RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 FAM53CQ9NYF3 392 aa19.07■□□□□ 0.64
LSP1-204ENST00000406638 GOLGA6L4A6NEF3 574 aa19.06■□□□□ 0.64
LSP1-204ENST00000406638 CYP19A1P11511 503 aaPredicted RBP19.06■□□□□ 0.64
LSP1-204ENST00000406638 KRT85P78386 507 aa19.06■□□□□ 0.64
LSP1-204ENST00000406638 HLFQ16534 295 aa19.06■□□□□ 0.64
LSP1-204ENST00000406638 SMIM5Q71RC9 77 aa19.06■□□□□ 0.64
LSP1-204ENST00000406638 LRRC8AQ8IWT6 810 aa19.06■□□□□ 0.64
LSP1-204ENST00000406638 KLHL34Q8N239 644 aa19.06■□□□□ 0.64
LSP1-204ENST00000406638 LSG1Q9H089 658 aaKnown RBP19.06■□□□□ 0.64
LSP1-204ENST00000406638 THRAP3Q9Y2W1 955 aaKnown RBP19.06■□□□□ 0.64
LSP1-204ENST00000406638 DOT1LQ8TEK3 1739 aa19.06■□□□□ 0.64
LSP1-204ENST00000406638 MTX1Q13505 466 aa19.06■□□□□ 0.64
LSP1-204ENST00000406638 LARP1BQ659C4 914 aaKnown RBP19.05■□□□□ 0.64
LSP1-204ENST00000406638 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.05■□□□□ 0.64
LSP1-204ENST00000406638 GTF3C6Q969F1 213 aa19.05■□□□□ 0.64
LSP1-204ENST00000406638 USP21Q9UK80 565 aa19.05■□□□□ 0.64
LSP1-204ENST00000406638 WNK3Q9BYP7 1800 aa19.05■□□□□ 0.64
LSP1-204ENST00000406638 ARFGEF2Q9Y6D5 1785 aa19.05■□□□□ 0.64
LSP1-204ENST00000406638 EP400Q96L91 3159 aa19.05■□□□□ 0.64
LSP1-204ENST00000406638 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.05■□□□□ 0.64
LSP1-204ENST00000406638 CASP7P55210 303 aa19.05■□□□□ 0.64
LSP1-204ENST00000406638 ADCK5Q3MIX3 580 aa19.05■□□□□ 0.64
LSP1-204ENST00000406638 CDC37L1Q7L3B6 337 aa19.05■□□□□ 0.64
LSP1-204ENST00000406638 TULP2O00295 520 aa19.04■□□□□ 0.64
LSP1-204ENST00000406638 SKILP12757 684 aa19.04■□□□□ 0.64
LSP1-204ENST00000406638 BARGINQ6ZT62 677 aa19.04■□□□□ 0.64
LSP1-204ENST00000406638 TDRD7Q8NHU6 1098 aaKnown RBP19.04■□□□□ 0.64
LSP1-204ENST00000406638 NOL10Q9BSC4 688 aaKnown RBP19.04■□□□□ 0.64
LSP1-204ENST00000406638 TBC1D2BQ9UPU7 963 aa19.04■□□□□ 0.64
LSP1-204ENST00000406638 SASH1O94885 1247 aa19.04■□□□□ 0.64
LSP1-204ENST00000406638 PDIA4P13667 645 aaKnown RBP19.04■□□□□ 0.64
LSP1-204ENST00000406638 GPTP24298 496 aa19.04■□□□□ 0.64
LSP1-204ENST00000406638 HNRNPH2P55795 449 aaKnown RBP19.04■□□□□ 0.64
LSP1-204ENST00000406638 ST3GAL1Q11201 340 aa19.04■□□□□ 0.64
LSP1-204ENST00000406638 JAKMIP1Q96N16 626 aaKnown RBP19.04■□□□□ 0.64
LSP1-204ENST00000406638 CCDC85AQ96PX6 553 aaPredicted RBP19.04■□□□□ 0.64
LSP1-204ENST00000406638 PDRG1Q9NUG6 133 aa19.04■□□□□ 0.64
LSP1-204ENST00000406638 ERO1AQ96HE7 468 aa19.04■□□□□ 0.64
LSP1-204ENST00000406638 TRIM34Q9BYJ4 488 aa19.04■□□□□ 0.64
LSP1-204ENST00000406638 ITPK1Q13572 414 aa19.03■□□□□ 0.64
LSP1-204ENST00000406638 ME3Q16798 604 aa19.03■□□□□ 0.64
LSP1-204ENST00000406638 NYAP1Q6ZVC0 841 aa19.03■□□□□ 0.64
LSP1-204ENST00000406638 NR1I2O75469 434 aa19.03■□□□□ 0.64
LSP1-204ENST00000406638 STARD3NLO95772 234 aa19.03■□□□□ 0.64
LSP1-204ENST00000406638 VPS72Q15906 364 aa19.03■□□□□ 0.64
LSP1-204ENST00000406638 FILIP1Q7Z7B0 1213 aa19.03■□□□□ 0.64
LSP1-204ENST00000406638 CDCA7Q9BWT1 371 aaPredicted RBP19.03■□□□□ 0.64
LSP1-204ENST00000406638 TLR7Q9NYK1 1049 aaKnown RBP19.03■□□□□ 0.64
LSP1-204ENST00000406638 CCDC171Q6TFL3 1326 aa19.02■□□□□ 0.64
LSP1-204ENST00000406638 TUBGCP6Q96RT7 1819 aa19.02■□□□□ 0.64
LSP1-204ENST00000406638 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.02■□□□□ 0.63
LSP1-204ENST00000406638 LMBR1LQ6UX01 489 aa19.02■□□□□ 0.63
LSP1-204ENST00000406638 FNBP4Q8N3X1 1017 aaPredicted RBP19.02■□□□□ 0.63
LSP1-204ENST00000406638 KIF1BPQ96EK5 621 aa19.02■□□□□ 0.63
LSP1-204ENST00000406638 SPATA32Q96LK8 384 aa19.02■□□□□ 0.63
LSP1-204ENST00000406638 EPB41L2O43491 1005 aaKnown RBP19.01■□□□□ 0.63
LSP1-204ENST00000406638 SLU7O95391 586 aaKnown RBP19.01■□□□□ 0.63
LSP1-204ENST00000406638 ATP6V1AP38606 617 aa19.01■□□□□ 0.63
LSP1-204ENST00000406638 ERCC6LQ2NKX8 1250 aa19.01■□□□□ 0.63
LSP1-204ENST00000406638 CYP2C19P33261 490 aa19.01■□□□□ 0.63
LSP1-204ENST00000406638 MEX3CQ5U5Q3 659 aaKnown RBP19.01■□□□□ 0.63
LSP1-204ENST00000406638 PRPF40BQ6NWY9 871 aaKnown RBP19.01■□□□□ 0.63
LSP1-204ENST00000406638 FAM89AQ96GI7 184 aa19.01■□□□□ 0.63
LSP1-204ENST00000406638 CCDC8Q9H0W5 538 aaPredicted RBP19.01■□□□□ 0.63
LSP1-204ENST00000406638 CWC25Q9NXE8 425 aaPredicted RBP19.01■□□□□ 0.63
LSP1-204ENST00000406638 AFDNP55196 1824 aaKnown RBP19■□□□□ 0.63
LSP1-204ENST00000406638 RAB11FIP3O75154 756 aa19■□□□□ 0.63
LSP1-204ENST00000406638 RFX5P48382 616 aaPredicted RBP19■□□□□ 0.63
LSP1-204ENST00000406638 FOXO4P98177 505 aa19■□□□□ 0.63
LSP1-204ENST00000406638 SLC20A2Q08357 652 aa19■□□□□ 0.63
LSP1-204ENST00000406638 CLSTN2Q9H4D0 955 aa19■□□□□ 0.63
LSP1-204ENST00000406638 H7C1W4 665 aa19■□□□□ 0.63
LSP1-204ENST00000406638 PTH1RQ03431 593 aa19■□□□□ 0.63
LSP1-204ENST00000406638 PI4K2BQ8TCG2 481 aa19■□□□□ 0.63
LSP1-204ENST00000406638 LOC102724428A0A0B4J2F2 783 aa18.99■□□□□ 0.63
LSP1-204ENST00000406638 SIK1P57059 783 aa18.99■□□□□ 0.63
LSP1-204ENST00000406638 BMS1Q14692 1282 aaKnown RBP18.99■□□□□ 0.63
LSP1-204ENST00000406638 LRRN4CLQ8ND94 238 aa18.99■□□□□ 0.63
LSP1-204ENST00000406638 EAF2Q96CJ1 260 aaPredicted RBP18.99■□□□□ 0.63
LSP1-204ENST00000406638 ZNF594Q96JF6 807 aaPredicted RBP18.99■□□□□ 0.63
LSP1-204ENST00000406638 CCDC69A6NI79 296 aa18.99■□□□□ 0.63
LSP1-204ENST00000406638 GOLGA6L19H0YKK7 550 aa18.99■□□□□ 0.63
LSP1-204ENST00000406638 BICD2Q8TD16 824 aa18.99■□□□□ 0.63
LSP1-204ENST00000406638 DDX19AQ9NUU7 478 aaKnown RBP18.99■□□□□ 0.63
LSP1-204ENST00000406638 CYP46A1Q9Y6A2 500 aa18.99■□□□□ 0.63
LSP1-204ENST00000406638 NWD2Q9ULI1 1742 aa18.98■□□□□ 0.63
LSP1-204ENST00000406638 PTPN12Q05209 780 aaKnown RBP18.98■□□□□ 0.63
LSP1-204ENST00000406638 TCIRG1Q13488 830 aa18.98■□□□□ 0.63
LSP1-204ENST00000406638 COL9A3Q14050 684 aaPredicted RBP18.98■□□□□ 0.63
LSP1-204ENST00000406638 VPS53Q5VIR6 699 aa18.98■□□□□ 0.63
LSP1-204ENST00000406638 AACSQ86V21 672 aa18.98■□□□□ 0.63
LSP1-204ENST00000406638 TPCN1Q9ULQ1 816 aa18.98■□□□□ 0.63
LSP1-204ENST00000406638 ELP1O95163 1332 aa18.98■□□□□ 0.63
LSP1-204ENST00000406638 NUP188Q5SRE5 1749 aa18.98■□□□□ 0.63
LSP1-204ENST00000406638 A0A087WWV3 80 aa18.98■□□□□ 0.63
LSP1-204ENST00000406638 SLFNL1Q499Z3 407 aa18.98■□□□□ 0.63
LSP1-204ENST00000406638 INTS5Q6P9B9 1019 aaKnown RBP18.98■□□□□ 0.63
LSP1-204ENST00000406638 ZSCAN31Q96LW9 406 aaPredicted RBP18.98■□□□□ 0.63
LSP1-204ENST00000406638 SH2B1Q9NRF2 756 aaPredicted RBP18.98■□□□□ 0.63
LSP1-204ENST00000406638 FHOD1Q9Y613 1164 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms