RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 COL14A1Q05707 1796 aaKnown RBP9.99□□□□□ -0.81
SH3D19-202ENST00000409252 RNF113AO15541 343 aaKnown RBP9.99□□□□□ -0.81
SH3D19-202ENST00000409252 SDSP20132 328 aa9.99□□□□□ -0.81
SH3D19-202ENST00000409252 GYG1P46976 350 aa9.99□□□□□ -0.81
SH3D19-202ENST00000409252 SMC5Q8IY18 1101 aa9.99□□□□□ -0.81
SH3D19-202ENST00000409252 SSH3Q8TE77 659 aa9.99□□□□□ -0.81
SH3D19-202ENST00000409252 PDRG1Q9NUG6 133 aa9.99□□□□□ -0.81
SH3D19-202ENST00000409252 TRIM22Q8IYM9 498 aa9.99□□□□□ -0.81
SH3D19-202ENST00000409252 TBC1D22AQ8WUA7 517 aa9.99□□□□□ -0.81
SH3D19-202ENST00000409252 ATP6V1DQ9Y5K8 247 aa9.99□□□□□ -0.81
SH3D19-202ENST00000409252 NFAT5O94916 1531 aa9.98□□□□□ -0.81
SH3D19-202ENST00000409252 IGKV5-2P06315 115 aa9.98□□□□□ -0.81
SH3D19-202ENST00000409252 CASTP20810 708 aaKnown RBP9.98□□□□□ -0.81
SH3D19-202ENST00000409252 PUS3Q9BZE2 481 aaKnown RBP9.98□□□□□ -0.81
SH3D19-202ENST00000409252 ANO8Q9HCE9 1232 aaPredicted RBP9.98□□□□□ -0.81
SH3D19-202ENST00000409252 C21orf2O43822 256 aa9.98□□□□□ -0.81
SH3D19-202ENST00000409252 CAMTA2O94983 1202 aa9.98□□□□□ -0.81
SH3D19-202ENST00000409252 CCDC96Q2M329 555 aa9.98□□□□□ -0.81
SH3D19-202ENST00000409252 SPATA5Q8NB90 893 aa9.98□□□□□ -0.81
SH3D19-202ENST00000409252 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.98□□□□□ -0.81
SH3D19-202ENST00000409252 TSPY2A6NKD2 308 aa9.98□□□□□ -0.81
SH3D19-202ENST00000409252 H7C1W4 665 aa9.98□□□□□ -0.81
SH3D19-202ENST00000409252 MCMDC2Q4G0Z9 681 aa9.98□□□□□ -0.81
SH3D19-202ENST00000409252 EAPPQ56P03 285 aaPredicted RBP9.98□□□□□ -0.81
SH3D19-202ENST00000409252 CC2D2BQ6DHV5 1058 aa9.98□□□□□ -0.81
SH3D19-202ENST00000409252 IPO9Q96P70 1041 aaKnown RBP9.98□□□□□ -0.81
SH3D19-202ENST00000409252 AKAP12Q02952 1782 aa9.98□□□□□ -0.81
SH3D19-202ENST00000409252 BCL9O00512 1426 aa9.98□□□□□ -0.81
SH3D19-202ENST00000409252 MCM2P49736 904 aa9.98□□□□□ -0.81
SH3D19-202ENST00000409252 SLC16A10Q8TF71 515 aa9.98□□□□□ -0.81
SH3D19-202ENST00000409252 FBXO3Q9UK99 471 aa9.98□□□□□ -0.81
SH3D19-202ENST00000409252 LEMD3Q9Y2U8 911 aa9.98□□□□□ -0.81
SH3D19-202ENST00000409252 H7C1D1 291 aa9.97□□□□□ -0.81
SH3D19-202ENST00000409252 MFSD14BQ5SR56 506 aa9.97□□□□□ -0.81
SH3D19-202ENST00000409252 TEX11Q8IYF3 940 aa9.97□□□□□ -0.81
SH3D19-202ENST00000409252 ISCA1Q9BUE6 129 aa9.97□□□□□ -0.81
SH3D19-202ENST00000409252 NMIQ13287 307 aaPredicted RBP9.97□□□□□ -0.81
SH3D19-202ENST00000409252 MFSD6Q6ZSS7 791 aa9.97□□□□□ -0.81
SH3D19-202ENST00000409252 TBC1D9Q6ZT07 1266 aa9.97□□□□□ -0.81
SH3D19-202ENST00000409252 COPRSQ9NQ92 184 aa9.97□□□□□ -0.81
SH3D19-202ENST00000409252 CDK11BP21127 795 aaKnown RBP9.97□□□□□ -0.81
SH3D19-202ENST00000409252 UBE4AQ14139 1066 aa9.97□□□□□ -0.81
SH3D19-202ENST00000409252 RTKN2Q8IZC4 609 aa9.97□□□□□ -0.81
SH3D19-202ENST00000409252 SYNE4Q8N205 404 aa9.97□□□□□ -0.81
SH3D19-202ENST00000409252 TTLL11Q8NHH1 800 aa9.97□□□□□ -0.81
SH3D19-202ENST00000409252 TSHZ2Q9NRE2 1034 aa9.97□□□□□ -0.81
SH3D19-202ENST00000409252 MCM9Q9NXL9 1143 aa9.97□□□□□ -0.81
SH3D19-202ENST00000409252 USP42Q9H9J4 1324 aaKnown RBP9.97□□□□□ -0.81
SH3D19-202ENST00000409252 GNAT2P19087 354 aa9.96□□□□□ -0.81
SH3D19-202ENST00000409252 PIBF1Q8WXW3 757 aa9.96□□□□□ -0.81
SH3D19-202ENST00000409252 ZNF408Q9H9D4 720 aa9.96□□□□□ -0.81
SH3D19-202ENST00000409252 CIAO1O76071 339 aa9.96□□□□□ -0.81
SH3D19-202ENST00000409252 MBD4O95243 580 aa9.96□□□□□ -0.81
SH3D19-202ENST00000409252 PDE8BO95263 885 aa9.96□□□□□ -0.81
SH3D19-202ENST00000409252 BCAMP50895 628 aa9.96□□□□□ -0.81
SH3D19-202ENST00000409252 BRIP1Q9BX63 1249 aa9.96□□□□□ -0.81
SH3D19-202ENST00000409252 AHDC1Q5TGY3 1603 aaPredicted RBP9.96□□□□□ -0.81
SH3D19-202ENST00000409252 DLGAP5Q15398 846 aa9.96□□□□□ -0.82
SH3D19-202ENST00000409252 COL23A1Q86Y22 540 aaPredicted RBP9.96□□□□□ -0.82
SH3D19-202ENST00000409252 TAOK3Q9H2K8 898 aa9.96□□□□□ -0.82
SH3D19-202ENST00000409252 CDHR2Q9BYE9 1310 aa9.96□□□□□ -0.82
SH3D19-202ENST00000409252 IFIT3O14879 490 aaKnown RBP9.96□□□□□ -0.82
SH3D19-202ENST00000409252 INTS5Q6P9B9 1019 aaKnown RBP9.96□□□□□ -0.82
SH3D19-202ENST00000409252 OTUD7AQ8TE49 926 aaPredicted RBP9.96□□□□□ -0.82
SH3D19-202ENST00000409252 DBNDD1Q9H9R9 158 aa9.96□□□□□ -0.82
SH3D19-202ENST00000409252 TTF2Q9UNY4 1162 aaKnown RBP9.96□□□□□ -0.82
SH3D19-202ENST00000409252 ZAP70P43403 619 aa9.95□□□□□ -0.82
SH3D19-202ENST00000409252 TTLL5Q6EMB2 1281 aa9.95□□□□□ -0.82
SH3D19-202ENST00000409252 PLEKHM2Q8IWE5 1019 aa9.95□□□□□ -0.82
SH3D19-202ENST00000409252 ADCY9O60503 1353 aa9.95□□□□□ -0.82
SH3D19-202ENST00000409252 CHRNA5P30532 468 aa9.95□□□□□ -0.82
SH3D19-202ENST00000409252 PLCB2Q00722 1185 aa9.95□□□□□ -0.82
SH3D19-202ENST00000409252 CDKL5O76039 1030 aa9.95□□□□□ -0.82
SH3D19-202ENST00000409252 HMGB1P09429 215 aaKnown RBP9.95□□□□□ -0.82
SH3D19-202ENST00000409252 TSPY3P0CV98 308 aa9.95□□□□□ -0.82
SH3D19-202ENST00000409252 TSPY8P0CW00 308 aa9.95□□□□□ -0.82
SH3D19-202ENST00000409252 CCDC102BQ68D86 513 aa9.95□□□□□ -0.82
SH3D19-202ENST00000409252 PRR5LQ6MZQ0 368 aa9.95□□□□□ -0.82
SH3D19-202ENST00000409252 KIAA0825Q8IV33 1275 aa9.95□□□□□ -0.82
SH3D19-202ENST00000409252 CTCFLQ8NI51 663 aaPredicted RBP9.95□□□□□ -0.82
SH3D19-202ENST00000409252 NDUFB9Q9Y6M9 179 aa9.95□□□□□ -0.82
SH3D19-202ENST00000409252 ANKRD26Q9UPS8 1709 aa9.95□□□□□ -0.82
SH3D19-202ENST00000409252 TNIP1Q15025 636 aa9.95□□□□□ -0.82
SH3D19-202ENST00000409252 CCDC43Q96MW1 224 aaKnown RBP9.95□□□□□ -0.82
SH3D19-202ENST00000409252 BSDC1Q9NW68 430 aaPredicted RBP9.95□□□□□ -0.82
SH3D19-202ENST00000409252 SETD1AO15047 1707 aaKnown RBP9.94□□□□□ -0.82
SH3D19-202ENST00000409252 PLSCR1O15162 318 aa9.94□□□□□ -0.82
SH3D19-202ENST00000409252 UPF3BQ9BZI7 483 aaKnown RBP9.94□□□□□ -0.82
SH3D19-202ENST00000409252 SAP30BPQ9UHR5 308 aaKnown RBP9.94□□□□□ -0.82
SH3D19-202ENST00000409252 PLEKHG2Q9H7P9 1386 aa9.94□□□□□ -0.82
SH3D19-202ENST00000409252 WDR78Q5VTH9 848 aa9.94□□□□□ -0.82
SH3D19-202ENST00000409252 AATFQ9NY61 560 aaKnown RBP eCLIP9.94□□□□□ -0.82
SH3D19-202ENST00000409252 PTMSP20962 102 aa9.94□□□□□ -0.82
SH3D19-202ENST00000409252 NCOA7Q8NI08 942 aa9.94□□□□□ -0.82
SH3D19-202ENST00000409252 TEKT1Q969V4 418 aa9.94□□□□□ -0.82
SH3D19-202ENST00000409252 BACH2Q9BYV9 841 aa9.94□□□□□ -0.82
SH3D19-202ENST00000409252 TOPAZ1Q8N9V7 1692 aa9.94□□□□□ -0.82
SH3D19-202ENST00000409252 MTFR1LQ9H019 292 aa9.94□□□□□ -0.82
SH3D19-202ENST00000409252 SEC63Q9UGP8 760 aaKnown RBP9.94□□□□□ -0.82
SH3D19-202ENST00000409252 STX8Q9UNK0 236 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms