RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 ADORA1P30542 326 aa9.01□□□□□ -0.97
HDAC9-201ENST00000401921 RFX5P48382 616 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-201ENST00000401921 HMGN5P82970 282 aaKnown RBP9.01□□□□□ -0.97
HDAC9-201ENST00000401921 PPP4R3BQ5MIZ7 849 aa9.01□□□□□ -0.97
HDAC9-201ENST00000401921 FILIP1Q7Z7B0 1213 aa9.01□□□□□ -0.97
HDAC9-201ENST00000401921 CCDC144CPQ8IYA2 1237 aa9.01□□□□□ -0.97
HDAC9-201ENST00000401921 XAGE2Q96GT9 111 aa9.01□□□□□ -0.97
HDAC9-201ENST00000401921 TBC1D2BQ9UPU7 963 aa9.01□□□□□ -0.97
HDAC9-201ENST00000401921 A0A0G2JLW4 131 aa9.01□□□□□ -0.97
HDAC9-201ENST00000401921 KLF18A0A0U1RQI7 1052 aa9.01□□□□□ -0.97
HDAC9-201ENST00000401921 GOLGA8BA8MQT2 603 aa9.01□□□□□ -0.97
HDAC9-201ENST00000401921 E7EWF7 191 aa9.01□□□□□ -0.97
HDAC9-201ENST00000401921 PI16Q6UXB8 463 aa9.01□□□□□ -0.97
HDAC9-201ENST00000401921 CCDC186Q7Z3E2 898 aa9.01□□□□□ -0.97
HDAC9-201ENST00000401921 SYNE4Q8N205 404 aa9.01□□□□□ -0.97
HDAC9-201ENST00000401921 FSIP1Q8NA03 581 aa9.01□□□□□ -0.97
HDAC9-201ENST00000401921 ZSCAN16Q9H4T2 348 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-201ENST00000401921 GPHNQ9NQX3 736 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-201ENST00000401921 A0A087WWV3 80 aa9□□□□□ -0.97
HDAC9-201ENST00000401921 RXRAP19793 462 aa9□□□□□ -0.97
HDAC9-201ENST00000401921 PTGS1P23219 599 aa9□□□□□ -0.97
HDAC9-201ENST00000401921 ZAP70P43403 619 aa9□□□□□ -0.97
HDAC9-201ENST00000401921 TSC1Q92574 1164 aa9□□□□□ -0.97
HDAC9-201ENST00000401921 C8orf76Q96K31 380 aa9□□□□□ -0.97
HDAC9-201ENST00000401921 HELLSQ9NRZ9 838 aa9□□□□□ -0.97
HDAC9-201ENST00000401921 ORC3Q9UBD5 711 aaPredicted RBP9□□□□□ -0.97
HDAC9-201ENST00000401921 ASAP1Q9ULH1 1129 aa9□□□□□ -0.97
HDAC9-201ENST00000401921 KDM6AO15550 1401 aaPredicted RBP9□□□□□ -0.97
HDAC9-201ENST00000401921 NFAT5O94916 1531 aa9□□□□□ -0.97
HDAC9-201ENST00000401921 H7C1W4 665 aa9□□□□□ -0.97
HDAC9-201ENST00000401921 ATP2B1P20020 1258 aa9□□□□□ -0.97
HDAC9-201ENST00000401921 ATP2B3Q16720 1220 aa9□□□□□ -0.97
HDAC9-201ENST00000401921 CCDC82Q8N4S0 544 aa9□□□□□ -0.97
HDAC9-201ENST00000401921 DDX24Q9GZR7 859 aaKnown RBP eCLIP9□□□□□ -0.97
HDAC9-201ENST00000401921 EIF2AK3Q9NZJ5 1116 aaKnown RBP9□□□□□ -0.97
HDAC9-201ENST00000401921 FOXO4P98177 505 aa9□□□□□ -0.97
HDAC9-201ENST00000401921 ISM2Q6H9L7 571 aa9□□□□□ -0.97
HDAC9-201ENST00000401921 CPLX2Q6PUV4 134 aaKnown RBP9□□□□□ -0.97
HDAC9-201ENST00000401921 CBX8Q9HC52 389 aa9□□□□□ -0.97
HDAC9-201ENST00000401921 MEGF6O75095 1541 aa9□□□□□ -0.97
HDAC9-201ENST00000401921 HEG1Q9ULI3 1381 aa9□□□□□ -0.97
HDAC9-201ENST00000401921 BIN1O00499 593 aa8.99□□□□□ -0.97
HDAC9-201ENST00000401921 PRC1O43663 620 aa8.99□□□□□ -0.97
HDAC9-201ENST00000401921 DHX16O60231 1041 aaKnown RBP8.99□□□□□ -0.97
HDAC9-201ENST00000401921 DMTNQ08495 405 aa8.99□□□□□ -0.97
HDAC9-201ENST00000401921 RABL6Q3YEC7 729 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-201ENST00000401921 SLC9C2Q5TAH2 1124 aa8.99□□□□□ -0.97
HDAC9-201ENST00000401921 STOX1Q6ZVD7 989 aa8.99□□□□□ -0.97
HDAC9-201ENST00000401921 CHMP4CQ96CF2 233 aa8.99□□□□□ -0.97
HDAC9-201ENST00000401921 ZNF609O15014 1411 aa8.99□□□□□ -0.97
HDAC9-201ENST00000401921 TCIRG1Q13488 830 aa8.99□□□□□ -0.97
HDAC9-201ENST00000401921 UTP14CQ5TAP6 766 aaKnown RBP8.99□□□□□ -0.97
HDAC9-201ENST00000401921 ATG9AQ7Z3C6 839 aa8.99□□□□□ -0.97
HDAC9-201ENST00000401921 OSBP2Q969R2 916 aa8.99□□□□□ -0.97
HDAC9-201ENST00000401921 CLIP2Q9UDT6 1046 aa8.99□□□□□ -0.97
HDAC9-201ENST00000401921 MAST3O60307 1309 aa8.99□□□□□ -0.97
HDAC9-201ENST00000401921 SPATA31A3Q5VYP0 1347 aa8.99□□□□□ -0.97
HDAC9-201ENST00000401921 ANKRD18BA2A2Z9 1011 aa8.99□□□□□ -0.97
HDAC9-201ENST00000401921 TRIM29Q14134 588 aa8.99□□□□□ -0.97
HDAC9-201ENST00000401921 USP28Q96RU2 1077 aa8.99□□□□□ -0.97
HDAC9-201ENST00000401921 MPHOSPH8Q99549 860 aa8.99□□□□□ -0.97
HDAC9-201ENST00000401921 MED23Q9ULK4 1368 aa8.99□□□□□ -0.97
HDAC9-201ENST00000401921 A0A1B0GVL5 298 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 ERVV-2B6SEH9 535 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 M0R2C6 588 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 TPM3P06753 285 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 TPD52L1Q16890 204 aaPredicted RBP8.98□□□□□ -0.97
HDAC9-201ENST00000401921 ZMYM1Q5SVZ6 1142 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 MICU3Q86XE3 530 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 NCOA7Q8NI08 942 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 KCNB2Q92953 911 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 AIDAQ96BJ3 306 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 PGBD1Q96JS3 809 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 C16orf45Q96MC5 204 aaPredicted RBP8.98□□□□□ -0.97
HDAC9-201ENST00000401921 MRVI1Q9Y6F6 885 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 FGAP02671 866 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 ITGA6P23229 1130 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 NSUN7Q8NE18 718 aaKnown RBP8.98□□□□□ -0.97
HDAC9-201ENST00000401921 PIBF1Q8WXW3 757 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 IL17RAQ96F46 866 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 DSCC1Q9BVC3 393 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 CLSTN2Q9H4D0 955 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 BTG4Q9NY30 223 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 SLAIN2Q9P270 581 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 WDR17Q8IZU2 1322 aa8.98□□□□□ -0.97
HDAC9-201ENST00000401921 NPHP1O15259 732 aa8.97□□□□□ -0.97
HDAC9-201ENST00000401921 GPAA1O43292 621 aa8.97□□□□□ -0.97
HDAC9-201ENST00000401921 PFKFB2O60825 505 aa8.97□□□□□ -0.97
HDAC9-201ENST00000401921 BRINP3Q76B58 766 aa8.97□□□□□ -0.97
HDAC9-201ENST00000401921 GJB4Q9NTQ9 266 aa8.97□□□□□ -0.97
HDAC9-201ENST00000401921 IQSEC3Q9UPP2 1182 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-201ENST00000401921 IRS4O14654 1257 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-201ENST00000401921 SMC2O95347 1197 aa8.97□□□□□ -0.97
HDAC9-201ENST00000401921 MARCKSP29966 332 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-201ENST00000401921 PDIA3P30101 505 aaKnown RBP8.97□□□□□ -0.97
HDAC9-201ENST00000401921 LRMPQ12912 555 aa8.97□□□□□ -0.97
HDAC9-201ENST00000401921 NRBP1Q9UHY1 535 aa8.97□□□□□ -0.97
HDAC9-201ENST00000401921 RESTQ13127 1097 aa8.97□□□□□ -0.97
HDAC9-201ENST00000401921 PYCARDQ9ULZ3 195 aa8.97□□□□□ -0.97
HDAC9-201ENST00000401921 ZFYP08048 801 aaPredicted RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms