RNA–Protein interactions for RNA: ENST00000407142.5

PPM1F-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PPM1F, Length 5,587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-203ENST00000407142 ATP8B2P98198 1209 aa17.44■□□□□ 0.38
PPM1F-203ENST00000407142 PARP10Q53GL7 1025 aa17.44■□□□□ 0.38
PPM1F-203ENST00000407142 SPATA24Q86W54 205 aa17.43■□□□□ 0.38
PPM1F-203ENST00000407142 EYA1Q99502 592 aa17.43■□□□□ 0.38
PPM1F-203ENST00000407142 ARFGAP3Q9NP61 516 aa17.43■□□□□ 0.38
PPM1F-203ENST00000407142 FSD2A1L4K1 749 aa17.43■□□□□ 0.38
PPM1F-203ENST00000407142 TBCAO75347 108 aaKnown RBP17.43■□□□□ 0.38
PPM1F-203ENST00000407142 SYCP3Q8IZU3 236 aa17.43■□□□□ 0.38
PPM1F-203ENST00000407142 KANK3Q6NY19 840 aa17.43■□□□□ 0.38
PPM1F-203ENST00000407142 POLR3AO14802 1390 aaPredicted RBP17.43■□□□□ 0.38
PPM1F-203ENST00000407142 BMP15O95972 392 aa17.42■□□□□ 0.38
PPM1F-203ENST00000407142 PRPF4BQ13523 1007 aaKnown RBP17.42■□□□□ 0.38
PPM1F-203ENST00000407142 SLC9C2Q5TAH2 1124 aa17.42■□□□□ 0.38
PPM1F-203ENST00000407142 TCOF1Q13428 1488 aaKnown RBP17.42■□□□□ 0.38
PPM1F-203ENST00000407142 IDEP14735 1019 aa17.42■□□□□ 0.38
PPM1F-203ENST00000407142 RBM26Q5T8P6 1007 aaKnown RBP17.42■□□□□ 0.38
PPM1F-203ENST00000407142 GIMAP6Q6P9H5 292 aa17.42■□□□□ 0.38
PPM1F-203ENST00000407142 ZNF830Q96NB3 372 aaPredicted RBP17.42■□□□□ 0.38
PPM1F-203ENST00000407142 MEIS3Q99687 375 aa17.42■□□□□ 0.38
PPM1F-203ENST00000407142 RSPH14Q9UHP6 348 aa17.42■□□□□ 0.38
PPM1F-203ENST00000407142 CCDC40Q4G0X9 1142 aa17.42■□□□□ 0.38
PPM1F-203ENST00000407142 MCMDC2Q4G0Z9 681 aa17.42■□□□□ 0.38
PPM1F-203ENST00000407142 MRPL50Q8N5N7 158 aaKnown RBP17.42■□□□□ 0.38
PPM1F-203ENST00000407142 FERMT2Q96AC1 680 aa17.42■□□□□ 0.38
PPM1F-203ENST00000407142 ZBTB43O43298 467 aa17.42■□□□□ 0.38
PPM1F-203ENST00000407142 CTNNA2P26232 953 aa17.42■□□□□ 0.38
PPM1F-203ENST00000407142 BBXQ8WY36 941 aaPredicted RBP17.42■□□□□ 0.38
PPM1F-203ENST00000407142 VTI1AQ96AJ9 217 aa17.42■□□□□ 0.38
PPM1F-203ENST00000407142 CCDC97Q96F63 343 aaPredicted RBP17.42■□□□□ 0.38
PPM1F-203ENST00000407142 ATP2C2O75185 946 aa17.41■□□□□ 0.38
PPM1F-203ENST00000407142 NOP2P46087 812 aaKnown RBP17.41■□□□□ 0.38
PPM1F-203ENST00000407142 LDHBP07195 334 aaKnown RBP17.41■□□□□ 0.38
PPM1F-203ENST00000407142 CCDC102BQ68D86 513 aa17.41■□□□□ 0.38
PPM1F-203ENST00000407142 CTAGE15A4D2H0 777 aa17.41■□□□□ 0.38
PPM1F-203ENST00000407142 CTAGE8P0CG41 777 aa17.41■□□□□ 0.38
PPM1F-203ENST00000407142 XRCC6P12956 609 aaKnown RBP eCLIP17.41■□□□□ 0.38
PPM1F-203ENST00000407142 CTAGE6Q86UF2 777 aa17.41■□□□□ 0.38
PPM1F-203ENST00000407142 CTAGE4Q8IX94 777 aa17.41■□□□□ 0.38
PPM1F-203ENST00000407142 KLF18A0A0U1RQI7 1052 aa17.41■□□□□ 0.38
PPM1F-203ENST00000407142 RIMBP2O15034 1052 aa17.41■□□□□ 0.38
PPM1F-203ENST00000407142 SMARCC2Q8TAQ2 1214 aa17.41■□□□□ 0.38
PPM1F-203ENST00000407142 SKILP12757 684 aa17.4■□□□□ 0.38
PPM1F-203ENST00000407142 CALM1P0DP23 149 aa17.4■□□□□ 0.38
PPM1F-203ENST00000407142 CALM2P0DP24 149 aa17.4■□□□□ 0.38
PPM1F-203ENST00000407142 CALM3P0DP25 149 aa17.4■□□□□ 0.38
PPM1F-203ENST00000407142 RTN1Q16799 776 aa17.4■□□□□ 0.38
PPM1F-203ENST00000407142 ISM2Q6H9L7 571 aa17.4■□□□□ 0.38
PPM1F-203ENST00000407142 C8orf58Q8NAV2 365 aa17.4■□□□□ 0.38
PPM1F-203ENST00000407142 BICD1Q96G01 975 aa17.4■□□□□ 0.38
PPM1F-203ENST00000407142 PAG1Q9NWQ8 432 aa17.4■□□□□ 0.38
PPM1F-203ENST00000407142 ZSCAN22P10073 491 aaPredicted RBP17.4■□□□□ 0.38
PPM1F-203ENST00000407142 ANKRD44Q8N8A2 993 aa17.4■□□□□ 0.38
PPM1F-203ENST00000407142 FBF1Q8TES7 1133 aa17.4■□□□□ 0.38
PPM1F-203ENST00000407142 MAP3K19Q56UN5 1328 aa17.39■□□□□ 0.37
PPM1F-203ENST00000407142 RTL9Q8NET4 1388 aa17.39■□□□□ 0.37
PPM1F-203ENST00000407142 UBASH3AP57075 661 aa17.39■□□□□ 0.37
PPM1F-203ENST00000407142 TRMT1LQ7Z2T5 733 aaKnown RBP17.39■□□□□ 0.37
PPM1F-203ENST00000407142 NSRP1Q9H0G5 558 aaKnown RBP17.39■□□□□ 0.37
PPM1F-203ENST00000407142 ZSCAN16Q9H4T2 348 aaPredicted RBP17.39■□□□□ 0.37
PPM1F-203ENST00000407142 HOMER2Q9NSB8 354 aa17.39■□□□□ 0.37
PPM1F-203ENST00000407142 DNAI1Q9UI46 699 aa17.39■□□□□ 0.37
PPM1F-203ENST00000407142 HDAC1Q13547 482 aaPredicted RBP17.39■□□□□ 0.37
PPM1F-203ENST00000407142 IFI16Q16666 785 aaKnown RBP17.39■□□□□ 0.37
PPM1F-203ENST00000407142 CCDC155Q8N6L0 562 aa17.39■□□□□ 0.37
PPM1F-203ENST00000407142 GTPBP4Q9BZE4 634 aaKnown RBP17.39■□□□□ 0.37
PPM1F-203ENST00000407142 ZKSCAN5Q9Y2L8 839 aa17.39■□□□□ 0.37
PPM1F-203ENST00000407142 A0A1W2PP64 1363 aa17.39■□□□□ 0.37
PPM1F-203ENST00000407142 CCDC174Q6PII3 467 aa17.39■□□□□ 0.37
PPM1F-203ENST00000407142 CCDC186Q7Z3E2 898 aa17.39■□□□□ 0.37
PPM1F-203ENST00000407142 USP37Q86T82 979 aa17.39■□□□□ 0.37
PPM1F-203ENST00000407142 ATP7AQ04656 1500 aa17.38■□□□□ 0.37
PPM1F-203ENST00000407142 N4BP3O15049 544 aa17.38■□□□□ 0.37
PPM1F-203ENST00000407142 ANO6Q4KMQ2 910 aa17.38■□□□□ 0.37
PPM1F-203ENST00000407142 SH2D4AQ9H788 454 aa17.38■□□□□ 0.37
PPM1F-203ENST00000407142 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.38■□□□□ 0.37
PPM1F-203ENST00000407142 SBNO1A3KN83 1393 aa17.38■□□□□ 0.37
PPM1F-203ENST00000407142 KIF21AQ7Z4S6 1674 aa17.38■□□□□ 0.37
PPM1F-203ENST00000407142 TCERG1LQ5VWI1 586 aa17.38■□□□□ 0.37
PPM1F-203ENST00000407142 PANK2Q9BZ23 570 aa17.38■□□□□ 0.37
PPM1F-203ENST00000407142 USP21Q9UK80 565 aa17.38■□□□□ 0.37
PPM1F-203ENST00000407142 HEATR3Q7Z4Q2 680 aa17.38■□□□□ 0.37
PPM1F-203ENST00000407142 DENND2AQ9ULE3 1009 aa17.38■□□□□ 0.37
PPM1F-203ENST00000407142 FAM200AQ8TCP9 573 aa17.37■□□□□ 0.37
PPM1F-203ENST00000407142 SRRTQ9BXP5 876 aaKnown RBP17.37■□□□□ 0.37
PPM1F-203ENST00000407142 RNF216Q9NWF9 866 aaPredicted RBP17.37■□□□□ 0.37
PPM1F-203ENST00000407142 TTC41PQ6P2S7 1318 aa17.37■□□□□ 0.37
PPM1F-203ENST00000407142 MCM6Q14566 821 aa17.37■□□□□ 0.37
PPM1F-203ENST00000407142 PLS1Q14651 629 aa17.37■□□□□ 0.37
PPM1F-203ENST00000407142 TSHZ3Q63HK5 1081 aa17.37■□□□□ 0.37
PPM1F-203ENST00000407142 BABAM1Q9NWV8 329 aa17.37■□□□□ 0.37
PPM1F-203ENST00000407142 OPA1O60313 960 aa17.37■□□□□ 0.37
PPM1F-203ENST00000407142 SLU7O95391 586 aaKnown RBP17.37■□□□□ 0.37
PPM1F-203ENST00000407142 BAG6P46379 1132 aa17.37■□□□□ 0.37
PPM1F-203ENST00000407142 RNF113AO15541 343 aaKnown RBP17.37■□□□□ 0.37
PPM1F-203ENST00000407142 TUBB4AP04350 444 aa17.37■□□□□ 0.37
PPM1F-203ENST00000407142 TMX3Q96JJ7 454 aa17.37■□□□□ 0.37
PPM1F-203ENST00000407142 MCM9Q9NXL9 1143 aa17.37■□□□□ 0.37
PPM1F-203ENST00000407142 SLAIN2Q9P270 581 aa17.37■□□□□ 0.37
PPM1F-203ENST00000407142 PTPRKQ15262 1439 aa17.37■□□□□ 0.37
PPM1F-203ENST00000407142 NAPAP54920 295 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms