RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 CLN3Q13286 438 aa9.6□□□□□ -0.87
CEACAM1-208ENST00000403461 SCARF1Q14162 830 aa9.6□□□□□ -0.87
CEACAM1-208ENST00000403461 NBPF1Q3BBV0 1214 aa9.6□□□□□ -0.87
CEACAM1-208ENST00000403461 MARCH10Q8NA82 808 aaPredicted RBP9.6□□□□□ -0.87
CEACAM1-208ENST00000403461 XAGE2Q96GT9 111 aa9.6□□□□□ -0.87
CEACAM1-208ENST00000403461 ZFP42Q96MM3 310 aa9.6□□□□□ -0.87
CEACAM1-208ENST00000403461 CARD10Q9BWT7 1032 aa9.6□□□□□ -0.87
CEACAM1-208ENST00000403461 MTFR1LQ9H019 292 aa9.6□□□□□ -0.87
CEACAM1-208ENST00000403461 ZNF395Q9H8N7 513 aaPredicted RBP9.6□□□□□ -0.87
CEACAM1-208ENST00000403461 NOVA2Q9UNW9 492 aaKnown RBP9.6□□□□□ -0.87
CEACAM1-208ENST00000403461 LMO7Q8WWI1 1683 aa9.6□□□□□ -0.87
CEACAM1-208ENST00000403461 RREB1Q92766 1687 aa9.6□□□□□ -0.87
CEACAM1-208ENST00000403461 STAU1O95793 577 aaKnown RBP9.59□□□□□ -0.87
CEACAM1-208ENST00000403461 DPYDQ12882 1025 aa9.59□□□□□ -0.87
CEACAM1-208ENST00000403461 SLC15A2Q16348 729 aa9.59□□□□□ -0.87
CEACAM1-208ENST00000403461 TXNRD1Q16881 649 aa9.59□□□□□ -0.87
CEACAM1-208ENST00000403461 FAM200AQ8TCP9 573 aa9.59□□□□□ -0.87
CEACAM1-208ENST00000403461 IRF7Q92985 503 aa9.59□□□□□ -0.87
CEACAM1-208ENST00000403461 ARXQ96QS3 562 aa9.59□□□□□ -0.87
CEACAM1-208ENST00000403461 ESYT1Q9BSJ8 1104 aa9.59□□□□□ -0.87
CEACAM1-208ENST00000403461 RAB6BQ9NRW1 208 aa9.59□□□□□ -0.87
CEACAM1-208ENST00000403461 CCDC7Q96M83 1385 aa9.59□□□□□ -0.87
CEACAM1-208ENST00000403461 NUP188Q5SRE5 1749 aa9.59□□□□□ -0.87
CEACAM1-208ENST00000403461 TTC21AQ8NDW8 1320 aa9.58□□□□□ -0.88
CEACAM1-208ENST00000403461 TOPAZ1Q8N9V7 1692 aa9.58□□□□□ -0.88
CEACAM1-208ENST00000403461 SLIT3O75094 1523 aa9.58□□□□□ -0.88
CEACAM1-208ENST00000403461 IL2RAP01589 272 aa9.58□□□□□ -0.88
CEACAM1-208ENST00000403461 BMP2P12643 396 aa9.58□□□□□ -0.88
CEACAM1-208ENST00000403461 GMPRP36959 345 aa9.58□□□□□ -0.88
CEACAM1-208ENST00000403461 SEC13P55735 322 aa9.58□□□□□ -0.88
CEACAM1-208ENST00000403461 C6orf118Q5T5N4 469 aa9.58□□□□□ -0.88
CEACAM1-208ENST00000403461 ARHGEF25Q86VW2 580 aa9.58□□□□□ -0.88
CEACAM1-208ENST00000403461 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.58□□□□□ -0.88
CEACAM1-208ENST00000403461 CNKSR1Q969H4 720 aa9.58□□□□□ -0.88
CEACAM1-208ENST00000403461 TTC21BQ7Z4L5 1316 aa9.57□□□□□ -0.88
CEACAM1-208ENST00000403461 PARP4Q9UKK3 1724 aaKnown RBP9.57□□□□□ -0.88
CEACAM1-208ENST00000403461 FAM181BA6NEQ2 426 aa9.57□□□□□ -0.88
CEACAM1-208ENST00000403461 M0R2N6 131 aa9.57□□□□□ -0.88
CEACAM1-208ENST00000403461 MEN1O00255 615 aa9.57□□□□□ -0.88
CEACAM1-208ENST00000403461 BACH1O14867 736 aa9.57□□□□□ -0.88
CEACAM1-208ENST00000403461 NLRP3Q96P20 1036 aa9.57□□□□□ -0.88
CEACAM1-208ENST00000403461 SLC4A9Q96Q91 983 aa9.57□□□□□ -0.88
CEACAM1-208ENST00000403461 PURBQ96QR8 312 aaKnown RBP9.57□□□□□ -0.88
CEACAM1-208ENST00000403461 FHDC1Q9C0D6 1143 aaPredicted RBP9.57□□□□□ -0.88
CEACAM1-208ENST00000403461 ZNF358Q9NW07 568 aa9.57□□□□□ -0.88
CEACAM1-208ENST00000403461 ZMIZ1Q9ULJ6 1067 aa9.57□□□□□ -0.88
CEACAM1-208ENST00000403461 HRH3Q9Y5N1 445 aa9.57□□□□□ -0.88
CEACAM1-208ENST00000403461 SFI1A8K8P3 1242 aa9.56□□□□□ -0.88
CEACAM1-208ENST00000403461 PTF1AQ7RTS3 328 aa9.56□□□□□ -0.88
CEACAM1-208ENST00000403461 NPAS3Q8IXF0 933 aa9.56□□□□□ -0.88
CEACAM1-208ENST00000403461 INSM2Q96T92 566 aaPredicted RBP9.56□□□□□ -0.88
CEACAM1-208ENST00000403461 SYT17Q9BSW7 474 aa9.56□□□□□ -0.88
CEACAM1-208ENST00000403461 SENP3-EIF4A1A0A087X0R7 540 aa9.55□□□□□ -0.88
CEACAM1-208ENST00000403461 GPC1P35052 558 aa9.55□□□□□ -0.88
CEACAM1-208ENST00000403461 STK32AQ8WU08 396 aa9.55□□□□□ -0.88
CEACAM1-208ENST00000403461 PDGFDQ9GZP0 370 aaPredicted RBP9.55□□□□□ -0.88
CEACAM1-208ENST00000403461 NLRP2Q9NX02 1062 aa9.55□□□□□ -0.88
CEACAM1-208ENST00000403461 SERTAD1Q9UHV2 236 aa9.55□□□□□ -0.88
CEACAM1-208ENST00000403461 LRRC37A3O60309 1634 aa9.55□□□□□ -0.88
CEACAM1-208ENST00000403461 TNS2Q63HR2 1409 aa9.55□□□□□ -0.88
CEACAM1-208ENST00000403461 ROCK2O75116 1388 aaKnown RBP9.54□□□□□ -0.88
CEACAM1-208ENST00000403461 H3BM21 787 aa9.54□□□□□ -0.88
CEACAM1-208ENST00000403461 IL2RBP14784 551 aa9.54□□□□□ -0.88
CEACAM1-208ENST00000403461 POLD1P28340 1107 aa9.54□□□□□ -0.88
CEACAM1-208ENST00000403461 RNF144AP50876 292 aaPredicted RBP9.54□□□□□ -0.88
CEACAM1-208ENST00000403461 SMTNP53814 917 aa9.54□□□□□ -0.88
CEACAM1-208ENST00000403461 CENPCQ03188 943 aa9.54□□□□□ -0.88
CEACAM1-208ENST00000403461 GPR162Q16538 588 aa9.54□□□□□ -0.88
CEACAM1-208ENST00000403461 POLMQ9NP87 494 aaPredicted RBP9.54□□□□□ -0.88
CEACAM1-208ENST00000403461 RGPD3A6NKT7 1758 aaPredicted RBP9.54□□□□□ -0.88
CEACAM1-208ENST00000403461 RGPD4Q7Z3J3 1758 aa9.54□□□□□ -0.88
CEACAM1-208ENST00000403461 KIAA1210Q9ULL0 1709 aa9.53□□□□□ -0.88
CEACAM1-208ENST00000403461 KTN1Q86UP2 1357 aaKnown RBP9.53□□□□□ -0.88
CEACAM1-208ENST00000403461 CTSOP43234 321 aaPredicted RBP9.53□□□□□ -0.88
CEACAM1-208ENST00000403461 TMEM164Q5U3C3 297 aa9.53□□□□□ -0.88
CEACAM1-208ENST00000403461 ZSCAN1Q8NBB4 408 aa9.53□□□□□ -0.88
CEACAM1-208ENST00000403461 ACSBG1Q96GR2 724 aa9.53□□□□□ -0.88
CEACAM1-208ENST00000403461 PEAK1Q9H792 1746 aa9.53□□□□□ -0.88
CEACAM1-208ENST00000403461 MAP3K5Q99683 1374 aa9.52□□□□□ -0.88
CEACAM1-208ENST00000403461 A6NJY4 79 aa9.52□□□□□ -0.89
CEACAM1-208ENST00000403461 TTLL8A6PVC2 850 aa9.52□□□□□ -0.89
CEACAM1-208ENST00000403461 C1QTNF8P60827 252 aa9.52□□□□□ -0.89
CEACAM1-208ENST00000403461 MTFR1Q15390 333 aa9.52□□□□□ -0.89
CEACAM1-208ENST00000403461 TLR1Q15399 786 aa9.52□□□□□ -0.89
CEACAM1-208ENST00000403461 HDGFL2Q7Z4V5 671 aaPredicted RBP9.52□□□□□ -0.89
CEACAM1-208ENST00000403461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.52□□□□□ -0.893e-8■■□□□ 12.2
CEACAM1-208ENST00000403461 TSEN2Q8NCE0 465 aaKnown RBP9.52□□□□□ -0.89
CEACAM1-208ENST00000403461 ABCC6O95255 1503 aa9.51□□□□□ -0.89
CEACAM1-208ENST00000403461 EPHA4P54764 986 aa9.51□□□□□ -0.89
CEACAM1-208ENST00000403461 PDE4CQ08493 712 aa9.51□□□□□ -0.89
CEACAM1-208ENST00000403461 SWI5Q1ZZU3 235 aa9.51□□□□□ -0.89
CEACAM1-208ENST00000403461 SLC27A3Q5K4L6 730 aa9.51□□□□□ -0.89
CEACAM1-208ENST00000403461 FOXD4L5Q5VV16 416 aaPredicted RBP9.51□□□□□ -0.89
CEACAM1-208ENST00000403461 RETREG2Q8NC44 543 aa9.51□□□□□ -0.89
CEACAM1-208ENST00000403461 ANKRD24Q8TF21 1146 aa9.51□□□□□ -0.89
CEACAM1-208ENST00000403461 L3MBTL2Q969R5 705 aa9.51□□□□□ -0.89
CEACAM1-208ENST00000403461 GRIP2Q9C0E4 1043 aa9.51□□□□□ -0.89
CEACAM1-208ENST00000403461 USTQ9Y2C2 406 aa9.51□□□□□ -0.89
CEACAM1-208ENST00000403461 ERBB4Q15303 1308 aa9.51□□□□□ -0.89
CEACAM1-208ENST00000403461 SOBPA7XYQ1 873 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms