RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 CPA1P15085 419 aa10.33□□□□□ -0.76
LINC01139-201ENST00000400946 FOXO4P98177 505 aa10.33□□□□□ -0.76
LINC01139-201ENST00000400946 TFCP2Q12800 502 aa10.33□□□□□ -0.76
LINC01139-201ENST00000400946 TRIM28Q13263 835 aaKnown RBP10.33□□□□□ -0.76
LINC01139-201ENST00000400946 DHX32Q7L7V1 743 aaKnown RBP10.33□□□□□ -0.76
LINC01139-201ENST00000400946 UBE3BQ7Z3V4 1068 aa10.33□□□□□ -0.76
LINC01139-201ENST00000400946 TTC6Q86TZ1 520 aa10.33□□□□□ -0.76
LINC01139-201ENST00000400946 UBE2Q2Q8WVN8 375 aa10.33□□□□□ -0.76
LINC01139-201ENST00000400946 SIL1Q9H173 461 aa10.33□□□□□ -0.76
LINC01139-201ENST00000400946 TSPYL2Q9H2G4 693 aaPredicted RBP10.33□□□□□ -0.76
LINC01139-201ENST00000400946 SPTLC3Q9NUV7 552 aa10.33□□□□□ -0.76
LINC01139-201ENST00000400946 TNS2Q63HR2 1409 aa10.32□□□□□ -0.76
LINC01139-201ENST00000400946 GOLGA6L4A6NEF3 574 aa10.32□□□□□ -0.76
LINC01139-201ENST00000400946 ADAMTS2O95450 1211 aa10.32□□□□□ -0.76
LINC01139-201ENST00000400946 ZFYP08048 801 aaPredicted RBP10.32□□□□□ -0.76
LINC01139-201ENST00000400946 HCLS1P14317 486 aaPredicted RBP10.32□□□□□ -0.76
LINC01139-201ENST00000400946 EVCP57679 992 aa10.32□□□□□ -0.76
LINC01139-201ENST00000400946 ZMYM1Q5SVZ6 1142 aa10.32□□□□□ -0.76
LINC01139-201ENST00000400946 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.32□□□□□ -0.76
LINC01139-201ENST00000400946 ZNF589Q86UQ0 364 aaPredicted RBP10.32□□□□□ -0.76
LINC01139-201ENST00000400946 NECAB1Q8N987 351 aa10.32□□□□□ -0.76
LINC01139-201ENST00000400946 C8orf37Q96NL8 207 aa10.32□□□□□ -0.76
LINC01139-201ENST00000400946 TEX13AQ9BXU3 409 aaPredicted RBP10.32□□□□□ -0.76
LINC01139-201ENST00000400946 SCUBE2Q9NQ36 999 aa10.32□□□□□ -0.76
LINC01139-201ENST00000400946 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.32□□□□□ -0.76
LINC01139-201ENST00000400946 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.32□□□□□ -0.76
LINC01139-201ENST00000400946 ZNF609O15014 1411 aa10.32□□□□□ -0.76
LINC01139-201ENST00000400946 AFF2P51816 1311 aa10.31□□□□□ -0.76
LINC01139-201ENST00000400946 WDR17Q8IZU2 1322 aa10.31□□□□□ -0.76
LINC01139-201ENST00000400946 MYH15Q9Y2K3 1946 aa10.31□□□□□ -0.76
LINC01139-201ENST00000400946 EYA2O00167 538 aa10.31□□□□□ -0.76
LINC01139-201ENST00000400946 LEO1Q8WVC0 666 aaPredicted RBP10.31□□□□□ -0.76
LINC01139-201ENST00000400946 ZNF274Q96GC6 653 aaPredicted RBP10.31□□□□□ -0.76
LINC01139-201ENST00000400946 SPATA32Q96LK8 384 aa10.31□□□□□ -0.76
LINC01139-201ENST00000400946 CLSTN2Q9H4D0 955 aa10.31□□□□□ -0.76
LINC01139-201ENST00000400946 CTNNA3Q9UI47 895 aa10.31□□□□□ -0.76
LINC01139-201ENST00000400946 AKAP2Q9Y2D5 859 aa10.31□□□□□ -0.76
LINC01139-201ENST00000400946 WDR19Q8NEZ3 1342 aa10.31□□□□□ -0.76
LINC01139-201ENST00000400946 KCPQ6ZWJ8 1503 aa10.3□□□□□ -0.76
LINC01139-201ENST00000400946 POTEJP0CG39 1038 aa10.3□□□□□ -0.76
LINC01139-201ENST00000400946 EXOSC10Q01780 885 aaKnown RBP10.3□□□□□ -0.76
LINC01139-201ENST00000400946 RESTQ13127 1097 aa10.3□□□□□ -0.76
LINC01139-201ENST00000400946 LMBR1LQ6UX01 489 aa10.3□□□□□ -0.76
LINC01139-201ENST00000400946 CDC37L1Q7L3B6 337 aa10.3□□□□□ -0.76
LINC01139-201ENST00000400946 ATG9AQ7Z3C6 839 aa10.3□□□□□ -0.76
LINC01139-201ENST00000400946 FNBP4Q8N3X1 1017 aaPredicted RBP10.3□□□□□ -0.76
LINC01139-201ENST00000400946 ZCRB1Q8TBF4 217 aaKnown RBP10.3□□□□□ -0.76
LINC01139-201ENST00000400946 NGLY1Q96IV0 654 aa10.3□□□□□ -0.76
LINC01139-201ENST00000400946 DBNDD2Q9BQY9 259 aa10.3□□□□□ -0.76
LINC01139-201ENST00000400946 PLA2G12BQ9BX93 195 aa10.3□□□□□ -0.76
LINC01139-201ENST00000400946 TNMDQ9H2S6 317 aa10.3□□□□□ -0.76
LINC01139-201ENST00000400946 PAG1Q9NWQ8 432 aa10.3□□□□□ -0.76
LINC01139-201ENST00000400946 LAMA4Q16363 1823 aa10.3□□□□□ -0.76
LINC01139-201ENST00000400946 CYP21A2P08686 494 aa10.29□□□□□ -0.76
LINC01139-201ENST00000400946 GTF2F1P35269 517 aaKnown RBP eCLIP10.29□□□□□ -0.76
LINC01139-201ENST00000400946 NOLC1Q14978 699 aaKnown RBP eCLIP10.29□□□□□ -0.76
LINC01139-201ENST00000400946 FOXD4L6Q3SYB3 417 aaPredicted RBP10.29□□□□□ -0.76
LINC01139-201ENST00000400946 GIMAP6Q6P9H5 292 aa10.29□□□□□ -0.76
LINC01139-201ENST00000400946 FOXD4L3Q6VB84 417 aaPredicted RBP10.29□□□□□ -0.76
LINC01139-201ENST00000400946 Q6ZUG5 572 aa10.29□□□□□ -0.76
LINC01139-201ENST00000400946 PROM2Q8N271 834 aa10.29□□□□□ -0.76
LINC01139-201ENST00000400946 ZNF396Q96N95 335 aaPredicted RBP10.29□□□□□ -0.76
LINC01139-201ENST00000400946 LARP6Q9BRS8 491 aaKnown RBP10.29□□□□□ -0.76
LINC01139-201ENST00000400946 RCOR1Q9UKL0 485 aa10.29□□□□□ -0.76
LINC01139-201ENST00000400946 R3HCC1Q9Y3T6 440 aaKnown RBP10.29□□□□□ -0.76
LINC01139-201ENST00000400946 H3BQV1 296 aa10.28□□□□□ -0.76
LINC01139-201ENST00000400946 RNF113AO15541 343 aaKnown RBP10.28□□□□□ -0.76
LINC01139-201ENST00000400946 CDC25BP30305 580 aa10.28□□□□□ -0.76
LINC01139-201ENST00000400946 TYRO3Q06418 890 aa10.28□□□□□ -0.76
LINC01139-201ENST00000400946 DHX8Q14562 1220 aaKnown RBP10.28□□□□□ -0.76
LINC01139-201ENST00000400946 IFFO2Q5TF58 517 aa10.28□□□□□ -0.76
LINC01139-201ENST00000400946 TDRD7Q8NHU6 1098 aaKnown RBP10.28□□□□□ -0.76
LINC01139-201ENST00000400946 KLHDC4Q8TBB5 520 aa10.28□□□□□ -0.76
LINC01139-201ENST00000400946 CABLES1Q8TDN4 633 aa10.28□□□□□ -0.76
LINC01139-201ENST00000400946 ZNF512BQ96KM6 892 aaPredicted RBP10.28□□□□□ -0.76
LINC01139-201ENST00000400946 ISCA1Q9BUE6 129 aa10.28□□□□□ -0.76
LINC01139-201ENST00000400946 CARD10Q9BWT7 1032 aa10.28□□□□□ -0.76
LINC01139-201ENST00000400946 NBPF26B4DH59 902 aa10.28□□□□□ -0.76
LINC01139-201ENST00000400946 DHX16O60231 1041 aaKnown RBP10.28□□□□□ -0.76
LINC01139-201ENST00000400946 MMRN1Q13201 1228 aa10.28□□□□□ -0.76
LINC01139-201ENST00000400946 NBPF14Q5TI25 921 aa10.28□□□□□ -0.76
LINC01139-201ENST00000400946 NBPF10Q6P3W6 841 aaKnown RBP10.28□□□□□ -0.76
LINC01139-201ENST00000400946 NBPF15Q8N660 670 aa10.28□□□□□ -0.76
LINC01139-201ENST00000400946 MYRIPQ8NFW9 859 aa10.28□□□□□ -0.76
LINC01139-201ENST00000400946 BRF1Q92994 677 aa10.28□□□□□ -0.76
LINC01139-201ENST00000400946 QTRT2Q9H974 415 aaKnown RBP10.28□□□□□ -0.76
LINC01139-201ENST00000400946 MRVI1Q9Y6F6 885 aa10.28□□□□□ -0.76
LINC01139-201ENST00000400946 ABCA3Q99758 1704 aa10.27□□□□□ -0.77
LINC01139-201ENST00000400946 IFIT1P09914 478 aaKnown RBP10.27□□□□□ -0.77
LINC01139-201ENST00000400946 LIG1P18858 919 aa10.27□□□□□ -0.77
LINC01139-201ENST00000400946 RXRBP28702 533 aa10.27□□□□□ -0.77
LINC01139-201ENST00000400946 CCDC158Q5M9N0 1113 aa10.27□□□□□ -0.77
LINC01139-201ENST00000400946 SARM1Q6SZW1 724 aa10.27□□□□□ -0.77
LINC01139-201ENST00000400946 NSUN7Q8NE18 718 aaKnown RBP10.27□□□□□ -0.77
LINC01139-201ENST00000400946 KIAA1524Q8TCG1 905 aa10.27□□□□□ -0.77
LINC01139-201ENST00000400946 DNAJC2Q99543 621 aaKnown RBP10.27□□□□□ -0.77
LINC01139-201ENST00000400946 DACT1Q9NYF0 836 aa10.27□□□□□ -0.77
LINC01139-201ENST00000400946 CEP126Q9P2H0 1117 aa10.27□□□□□ -0.77
LINC01139-201ENST00000400946 USP21Q9UK80 565 aa10.27□□□□□ -0.77
LINC01139-201ENST00000400946 SALL1Q9NSC2 1324 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms