RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 AKAP11Q9UKA4 1901 aa15.82■□□□□ 0.12
PRAME-204ENST00000403441 RASAL3Q86YV0 1011 aa15.82■□□□□ 0.12
PRAME-204ENST00000403441 OGFOD1Q8N543 542 aa15.82■□□□□ 0.12
PRAME-204ENST00000403441 SPEF2Q9C093 1822 aa15.82■□□□□ 0.12
PRAME-204ENST00000403441 IGKV5-2P06315 115 aa15.81■□□□□ 0.12
PRAME-204ENST00000403441 TSPYL6Q8N831 410 aa15.81■□□□□ 0.12
PRAME-204ENST00000403441 TTLL11Q8NHH1 800 aa15.81■□□□□ 0.12
PRAME-204ENST00000403441 MYO3BQ8WXR4 1341 aa15.81■□□□□ 0.12
PRAME-204ENST00000403441 FBXW7Q969H0 707 aa15.81■□□□□ 0.12
PRAME-204ENST00000403441 CSRNP1Q96S65 589 aa15.81■□□□□ 0.12
PRAME-204ENST00000403441 GREM2Q9H772 168 aa15.81■□□□□ 0.12
PRAME-204ENST00000403441 MINPP1Q9UNW1 487 aa15.81■□□□□ 0.12
PRAME-204ENST00000403441 IGHMBP2P38935 993 aaKnown RBP15.8■□□□□ 0.12
PRAME-204ENST00000403441 CCT4P50991 539 aaKnown RBP15.8■□□□□ 0.12
PRAME-204ENST00000403441 TSR2Q969E8 191 aaKnown RBP15.8■□□□□ 0.12
PRAME-204ENST00000403441 COA1Q9GZY4 146 aa15.8■□□□□ 0.12
PRAME-204ENST00000403441 NEURL1BA8MQ27 555 aa15.79■□□□□ 0.12
PRAME-204ENST00000403441 NF2P35240 595 aa15.79■□□□□ 0.12
PRAME-204ENST00000403441 CWF19L2Q2TBE0 894 aaKnown RBP15.79■□□□□ 0.12
PRAME-204ENST00000403441 STRIP1Q5VSL9 837 aa15.79■□□□□ 0.12
PRAME-204ENST00000403441 UBE3BQ7Z3V4 1068 aa15.79■□□□□ 0.12
PRAME-204ENST00000403441 SLC34A2O95436 690 aa15.78■□□□□ 0.12
PRAME-204ENST00000403441 MMP14P50281 582 aa15.78■□□□□ 0.12
PRAME-204ENST00000403441 TTLL12Q14166 644 aaPredicted RBP15.78■□□□□ 0.12
PRAME-204ENST00000403441 TWISTNBQ3B726 338 aaPredicted RBP15.78■□□□□ 0.12
PRAME-204ENST00000403441 DACT2Q5SW24 774 aa15.78■□□□□ 0.12
PRAME-204ENST00000403441 LEMD3Q9Y2U8 911 aa15.78■□□□□ 0.12
PRAME-204ENST00000403441 WTIPA6NIX2 430 aaPredicted RBP15.77■□□□□ 0.12
PRAME-204ENST00000403441 NBPF9Q3BBW0 867 aa15.77■□□□□ 0.12
PRAME-204ENST00000403441 CTU1Q7Z7A3 348 aaKnown RBP15.77■□□□□ 0.12
PRAME-204ENST00000403441 MPHOSPH8Q99549 860 aa15.77■□□□□ 0.12
PRAME-204ENST00000403441 ANKRD2Q9GZV1 360 aa15.77■□□□□ 0.12
PRAME-204ENST00000403441 MYH16Q9H6N6 1097 aa15.77■□□□□ 0.12
PRAME-204ENST00000403441 SCAF8Q9UPN6 1271 aaKnown RBP15.77■□□□□ 0.12
PRAME-204ENST00000403441 ZNF804BA4D1E1 1349 aa15.76■□□□□ 0.11
PRAME-204ENST00000403441 IL16Q14005 1332 aa15.76■□□□□ 0.11
PRAME-204ENST00000403441 UBE2Q2LH0YL09 131 aa15.76■□□□□ 0.11
PRAME-204ENST00000403441 H7C1W4 665 aa15.76■□□□□ 0.11
PRAME-204ENST00000403441 SLC4A2P04920 1241 aa15.76■□□□□ 0.11
PRAME-204ENST00000403441 KCNJ4P48050 445 aa15.76■□□□□ 0.11
PRAME-204ENST00000403441 MOB2Q70IA6 237 aa15.76■□□□□ 0.11
PRAME-204ENST00000403441 WWC1Q8IX03 1113 aa15.76■□□□□ 0.11
PRAME-204ENST00000403441 MXD3Q9BW11 206 aa15.76■□□□□ 0.11
PRAME-204ENST00000403441 WNT10BO00744 389 aa15.75■□□□□ 0.11
PRAME-204ENST00000403441 SASH1O94885 1247 aa15.75■□□□□ 0.11
PRAME-204ENST00000403441 ITGA6P23229 1130 aa15.75■□□□□ 0.11
PRAME-204ENST00000403441 GCKRQ14397 625 aa15.75■□□□□ 0.11
PRAME-204ENST00000403441 PRAMEF18Q5VWM3 479 aa15.75■□□□□ 0.11
PRAME-204ENST00000403441 APOBEC3FQ8IUX4 373 aaKnown RBP15.75■□□□□ 0.11
PRAME-204ENST00000403441 HDAC9Q9UKV0 1011 aa15.75■□□□□ 0.11
PRAME-204ENST00000403441 ZNF646O15015 1829 aaPredicted RBP15.75■□□□□ 0.11
PRAME-204ENST00000403441 SOX10P56693 466 aa15.74■□□□□ 0.11
PRAME-204ENST00000403441 FLIIQ13045 1269 aa15.74■□□□□ 0.11
PRAME-204ENST00000403441 FKBP5Q13451 457 aaPredicted RBP15.74■□□□□ 0.11
PRAME-204ENST00000403441 TTLL5Q6EMB2 1281 aa15.74■□□□□ 0.11
PRAME-204ENST00000403441 G2E3Q7L622 706 aa15.74■□□□□ 0.11
PRAME-204ENST00000403441 TXNRD3Q86VQ6 643 aa15.74■□□□□ 0.11
PRAME-204ENST00000403441 PLA2G12BQ9BX93 195 aa15.74■□□□□ 0.11
PRAME-204ENST00000403441 PDE4DIPQ5VU43 2346 aa15.73■□□□□ 0.11
PRAME-204ENST00000403441 CACNA1FO60840 1977 aa15.73■□□□□ 0.11
PRAME-204ENST00000403441 CCER2I3L3R5 266 aa15.73■□□□□ 0.11
PRAME-204ENST00000403441 SREBF2Q12772 1141 aa15.73■□□□□ 0.11
PRAME-204ENST00000403441 PKN2Q16513 984 aaKnown RBP15.73■□□□□ 0.11
PRAME-204ENST00000403441 ARMC9Q7Z3E5 817 aa15.73■□□□□ 0.11
PRAME-204ENST00000403441 KIAA0825Q8IV33 1275 aa15.73■□□□□ 0.11
PRAME-204ENST00000403441 LINS1Q8NG48 757 aa15.73■□□□□ 0.11
PRAME-204ENST00000403441 DNAAF4Q8WXU2 420 aa15.73■□□□□ 0.11
PRAME-204ENST00000403441 KLRK1P26718 216 aa15.72■□□□□ 0.11
PRAME-204ENST00000403441 GTF2IP78347 998 aa15.72■□□□□ 0.11
PRAME-204ENST00000403441 COL1A1P02452 1464 aaPredicted RBP15.71■□□□□ 0.11
PRAME-204ENST00000403441 ZNF521Q96K83 1311 aa15.71■□□□□ 0.11
PRAME-204ENST00000403441 ANKRD18BA2A2Z9 1011 aa15.71■□□□□ 0.11
PRAME-204ENST00000403441 TBC1D8O95759 1140 aa15.71■□□□□ 0.11
PRAME-204ENST00000403441 CSF1RP07333 972 aa15.71■□□□□ 0.11
PRAME-204ENST00000403441 CHRNDQ07001 517 aa15.71■□□□□ 0.11
PRAME-204ENST00000403441 ZNF296Q8WUU4 475 aaPredicted RBP15.71■□□□□ 0.11
PRAME-204ENST00000403441 TNRC18O15417 2968 aaPredicted RBP15.71■□□□□ 0.11
PRAME-204ENST00000403441 FANCIQ9NVI1 1328 aa15.7■□□□□ 0.1
PRAME-204ENST00000403441 TM4SF4P48230 202 aa15.7■□□□□ 0.1
PRAME-204ENST00000403441 CASP7P55210 303 aa15.7■□□□□ 0.1
PRAME-204ENST00000403441 MKRN3Q13064 507 aaKnown RBP15.7■□□□□ 0.1
PRAME-204ENST00000403441 DLGAP5Q15398 846 aa15.7■□□□□ 0.1
PRAME-204ENST00000403441 WDR63Q8IWG1 891 aa15.7■□□□□ 0.1
PRAME-204ENST00000403441 FAM9BQ8IZU0 186 aa15.7■□□□□ 0.1
PRAME-204ENST00000403441 HPS5Q9UPZ3 1129 aa15.7■□□□□ 0.1
PRAME-204ENST00000403441 IFIT5Q13325 482 aaKnown RBP15.69■□□□□ 0.1
PRAME-204ENST00000403441 PRKG1Q13976 671 aa15.69■□□□□ 0.1
PRAME-204ENST00000403441 NOM1Q5C9Z4 860 aaKnown RBP15.69■□□□□ 0.1
PRAME-204ENST00000403441 ZNF804AQ7Z570 1209 aa15.69■□□□□ 0.1
PRAME-204ENST00000403441 CD209Q9NNX6 404 aa15.69■□□□□ 0.1
PRAME-204ENST00000403441 MYO1BO43795 1136 aa15.68■□□□□ 0.1
PRAME-204ENST00000403441 PTPN12Q05209 780 aaKnown RBP15.68■□□□□ 0.1
PRAME-204ENST00000403441 ZBED3Q96IU2 234 aaPredicted RBP15.68■□□□□ 0.1
PRAME-204ENST00000403441 DEFB129Q9H1M3 183 aa15.68■□□□□ 0.1
PRAME-204ENST00000403441 ANGEL1Q9UNK9 670 aaKnown RBP15.68■□□□□ 0.1
PRAME-204ENST00000403441 CHMP3Q9Y3E7 222 aa15.68■□□□□ 0.1
PRAME-204ENST00000403441 PPP2R3BQ9Y5P8 575 aa15.68■□□□□ 0.1
PRAME-204ENST00000403441 GPR25O00155 361 aa15.67■□□□□ 0.1
PRAME-204ENST00000403441 C15orf52Q6ZUT6 534 aaKnown RBP15.67■□□□□ 0.1
PRAME-204ENST00000403441 TAF5LO75529 589 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms