RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 NDUFB9Q9Y6M9 179 aa20.54■□□□□ 0.88
SSB-202ENST00000409333 KLRK1P26718 216 aa20.54■□□□□ 0.88
SSB-202ENST00000409333 TTC39AQ5SRH9 613 aa20.54■□□□□ 0.88
SSB-202ENST00000409333 CCDC102BQ68D86 513 aa20.54■□□□□ 0.88
SSB-202ENST00000409333 CNKSR1Q969H4 720 aa20.54■□□□□ 0.88
SSB-202ENST00000409333 NSFL1CQ9UNZ2 370 aaKnown RBP20.54■□□□□ 0.88
SSB-202ENST00000409333 ZNF804BA4D1E1 1349 aa20.54■□□□□ 0.88
SSB-202ENST00000409333 KCNA3P22001 575 aa20.53■□□□□ 0.88
SSB-202ENST00000409333 PHKA1P46020 1223 aa20.53■□□□□ 0.88
SSB-202ENST00000409333 RILPL2Q969X0 211 aa20.53■□□□□ 0.88
SSB-202ENST00000409333 PPP1R1BQ9UD71 204 aaPredicted RBP20.53■□□□□ 0.88
SSB-202ENST00000409333 DOCK2Q92608 1830 aa20.53■□□□□ 0.88
SSB-202ENST00000409333 KLHL34Q8N239 644 aa20.52■□□□□ 0.88
SSB-202ENST00000409333 SCARF1Q14162 830 aa20.51■□□□□ 0.87
SSB-202ENST00000409333 SPON1Q9HCB6 807 aa20.51■□□□□ 0.87
SSB-202ENST00000409333 PODXL2Q9NZ53 605 aa20.51■□□□□ 0.87
SSB-202ENST00000409333 IRS2Q9Y4H2 1338 aa20.51■□□□□ 0.87
SSB-202ENST00000409333 GYG1P46976 350 aa20.51■□□□□ 0.87
SSB-202ENST00000409333 BCAMP50895 628 aa20.51■□□□□ 0.87
SSB-202ENST00000409333 TGFB2P61812 414 aa20.51■□□□□ 0.87
SSB-202ENST00000409333 EDC3Q96F86 508 aaKnown RBP20.51■□□□□ 0.87
SSB-202ENST00000409333 GPR101Q96P66 508 aaPredicted RBP20.51■□□□□ 0.87
SSB-202ENST00000409333 DNAJC2Q99543 621 aaKnown RBP20.51■□□□□ 0.87
SSB-202ENST00000409333 HAUS7Q99871 368 aa20.51■□□□□ 0.87
SSB-202ENST00000409333 LEMD3Q9Y2U8 911 aa20.51■□□□□ 0.87
SSB-202ENST00000409333 CHD4Q14839 1912 aa20.51■□□□□ 0.87
SSB-202ENST00000409333 UFL1O94874 794 aa20.5■□□□□ 0.87
SSB-202ENST00000409333 ARID4AP29374 1257 aaPredicted RBP20.5■□□□□ 0.87
SSB-202ENST00000409333 TXNRD3Q86VQ6 643 aa20.5■□□□□ 0.87
SSB-202ENST00000409333 CNTROBQ8N137 903 aa20.5■□□□□ 0.87
SSB-202ENST00000409333 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.5■□□□□ 0.87
SSB-202ENST00000409333 BACH2Q9BYV9 841 aa20.5■□□□□ 0.87
SSB-202ENST00000409333 ZNF219Q9P2Y4 722 aaPredicted RBP20.5■□□□□ 0.87
SSB-202ENST00000409333 MCAMP43121 646 aa20.49■□□□□ 0.87
SSB-202ENST00000409333 PI16Q6UXB8 463 aa20.49■□□□□ 0.87
SSB-202ENST00000409333 ZNF512BQ96KM6 892 aaPredicted RBP20.49■□□□□ 0.87
SSB-202ENST00000409333 POLLQ9UGP5 575 aa20.49■□□□□ 0.87
SSB-202ENST00000409333 GGA1Q9UJY5 639 aa20.49■□□□□ 0.87
SSB-202ENST00000409333 CD2APQ9Y5K6 639 aa20.49■□□□□ 0.87
SSB-202ENST00000409333 CDC45O75419 566 aa20.49■□□□□ 0.87
SSB-202ENST00000409333 ATP2B4P23634 1241 aa20.49■□□□□ 0.87
SSB-202ENST00000409333 TTLL6Q8N841 843 aa20.49■□□□□ 0.87
SSB-202ENST00000409333 TBC1D16Q8TBP0 767 aa20.49■□□□□ 0.87
SSB-202ENST00000409333 FAM84BQ96KN1 310 aaPredicted RBP20.49■□□□□ 0.87
SSB-202ENST00000409333 SNRKQ9NRH2 765 aa20.49■□□□□ 0.87
SSB-202ENST00000409333 ARFGEF1Q9Y6D6 1849 aa20.48■□□□□ 0.87
SSB-202ENST00000409333 TBC1D9Q6ZT07 1266 aa20.48■□□□□ 0.87
SSB-202ENST00000409333 C7orf43Q8WVR3 580 aa20.48■□□□□ 0.87
SSB-202ENST00000409333 EVI5LQ96CN4 794 aa20.48■□□□□ 0.87
SSB-202ENST00000409333 SNED1Q8TER0 1413 aa20.48■□□□□ 0.87
SSB-202ENST00000409333 UQCRFS1P1P0C7P4 283 aa20.47■□□□□ 0.87
SSB-202ENST00000409333 CAVIN4Q5BKX8 364 aa20.47■□□□□ 0.87
SSB-202ENST00000409333 MPNDQ8N594 471 aa20.47■□□□□ 0.87
SSB-202ENST00000409333 TMX4Q9H1E5 349 aaPredicted RBP20.47■□□□□ 0.87
SSB-202ENST00000409333 COL1A1P02452 1464 aaPredicted RBP20.47■□□□□ 0.87
SSB-202ENST00000409333 FER1L6Q2WGJ9 1857 aa20.47■□□□□ 0.87
SSB-202ENST00000409333 GOLIM4O00461 696 aa20.46■□□□□ 0.87
SSB-202ENST00000409333 FKBP4Q02790 459 aaKnown RBP eCLIP20.46■□□□□ 0.87
SSB-202ENST00000409333 RASGRF1Q13972 1273 aa20.46■□□□□ 0.87
SSB-202ENST00000409333 FBXO33Q7Z6M2 555 aa20.46■□□□□ 0.87
SSB-202ENST00000409333 PAG1Q9NWQ8 432 aa20.46■□□□□ 0.87
SSB-202ENST00000409333 WWC3Q9ULE0 1092 aa20.46■□□□□ 0.87
SSB-202ENST00000409333 IQSEC3Q9UPP2 1182 aaPredicted RBP20.46■□□□□ 0.87
SSB-202ENST00000409333 ZAP70P43403 619 aa20.46■□□□□ 0.87
SSB-202ENST00000409333 DPP8Q6V1X1 898 aaPredicted RBP20.46■□□□□ 0.87
SSB-202ENST00000409333 VPS37DQ86XT2 251 aa20.46■□□□□ 0.87
SSB-202ENST00000409333 ANTXR1Q9H6X2 564 aa20.46■□□□□ 0.87
SSB-202ENST00000409333 CCDC88AQ3V6T2 1871 aa20.46■□□□□ 0.87
SSB-202ENST00000409333 MED23Q9ULK4 1368 aa20.46■□□□□ 0.87
SSB-202ENST00000409333 C6orf229H3BNL8 230 aa20.45■□□□□ 0.86
SSB-202ENST00000409333 C21orf2O43822 256 aa20.45■□□□□ 0.86
SSB-202ENST00000409333 HMG20BQ9P0W2 317 aa20.45■□□□□ 0.86
SSB-202ENST00000409333 PIM2Q9P1W9 311 aa20.45■□□□□ 0.86
SSB-202ENST00000409333 HIBADHP31937 336 aaKnown RBP20.44■□□□□ 0.86
SSB-202ENST00000409333 C15orf52Q6ZUT6 534 aaKnown RBP20.44■□□□□ 0.86
SSB-202ENST00000409333 FSD1Q9BTV5 496 aa20.44■□□□□ 0.86
SSB-202ENST00000409333 SEC24BO95487 1268 aa20.44■□□□□ 0.86
SSB-202ENST00000409333 SPATA5Q8NB90 893 aa20.44■□□□□ 0.86
SSB-202ENST00000409333 NLGN2Q8NFZ4 835 aa20.44■□□□□ 0.86
SSB-202ENST00000409333 CHMLP26374 656 aa20.43■□□□□ 0.86
SSB-202ENST00000409333 GNL3LQ9NVN8 582 aaKnown RBP20.43■□□□□ 0.86
SSB-202ENST00000409333 CYP2E1P05181 493 aaPredicted RBP20.42■□□□□ 0.86
SSB-202ENST00000409333 ZNF646O15015 1829 aaPredicted RBP20.42■□□□□ 0.86
SSB-202ENST00000409333 CC2D2BQ6DHV5 1058 aa20.41■□□□□ 0.86
SSB-202ENST00000409333 ZNF804AQ7Z570 1209 aa20.41■□□□□ 0.86
SSB-202ENST00000409333 KBTBD3Q8NAB2 608 aa20.41■□□□□ 0.86
SSB-202ENST00000409333 SCN9AQ15858 1988 aa20.41■□□□□ 0.86
SSB-202ENST00000409333 RIMBP2O15034 1052 aa20.41■□□□□ 0.86
SSB-202ENST00000409333 DALRD3Q5D0E6 543 aaKnown RBP20.41■□□□□ 0.86
SSB-202ENST00000409333 MAST2Q6P0Q8 1798 aa20.41■□□□□ 0.86
SSB-202ENST00000409333 CHGBP05060 677 aa20.4■□□□□ 0.86
SSB-202ENST00000409333 CCDC93Q567U6 631 aa20.4■□□□□ 0.86
SSB-202ENST00000409333 CASC1Q6TDU7 716 aa20.4■□□□□ 0.86
SSB-202ENST00000409333 SRCAPQ6ZRS2 3230 aa20.4■□□□□ 0.86
SSB-202ENST00000409333 RFX7Q2KHR2 1363 aa20.4■□□□□ 0.86
SSB-202ENST00000409333 PSME4Q14997 1843 aa20.39■□□□□ 0.86
SSB-202ENST00000409333 RTFDC1Q9BY42 306 aaPredicted RBP20.39■□□□□ 0.86
SSB-202ENST00000409333 FHDC1Q9C0D6 1143 aaPredicted RBP20.39■□□□□ 0.86
SSB-202ENST00000409333 PIH1D3Q9NQM4 214 aaKnown RBP20.39■□□□□ 0.86
SSB-202ENST00000409333 DENND2AQ9ULE3 1009 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms