RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 IMPACTQ9P2X3 320 aa16.11■□□□□ 0.17
DUSP28-202ENST00000405954 UHRF1BP1LA0JNW5 1464 aa16.11■□□□□ 0.17
DUSP28-202ENST00000405954 IFT172Q9UG01 1749 aa16.11■□□□□ 0.17
DUSP28-202ENST00000405954 HSPA4P34932 840 aa16.11■□□□□ 0.17
DUSP28-202ENST00000405954 CPLX3Q8WVH0 158 aa16.11■□□□□ 0.17
DUSP28-202ENST00000405954 ATG3Q9NT62 314 aa16.11■□□□□ 0.17
DUSP28-202ENST00000405954 FAM169AQ9Y6X4 670 aa16.11■□□□□ 0.17
DUSP28-202ENST00000405954 CFAP74Q9C0B2 1584 aa16.11■□□□□ 0.17
DUSP28-202ENST00000405954 KIAA1210Q9ULL0 1709 aa16.11■□□□□ 0.17
DUSP28-202ENST00000405954 CABS1Q96KC9 395 aa16.11■□□□□ 0.17
DUSP28-202ENST00000405954 GNL3LQ9NVN8 582 aaKnown RBP16.11■□□□□ 0.17
DUSP28-202ENST00000405954 PHLPP2Q6ZVD8 1323 aa16.11■□□□□ 0.17
DUSP28-202ENST00000405954 CBFA2T2O43439 604 aa16.1■□□□□ 0.17
DUSP28-202ENST00000405954 ZEB2O60315 1214 aa16.1■□□□□ 0.17
DUSP28-202ENST00000405954 ATP2C2O75185 946 aa16.1■□□□□ 0.17
DUSP28-202ENST00000405954 EZRP15311 586 aaKnown RBP16.1■□□□□ 0.17
DUSP28-202ENST00000405954 STK38Q15208 465 aa16.1■□□□□ 0.17
DUSP28-202ENST00000405954 UNC5CLQ8IV45 518 aa16.1■□□□□ 0.17
DUSP28-202ENST00000405954 DHX58Q96C10 678 aa16.1■□□□□ 0.17
DUSP28-202ENST00000405954 TRIM6Q9C030 488 aaPredicted RBP16.1■□□□□ 0.17
DUSP28-202ENST00000405954 PSMA5P28066 241 aa16.1■□□□□ 0.17
DUSP28-202ENST00000405954 CAGE1Q8TC20 777 aa16.1■□□□□ 0.17
DUSP28-202ENST00000405954 TTC41PQ6P2S7 1318 aa16.1■□□□□ 0.17
DUSP28-202ENST00000405954 SIGLEC1Q9BZZ2 1709 aa16.1■□□□□ 0.17
DUSP28-202ENST00000405954 PPLO60437 1756 aa16.1■□□□□ 0.17
DUSP28-202ENST00000405954 NDUFAB1O14561 156 aa16.1■□□□□ 0.17
DUSP28-202ENST00000405954 RNF40O75150 1001 aa16.1■□□□□ 0.17
DUSP28-202ENST00000405954 RPSAP08865 295 aaKnown RBP16.1■□□□□ 0.17
DUSP28-202ENST00000405954 LRRC31Q6UY01 552 aa16.1■□□□□ 0.17
DUSP28-202ENST00000405954 FOXO3O43524 673 aa16.09■□□□□ 0.17
DUSP28-202ENST00000405954 ABCA9Q8IUA7 1624 aa16.09■□□□□ 0.17
DUSP28-202ENST00000405954 CEP120Q8N960 986 aa16.09■□□□□ 0.17
DUSP28-202ENST00000405954 FAM76AQ8TAV0 307 aa16.09■□□□□ 0.17
DUSP28-202ENST00000405954 FAM71BQ8TC56 605 aa16.09■□□□□ 0.17
DUSP28-202ENST00000405954 DESI2Q9BSY9 194 aa16.09■□□□□ 0.17
DUSP28-202ENST00000405954 ZSCAN16Q9H4T2 348 aaPredicted RBP16.09■□□□□ 0.17
DUSP28-202ENST00000405954 ABCB6Q9NP58 842 aa16.09■□□□□ 0.17
DUSP28-202ENST00000405954 NRXN1Q9ULB1 1477 aa16.09■□□□□ 0.17
DUSP28-202ENST00000405954 CTAGE15A4D2H0 777 aa16.09■□□□□ 0.17
DUSP28-202ENST00000405954 CTAGE8P0CG41 777 aa16.09■□□□□ 0.17
DUSP28-202ENST00000405954 ME3Q16798 604 aa16.09■□□□□ 0.17
DUSP28-202ENST00000405954 CTAGE6Q86UF2 777 aa16.09■□□□□ 0.17
DUSP28-202ENST00000405954 ANKRD18AQ8IVF6 992 aa16.09■□□□□ 0.17
DUSP28-202ENST00000405954 CTAGE4Q8IX94 777 aa16.09■□□□□ 0.17
DUSP28-202ENST00000405954 AKAP2Q9Y2D5 859 aa16.09■□□□□ 0.17
DUSP28-202ENST00000405954 YEATS2Q9ULM3 1422 aa16.09■□□□□ 0.17
DUSP28-202ENST00000405954 ELF1P32519 619 aa16.09■□□□□ 0.17
DUSP28-202ENST00000405954 OLFM4Q6UX06 510 aa16.09■□□□□ 0.17
DUSP28-202ENST00000405954 GOLGA6L9A6NEM1 432 aa16.08■□□□□ 0.16
DUSP28-202ENST00000405954 PPARDQ03181 441 aa16.08■□□□□ 0.16
DUSP28-202ENST00000405954 NFE2L2Q16236 605 aa16.08■□□□□ 0.16
DUSP28-202ENST00000405954 BRF1Q92994 677 aa16.08■□□□□ 0.16
DUSP28-202ENST00000405954 LRRC7Q96NW7 1537 aa16.08■□□□□ 0.16
DUSP28-202ENST00000405954 TCHHQ07283 1943 aa16.08■□□□□ 0.16
DUSP28-202ENST00000405954 ACTN3Q08043 901 aaPredicted RBP16.08■□□□□ 0.16
DUSP28-202ENST00000405954 CASP8Q14790 479 aa16.08■□□□□ 0.16
DUSP28-202ENST00000405954 E2F5Q15329 346 aa16.08■□□□□ 0.16
DUSP28-202ENST00000405954 SULT6B1Q6IMI4 303 aa16.08■□□□□ 0.16
DUSP28-202ENST00000405954 ARMCX5Q6P1M9 558 aa16.08■□□□□ 0.16
DUSP28-202ENST00000405954 SARM1Q6SZW1 724 aa16.08■□□□□ 0.16
DUSP28-202ENST00000405954 MYO5BQ9ULV0 1848 aa16.08■□□□□ 0.16
DUSP28-202ENST00000405954 SLC3A2P08195 630 aaKnown RBP16.07■□□□□ 0.16
DUSP28-202ENST00000405954 GNAI3P08754 354 aa16.07■□□□□ 0.16
DUSP28-202ENST00000405954 PAX7P23759 505 aa16.07■□□□□ 0.16
DUSP28-202ENST00000405954 CEP85LQ5SZL2 805 aa16.07■□□□□ 0.16
DUSP28-202ENST00000405954 SWT1Q5T5J6 900 aaKnown RBP16.07■□□□□ 0.16
DUSP28-202ENST00000405954 CEP112Q8N8E3 955 aa16.07■□□□□ 0.16
DUSP28-202ENST00000405954 SGSM3Q96HU1 749 aa16.07■□□□□ 0.16
DUSP28-202ENST00000405954 IRAK4Q9NWZ3 460 aa16.07■□□□□ 0.16
DUSP28-202ENST00000405954 PPP2R2CQ9Y2T4 447 aa16.07■□□□□ 0.16
DUSP28-202ENST00000405954 ARID4AP29374 1257 aaPredicted RBP16.07■□□□□ 0.16
DUSP28-202ENST00000405954 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.07■□□□□ 0.16
DUSP28-202ENST00000405954 ABCC4O15439 1325 aa16.07■□□□□ 0.16
DUSP28-202ENST00000405954 ZC3H13Q5T200 1668 aaKnown RBP16.07■□□□□ 0.16
DUSP28-202ENST00000405954 CEBPAP49715 358 aaPredicted RBP16.07■□□□□ 0.16
DUSP28-202ENST00000405954 PLEKHO1Q53GL0 409 aaPredicted RBP16.07■□□□□ 0.16
DUSP28-202ENST00000405954 ZNF569Q5MCW4 686 aa16.07■□□□□ 0.16
DUSP28-202ENST00000405954 NUTM2GQ5VZR2 741 aa16.07■□□□□ 0.16
DUSP28-202ENST00000405954 ZNF396Q96N95 335 aaPredicted RBP16.07■□□□□ 0.16
DUSP28-202ENST00000405954 DNAJC5Q9H3Z4 198 aa16.07■□□□□ 0.16
DUSP28-202ENST00000405954 FRMPD1Q5SYB0 1578 aa16.07■□□□□ 0.16
DUSP28-202ENST00000405954 ARHGEF28Q8N1W1 1705 aaKnown RBP16.07■□□□□ 0.16
DUSP28-202ENST00000405954 FANCCQ00597 558 aa16.06■□□□□ 0.16
DUSP28-202ENST00000405954 IQCB1Q15051 598 aa16.06■□□□□ 0.16
DUSP28-202ENST00000405954 MAP9Q49MG5 647 aa16.06■□□□□ 0.16
DUSP28-202ENST00000405954 KIRREL3Q8IZU9 778 aa16.06■□□□□ 0.16
DUSP28-202ENST00000405954 BAG1Q99933 345 aaPredicted RBP16.06■□□□□ 0.16
DUSP28-202ENST00000405954 RTL1A6NKG5 1358 aa16.06■□□□□ 0.16
DUSP28-202ENST00000405954 A0A1B0GVL5 298 aa16.06■□□□□ 0.16
DUSP28-202ENST00000405954 FCHSD2O94868 740 aa16.06■□□□□ 0.16
DUSP28-202ENST00000405954 CCDC70Q6NSX1 233 aa16.06■□□□□ 0.16
DUSP28-202ENST00000405954 GOLGA6CA6NDK9 693 aa16.06■□□□□ 0.16
DUSP28-202ENST00000405954 GOLGA6DP0CG33 693 aa16.06■□□□□ 0.16
DUSP28-202ENST00000405954 CCDC148Q8NFR7 591 aa16.06■□□□□ 0.16
DUSP28-202ENST00000405954 WDR24Q96S15 920 aa16.06■□□□□ 0.16
DUSP28-202ENST00000405954 SPATS2LQ9NUQ6 558 aaKnown RBP16.06■□□□□ 0.16
DUSP28-202ENST00000405954 GOLGA6AQ9NYA3 693 aa16.06■□□□□ 0.16
DUSP28-202ENST00000405954 NAP1L1P55209 391 aaKnown RBP16.05■□□□□ 0.16
DUSP28-202ENST00000405954 TRDNQ13061 729 aa16.05■□□□□ 0.16
DUSP28-202ENST00000405954 CD248Q9HCU0 757 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms