11.85□□□□□ -0.51
CUL1-202ENST00000409469 PANK2Q9BZ23 570 aa11.85□□□□□ -0.51
CUL1-202ENST00000409469 LMBRD1Q9NUN5 540 aa11.85□□□□□ -0.51
CUL1-202ENST00000409469 GAS2L3Q86XJ1 694 aa11.84□□□□□ -0.51
CUL1-202ENST00000409469 IL27Q8NEV9 243 aa11.84□□□□□ -0.51
CUL1-202ENST00000409469 CERKQ8TCT0 537 aa11.84□□□□□ -0.51
CUL1-202ENST00000409469 TM6SF1Q9BZW5 370 aa11.84□□□□□ -0.51
CUL1-202ENST00000409469 DENND2AQ9ULE3 1009 aa11.84□□□□□ -0.51
CUL1-202ENST00000409469 SMC3Q9UQE7 1217 aa11.84□□□□□ -0.51
CUL1-202ENST00000409469 SPEF2Q9C093 1822 aa11.84□□□□□ -0.51
CUL1-202ENST00000409469 GOLGA6L22H0YM25 854 aa11.84□□□□□ -0.51
CUL1-202ENST00000409469 SYT1P21579 422 aa11.84□□□□□ -0.51
CUL1-202ENST00000409469 GTF2E1P29083 439 aaPredicted RBP11.84□□□□□ -0.51
CUL1-202ENST00000409469 BCAMP50895 628 aa11.84□□□□□ -0.51
CUL1-202ENST00000409469 CAVIN1Q6NZI2 390 aaKnown RBP11.84□□□□□ -0.51
CUL1-202ENST00000409469 NEK1Q96PY6 1258 aa11.84□□□□□ -0.51
CUL1-202ENST00000409469 WWC3Q9ULE0 1092 aa11.84□□□□□ -0.51
CUL1-202ENST00000409469 MYO5AQ9Y4I1 1855 aaKnown RBP11.83□□□□□ -0.52
CUL1-202ENST00000409469 SLC9C2Q5TAH2 1124 aa11.83□□□□□ -0.52
CUL1-202ENST00000409469 Q6ZUG5 572 aa11.83□□□□□ -0.52
CUL1-202ENST00000409469 GPT2Q8TD30 523 aa11.83□□□□□ -0.52
CUL1-202ENST00000409469 GPHNQ9NQX3 736 aaPredicted RBP11.83□□□□□ -0.52
CUL1-202ENST00000409469 ABCC12Q96J65 1359 aa11.83□□□□□ -0.52
CUL1-202ENST00000409469 PSMA5P28066 241 aa11.83□□□□□ -0.52
CUL1-202ENST00000409469 FOSBP53539 338 aa11.83□□□□□ -0.52
CUL1-202ENST00000409469 RASGRF1Q13972 1273 aa11.83□□□□□ -0.52
CUL1-202ENST00000409469 BRF1Q92994 677 aa11.83□□□□□ -0.52
CUL1-202ENST00000409469 HELLSQ9NRZ9 838 aa11.83□□□□□ -0.52
CUL1-202ENST00000409469 U3KPZ7 1027 aaPredicted RBP11.83□□□□□ -0.52
CUL1-202ENST00000409469 VPS37CA5D8V6 355 aaPredicted RBP11.82□□□□□ -0.52
CUL1-202ENST00000409469 PUM3Q15397 648 aaKnown RBP11.82□□□□□ -0.52
CUL1-202ENST00000409469 CCDC152Q4G0S7 254 aa11.82□□□□□ -0.52
CUL1-202ENST00000409469 PARP10Q53GL7 1025 aa11.82□□□□□ -0.52
CUL1-202ENST00000409469 CLEC17AQ6ZS10 378 aa11.82□□□□□ -0.52
CUL1-202ENST00000409469 FERMT3Q86UX7 667 aa11.82□□□□□ -0.52
CUL1-202ENST00000409469 RAB11FIP4Q86YS3 637 aa11.82□□□□□ -0.52
CUL1-202ENST00000409469 TEX2Q8IWB9 1127 aa11.82□□□□□ -0.52
CUL1-202ENST00000409469 SEPT12Q8IYM1 358 aa11.82□□□□□ -0.52
CUL1-202ENST00000409469 NKX2-3Q8TAU0 364 aa11.82□□□□□ -0.52
CUL1-202ENST00000409469 COL5A3P25940 1745 aaPredicted RBP11.82□□□□□ -0.52
CUL1-202ENST00000409469 DDX60Q8IY21 1712 aaKnown RBP11.82□□□□□ -0.52
CUL1-202ENST00000409469 JAK2O60674 1132 aa11.82□□□□□ -0.52
CUL1-202ENST00000409469 CHRNDQ07001 517 aa11.82□□□□□ -0.52
CUL1-202ENST00000409469 FAM173BQ6P4H8 233 aa11.82□□□□□ -0.52
CUL1-202ENST00000409469 CELF1Q92879 486 aaKnown RBP11.82□□□□□ -0.52
CUL1-202ENST00000409469 HMG20BQ9P0W2 317 aa11.82□□□□□ -0.52
CUL1-202ENST00000409469 BTAF1O14981 1849 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms