RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 COL13A1Q5TAT6 717 aaPredicted RBP4.04□□□□□ -1.76
CBX3P9-201ENST00000402326 HFE2Q6ZVN8 426 aa4.04□□□□□ -1.76
CBX3P9-201ENST00000402326 FBXO33Q7Z6M2 555 aa4.04□□□□□ -1.76
CBX3P9-201ENST00000402326 FAM35AQ86V20 835 aa4.04□□□□□ -1.76
CBX3P9-201ENST00000402326 GALNT12Q8IXK2 581 aa4.04□□□□□ -1.76
CBX3P9-201ENST00000402326 FBF1Q8TES7 1133 aa4.04□□□□□ -1.76
CBX3P9-201ENST00000402326 EDARADDQ8WWZ3 215 aa4.04□□□□□ -1.76
CBX3P9-201ENST00000402326 CCDC74AQ96AQ1 378 aa4.04□□□□□ -1.76
CBX3P9-201ENST00000402326 MDFIQ99750 246 aa4.04□□□□□ -1.76
CBX3P9-201ENST00000402326 WWC3Q9ULE0 1092 aa4.04□□□□□ -1.76
CBX3P9-201ENST00000402326 SLC6A14Q9UN76 642 aa4.04□□□□□ -1.76
CBX3P9-201ENST00000402326 PRPF40AO75400 957 aaKnown RBP4.03□□□□□ -1.76
CBX3P9-201ENST00000402326 CELA2BP08218 269 aaPredicted RBP4.03□□□□□ -1.76
CBX3P9-201ENST00000402326 CPB1P15086 417 aa4.03□□□□□ -1.76
CBX3P9-201ENST00000402326 EIF2AK2P19525 551 aaKnown RBP4.03□□□□□ -1.76
CBX3P9-201ENST00000402326 MAP3K10Q02779 954 aa4.03□□□□□ -1.76
CBX3P9-201ENST00000402326 ELMSAN1Q6PJG2 1045 aa4.03□□□□□ -1.76
CBX3P9-201ENST00000402326 LYPD4Q6UWN0 246 aa4.03□□□□□ -1.76
CBX3P9-201ENST00000402326 C1orf229Q6ZS94 237 aaPredicted RBP4.03□□□□□ -1.76
CBX3P9-201ENST00000402326 MICALL1Q8N3F8 863 aa4.03□□□□□ -1.76
CBX3P9-201ENST00000402326 CEP120Q8N960 986 aa4.03□□□□□ -1.76
CBX3P9-201ENST00000402326 BCL11AQ9H165 835 aa4.03□□□□□ -1.76
CBX3P9-201ENST00000402326 ENAMQ9NRM1 1142 aa4.03□□□□□ -1.76
CBX3P9-201ENST00000402326 NLRP2Q9NX02 1062 aa4.03□□□□□ -1.76
CBX3P9-201ENST00000402326 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.03□□□□□ -1.76
CBX3P9-201ENST00000402326 GADD45BO75293 160 aaPredicted RBP4.02□□□□□ -1.77
CBX3P9-201ENST00000402326 AMPD1P23109 780 aa4.02□□□□□ -1.77
CBX3P9-201ENST00000402326 XPCQ01831 940 aaPredicted RBP4.02□□□□□ -1.77
CBX3P9-201ENST00000402326 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.02□□□□□ -1.77
CBX3P9-201ENST00000402326 PERM1Q5SV97 790 aa4.02□□□□□ -1.77
CBX3P9-201ENST00000402326 KIAA0319Q5VV43 1072 aa4.02□□□□□ -1.77
CBX3P9-201ENST00000402326 PEAR1Q5VY43 1037 aaPredicted RBP4.02□□□□□ -1.77
CBX3P9-201ENST00000402326 EPS8L3Q8TE67 593 aaKnown RBP4.02□□□□□ -1.77
CBX3P9-201ENST00000402326 BTBD6Q96KE9 485 aa4.02□□□□□ -1.77
CBX3P9-201ENST00000402326 FRMD6Q96NE9 622 aa4.02□□□□□ -1.77
CBX3P9-201ENST00000402326 SETDB2Q96T68 719 aa4.02□□□□□ -1.77
CBX3P9-201ENST00000402326 OSMRQ99650 979 aa4.02□□□□□ -1.77
CBX3P9-201ENST00000402326 DUSP9Q99956 384 aaKnown RBP4.02□□□□□ -1.77
CBX3P9-201ENST00000402326 PBX4Q9BYU1 374 aa4.02□□□□□ -1.77
CBX3P9-201ENST00000402326 NPHS2Q9NP85 383 aa4.02□□□□□ -1.77
CBX3P9-201ENST00000402326 PPP4R2Q9NY27 417 aa4.02□□□□□ -1.77
CBX3P9-201ENST00000402326 FRRS1LQ9P0K9 344 aa4.02□□□□□ -1.77
CBX3P9-201ENST00000402326 SPG7Q9UQ90 795 aa4.02□□□□□ -1.77
CBX3P9-201ENST00000402326 A0A1W2PP55 124 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 SHISA8B8ZZ34 492 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 GIPC1O14908 333 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 RGS9O75916 674 aaPredicted RBP4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 SMNDC1O75940 238 aaKnown RBP eCLIP4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 ITGAEP38570 1179 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 ZNF385CQ66K41 422 aaPredicted RBP4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 PSAPL1Q6NUJ1 521 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 CHSY3Q70JA7 882 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 NEDD1Q8NHV4 660 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 WHAMMQ8TF30 809 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 TTC9Q92623 222 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 PLD4Q96BZ4 506 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 LPIN3Q9BQK8 851 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 ZKSCAN3Q9BRR0 538 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 SMG9Q9H0W8 520 aaKnown RBP4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 EHD4Q9H223 541 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 RASSF4Q9H2L5 321 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 LATS2Q9NRM7 1088 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 RNF19AQ9NV58 838 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 DZANK1Q9NVP4 752 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 PARP2Q9UGN5 583 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 NAGPAQ9UK23 515 aa4.01□□□□□ -1.77
CBX3P9-201ENST00000402326 M0R082 166 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 NFKBIEO00221 500 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 PDE2AO00408 941 aaPredicted RBP4□□□□□ -1.77
CBX3P9-201ENST00000402326 LILRB5O75023 590 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 TRPA1O75762 1119 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 ACPPP15309 386 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 GNA15P30679 374 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 DAB2P98082 770 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 ATP11AP98196 1134 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 PSMD2Q13200 908 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 CEP135Q66GS9 1140 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 PI16Q6UXB8 463 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 C20orf204Q6ZNR8 217 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 CACTIN-AS1Q8N1I8 211 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 TMEM102Q8N9M5 508 aaPredicted RBP4□□□□□ -1.77
CBX3P9-201ENST00000402326 ZNF417Q8TAU3 575 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 NUDT8Q8WV74 236 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 ZNF587Q96SQ5 575 aaPredicted RBP4□□□□□ -1.77
CBX3P9-201ENST00000402326 BCO2Q9BYV7 579 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 SRCIN1Q9C0H9 1055 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 SUV39H2Q9H5I1 410 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 LIN7BQ9HAP6 207 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 MRS2Q9HD23 443 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 JPH1Q9HDC5 661 aaPredicted RBP4□□□□□ -1.77
CBX3P9-201ENST00000402326 IGSF5Q9NSI5 407 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 TRAK1Q9UPV9 953 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 STARD13Q9Y3M8 1113 aa4□□□□□ -1.77
CBX3P9-201ENST00000402326 FAM177BA6PVY3 158 aa3.99□□□□□ -1.77
CBX3P9-201ENST00000402326 ARHGEF15O94989 841 aa3.99□□□□□ -1.77
CBX3P9-201ENST00000402326 ALBP02768 609 aa3.99□□□□□ -1.77
CBX3P9-201ENST00000402326 GRM2Q14416 872 aa3.99□□□□□ -1.77
CBX3P9-201ENST00000402326 NXPE4Q6UWF7 544 aa3.99□□□□□ -1.77
CBX3P9-201ENST00000402326 TMC4Q7Z404 712 aa3.99□□□□□ -1.77
CBX3P9-201ENST00000402326 CCNJLQ8IV13 435 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 290.3 ms