RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 PIK3R4Q99570 1358 aa13.71□□□□□ -0.21
SHANK2-203ENST00000409161 TTC21BQ7Z4L5 1316 aa13.71□□□□□ -0.21
SHANK2-203ENST00000409161 RRAGBQ5VZM2 374 aa13.71□□□□□ -0.21
SHANK2-203ENST00000409161 PPFIA1Q13136 1202 aa13.71□□□□□ -0.22
SHANK2-203ENST00000409161 SEL1L2Q5TEA6 688 aa13.71□□□□□ -0.22
SHANK2-203ENST00000409161 RUFY4Q6ZNE9 571 aa13.71□□□□□ -0.22
SHANK2-203ENST00000409161 TBC1D31Q96DN5 1066 aa13.71□□□□□ -0.22
SHANK2-203ENST00000409161 SAMM50Q9Y512 469 aa13.71□□□□□ -0.22
SHANK2-203ENST00000409161 LDHCP07864 332 aa13.71□□□□□ -0.22
SHANK2-203ENST00000409161 CCT2P78371 535 aaKnown RBP13.71□□□□□ -0.22
SHANK2-203ENST00000409161 INF2Q27J81 1249 aa13.71□□□□□ -0.22
SHANK2-203ENST00000409161 ERO1AQ96HE7 468 aa13.71□□□□□ -0.22
SHANK2-203ENST00000409161 RGS22Q8NE09 1264 aa13.7□□□□□ -0.22
SHANK2-203ENST00000409161 HAUS2Q9NVX0 235 aa13.7□□□□□ -0.22
SHANK2-203ENST00000409161 INPP5BP32019 993 aa13.7□□□□□ -0.22
SHANK2-203ENST00000409161 THEMISQ8N1K5 641 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-203ENST00000409161 RTL9Q8NET4 1388 aa13.7□□□□□ -0.22
SHANK2-203ENST00000409161 TERF1P54274 439 aa13.7□□□□□ -0.22
SHANK2-203ENST00000409161 BRAPQ7Z569 592 aa13.7□□□□□ -0.22
SHANK2-203ENST00000409161 SSH1Q8WYL5 1049 aa13.7□□□□□ -0.22
SHANK2-203ENST00000409161 MAK16Q9BXY0 300 aaKnown RBP13.7□□□□□ -0.22
SHANK2-203ENST00000409161 DBF4Q9UBU7 674 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-203ENST00000409161 IFT20Q8IY31 132 aa13.7□□□□□ -0.22
SHANK2-203ENST00000409161 WHAMMP3Q1A5X7 153 aa13.7□□□□□ -0.22
SHANK2-203ENST00000409161 CFAP70Q5T0N1 1121 aa13.7□□□□□ -0.22
SHANK2-203ENST00000409161 GRIN2BQ13224 1484 aa13.69□□□□□ -0.22
SHANK2-203ENST00000409161 MICU3Q86XE3 530 aa13.69□□□□□ -0.22
SHANK2-203ENST00000409161 CCDC82Q8N4S0 544 aa13.69□□□□□ -0.22
SHANK2-203ENST00000409161 CC2D2AQ9P2K1 1620 aa13.69□□□□□ -0.22
SHANK2-203ENST00000409161 CLNS1AP54105 237 aaKnown RBP13.69□□□□□ -0.22
SHANK2-203ENST00000409161 GUCY1B3Q02153 619 aa13.69□□□□□ -0.22
SHANK2-203ENST00000409161 TYRO3Q06418 890 aa13.69□□□□□ -0.22
SHANK2-203ENST00000409161 ZNF365Q70YC5 407 aa13.69□□□□□ -0.22
SHANK2-203ENST00000409161 PSMD1Q99460 953 aa13.69□□□□□ -0.22
SHANK2-203ENST00000409161 CABP1Q9NZU7 370 aa13.69□□□□□ -0.22
SHANK2-203ENST00000409161 RAD50Q92878 1312 aa13.69□□□□□ -0.22
SHANK2-203ENST00000409161 SRGAP1Q7Z6B7 1085 aa13.69□□□□□ -0.22
SHANK2-203ENST00000409161 MCUR1Q96AQ8 359 aa13.69□□□□□ -0.22
SHANK2-203ENST00000409161 PPP1R9BQ96SB3 815 aa13.69□□□□□ -0.22
SHANK2-203ENST00000409161 POGZQ7Z3K3 1410 aa13.69□□□□□ -0.22
SHANK2-203ENST00000409161 B4DLN1 442 aa13.69□□□□□ -0.22
SHANK2-203ENST00000409161 MRPL12P52815 198 aaKnown RBP13.69□□□□□ -0.22
SHANK2-203ENST00000409161 HDAC1Q13547 482 aaPredicted RBP13.69□□□□□ -0.22
SHANK2-203ENST00000409161 KRBA2Q6ZNG9 492 aa13.69□□□□□ -0.22
SHANK2-203ENST00000409161 UBXN1Q04323 297 aa13.68□□□□□ -0.22
SHANK2-203ENST00000409161 GIMAP6Q6P9H5 292 aa13.68□□□□□ -0.22
SHANK2-203ENST00000409161 UBL4BQ8N7F7 174 aa13.68□□□□□ -0.22
SHANK2-203ENST00000409161 KIFAP3Q92845 792 aa13.68□□□□□ -0.22
SHANK2-203ENST00000409161 WTAPQ15007 396 aa13.68□□□□□ -0.22
SHANK2-203ENST00000409161 SLC12A5Q9H2X9 1139 aa13.68□□□□□ -0.22
SHANK2-203ENST00000409161 LUC7L3O95232 432 aaKnown RBP13.68□□□□□ -0.22
SHANK2-203ENST00000409161 NCBP1Q09161 790 aaKnown RBP13.68□□□□□ -0.22
SHANK2-203ENST00000409161 NUTM2AQ8IVF1 878 aaPredicted RBP13.68□□□□□ -0.22
SHANK2-203ENST00000409161 UBLCP1Q8WVY7 318 aaPredicted RBP13.68□□□□□ -0.22
SHANK2-203ENST00000409161 CCT6BQ92526 530 aa13.68□□□□□ -0.22
SHANK2-203ENST00000409161 CDC5LQ99459 802 aaKnown RBP13.68□□□□□ -0.22
SHANK2-203ENST00000409161 SLC26A6Q9BXS9 759 aa13.68□□□□□ -0.22
SHANK2-203ENST00000409161 CTTNBP2Q8WZ74 1663 aa13.68□□□□□ -0.22
SHANK2-203ENST00000409161 CETN3O15182 167 aa13.68□□□□□ -0.22
SHANK2-203ENST00000409161 PHACTR2O75167 634 aa13.68□□□□□ -0.22
SHANK2-203ENST00000409161 CRNKL1Q9BZJ0 848 aaKnown RBP13.68□□□□□ -0.22
SHANK2-203ENST00000409161 GOLGA6CA6NDK9 693 aa13.68□□□□□ -0.22
SHANK2-203ENST00000409161 GOLGA6DP0CG33 693 aa13.68□□□□□ -0.22
SHANK2-203ENST00000409161 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
SHANK2-203ENST00000409161 GOLGA6AQ9NYA3 693 aa13.68□□□□□ -0.22
SHANK2-203ENST00000409161 NDUFAB1O14561 156 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 KCNK9Q9NPC2 374 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 NPHP3Q7Z494 1330 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 ZBTB43O43298 467 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 FAM169AQ9Y6X4 670 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 ASXL1Q8IXJ9 1541 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 HVCN1Q96D96 273 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 CALM1P0DP23 149 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 CALM2P0DP24 149 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 CALM3P0DP25 149 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.67□□□□□ -0.22
SHANK2-203ENST00000409161 ESR2Q92731 530 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 INTS4Q96HW7 963 aaKnown RBP13.67□□□□□ -0.22
SHANK2-203ENST00000409161 NCAPGQ9BPX3 1015 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 I3L4J1 428 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 EEF2P13639 858 aaKnown RBP13.67□□□□□ -0.22
SHANK2-203ENST00000409161 RPL13P26373 211 aaKnown RBP13.67□□□□□ -0.22
SHANK2-203ENST00000409161 RNF10Q8N5U6 811 aaKnown RBP13.67□□□□□ -0.22
SHANK2-203ENST00000409161 AOPEPQ8N6M6 819 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 TSPY2A6NKD2 308 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 MTMR3Q13615 1198 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 RTN1Q16799 776 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 IQCDQ96DY2 449 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 TSKSQ9UJT2 592 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 CRCPO75575 148 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 NUCB1Q02818 461 aa13.67□□□□□ -0.22
SHANK2-203ENST00000409161 GKAP1Q5VSY0 366 aaPredicted RBP13.67□□□□□ -0.22
SHANK2-203ENST00000409161 TTF2Q9UNY4 1162 aaKnown RBP13.67□□□□□ -0.22
SHANK2-203ENST00000409161 MGEA5O60502 916 aa13.66□□□□□ -0.22
SHANK2-203ENST00000409161 PPP2R3AQ06190 1150 aa13.66□□□□□ -0.22
SHANK2-203ENST00000409161 RILPL1Q5EBL4 403 aa13.66□□□□□ -0.22
SHANK2-203ENST00000409161 CCDC186Q7Z3E2 898 aa13.66□□□□□ -0.22
SHANK2-203ENST00000409161 IMPACTQ9P2X3 320 aa13.66□□□□□ -0.22
SHANK2-203ENST00000409161 PPFIA3O75145 1194 aa13.66□□□□□ -0.22
SHANK2-203ENST00000409161 STK10O94804 968 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms