RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 RBM26Q5T8P6 1007 aaKnown RBP20.03■□□□□ 0.8
ATG4B-203ENST00000400772 COA1Q9GZY4 146 aa20.03■□□□□ 0.8
ATG4B-203ENST00000400772 USP44Q9H0E7 712 aa20.03■□□□□ 0.8
ATG4B-203ENST00000400772 PSME4Q14997 1843 aa20.02■□□□□ 0.8
ATG4B-203ENST00000400772 RASSF10A6NK89 507 aa20.02■□□□□ 0.8
ATG4B-203ENST00000400772 VEGFBP49765 207 aa20.02■□□□□ 0.8
ATG4B-203ENST00000400772 ZNF280AP59817 542 aaPredicted RBP20.02■□□□□ 0.8
ATG4B-203ENST00000400772 RABL6Q3YEC7 729 aaPredicted RBP20.02■□□□□ 0.8
ATG4B-203ENST00000400772 BRPF1P55201 1214 aaPredicted RBP20.01■□□□□ 0.79
ATG4B-203ENST00000400772 KIF4BQ2VIQ3 1234 aa20.01■□□□□ 0.79
ATG4B-203ENST00000400772 DACT2Q5SW24 774 aa20.01■□□□□ 0.79
ATG4B-203ENST00000400772 DLK2Q6UY11 383 aa20.01■□□□□ 0.79
ATG4B-203ENST00000400772 LDHAL6AQ6ZMR3 332 aa20.01■□□□□ 0.79
ATG4B-203ENST00000400772 CDC37L1Q7L3B6 337 aa20.01■□□□□ 0.79
ATG4B-203ENST00000400772 ANKRD44Q8N8A2 993 aa20.01■□□□□ 0.79
ATG4B-203ENST00000400772 MXD3Q9BW11 206 aa20.01■□□□□ 0.79
ATG4B-203ENST00000400772 BICC1Q9H694 974 aaKnown RBP20.01■□□□□ 0.79
ATG4B-203ENST00000400772 NOB1Q9ULX3 412 aaKnown RBP20.01■□□□□ 0.79
ATG4B-203ENST00000400772 KCNJ4P48050 445 aa20■□□□□ 0.79
ATG4B-203ENST00000400772 DEFB115Q30KQ5 88 aa20■□□□□ 0.79
ATG4B-203ENST00000400772 C15orf52Q6ZUT6 534 aaKnown RBP20■□□□□ 0.79
ATG4B-203ENST00000400772 USP48Q86UV5 1035 aa20■□□□□ 0.79
ATG4B-203ENST00000400772 TRPM7Q96QT4 1865 aa19.99■□□□□ 0.79
ATG4B-203ENST00000400772 USP17L8P0C7I0 530 aa19.99■□□□□ 0.79
ATG4B-203ENST00000400772 RARSP54136 660 aaKnown RBP19.99■□□□□ 0.79
ATG4B-203ENST00000400772 TAF7LQ5H9L4 462 aa19.99■□□□□ 0.79
ATG4B-203ENST00000400772 STRIP1Q5VSL9 837 aa19.99■□□□□ 0.79
ATG4B-203ENST00000400772 PUS3Q9BZE2 481 aaKnown RBP19.99■□□□□ 0.79
ATG4B-203ENST00000400772 ABT1Q9ULW3 272 aaKnown RBP19.99■□□□□ 0.79
ATG4B-203ENST00000400772 ASTN2O75129 1339 aaPredicted RBP19.99■□□□□ 0.79
ATG4B-203ENST00000400772 ZNF646O15015 1829 aaPredicted RBP19.98■□□□□ 0.79
ATG4B-203ENST00000400772 CELF2O95319 508 aaKnown RBP19.98■□□□□ 0.79
ATG4B-203ENST00000400772 HSPA1AP0DMV8 641 aaKnown RBP19.98■□□□□ 0.79
ATG4B-203ENST00000400772 HSPA1BP0DMV9 641 aaKnown RBP19.98■□□□□ 0.79
ATG4B-203ENST00000400772 CD209Q9NNX6 404 aa19.98■□□□□ 0.79
ATG4B-203ENST00000400772 CNNM1Q9NRU3 951 aa19.98■□□□□ 0.79
ATG4B-203ENST00000400772 A0A1B0GUL6 1792 aa19.98■□□□□ 0.79
ATG4B-203ENST00000400772 POLR2AP24928 1970 aaKnown RBP19.97■□□□□ 0.79
ATG4B-203ENST00000400772 PLIN1O60240 522 aa19.97■□□□□ 0.79
ATG4B-203ENST00000400772 TTLL5Q6EMB2 1281 aa19.97■□□□□ 0.79
ATG4B-203ENST00000400772 MYOZ2Q9NPC6 264 aa19.97■□□□□ 0.79
ATG4B-203ENST00000400772 RIPOR2Q9Y4F9 1068 aa19.97■□□□□ 0.79
ATG4B-203ENST00000400772 TLL2Q9Y6L7 1015 aa19.97■□□□□ 0.79
ATG4B-203ENST00000400772 SCARF1Q14162 830 aa19.96■□□□□ 0.79
ATG4B-203ENST00000400772 KRT26Q7Z3Y9 468 aa19.96■□□□□ 0.79
ATG4B-203ENST00000400772 FBXW7Q969H0 707 aa19.96■□□□□ 0.79
ATG4B-203ENST00000400772 DCPSQ96C86 337 aaKnown RBP19.96■□□□□ 0.79
ATG4B-203ENST00000400772 ADM5C9JUS6 153 aa19.95■□□□□ 0.78
ATG4B-203ENST00000400772 GTF2IP78347 998 aa19.95■□□□□ 0.78
ATG4B-203ENST00000400772 SAPCD2Q86UD0 394 aa19.95■□□□□ 0.78
ATG4B-203ENST00000400772 GGA3Q9NZ52 723 aa19.95■□□□□ 0.78
ATG4B-203ENST00000400772 WDR33Q9C0J8 1336 aaKnown RBP19.95■□□□□ 0.78
ATG4B-203ENST00000400772 IL1R1P14778 569 aa19.94■□□□□ 0.78
ATG4B-203ENST00000400772 LRRC24Q50LG9 513 aa19.94■□□□□ 0.78
ATG4B-203ENST00000400772 KLHDC4Q8TBB5 520 aa19.94■□□□□ 0.78
ATG4B-203ENST00000400772 API5Q9BZZ5 524 aaKnown RBP19.94■□□□□ 0.78
ATG4B-203ENST00000400772 ZNF408Q9H9D4 720 aa19.94■□□□□ 0.78
ATG4B-203ENST00000400772 MYO3BQ8WXR4 1341 aa19.94■□□□□ 0.78
ATG4B-203ENST00000400772 ANGEL2Q5VTE6 544 aaKnown RBP19.93■□□□□ 0.78
ATG4B-203ENST00000400772 RFX5P48382 616 aaPredicted RBP19.92■□□□□ 0.78
ATG4B-203ENST00000400772 HNRNPUQ00839 825 aaKnown RBP eCLIP19.92■□□□□ 0.78
ATG4B-203ENST00000400772 UBE4AQ14139 1066 aa19.92■□□□□ 0.78
ATG4B-203ENST00000400772 CYP4F22Q6NT55 531 aa19.92■□□□□ 0.78
ATG4B-203ENST00000400772 CERS5Q8N5B7 392 aa19.92■□□□□ 0.78
ATG4B-203ENST00000400772 ARHGAP45Q92619 1136 aa19.92■□□□□ 0.78
ATG4B-203ENST00000400772 MROH5Q6ZUA9 1318 aa19.92■□□□□ 0.78
ATG4B-203ENST00000400772 NBPF9Q3BBW0 867 aa19.91■□□□□ 0.78
ATG4B-203ENST00000400772 ZNF804AQ7Z570 1209 aa19.91■□□□□ 0.78
ATG4B-203ENST00000400772 KIAA0825Q8IV33 1275 aa19.91■□□□□ 0.78
ATG4B-203ENST00000400772 CAPNS2Q96L46 248 aa19.91■□□□□ 0.78
ATG4B-203ENST00000400772 BCAR3O75815 825 aa19.9■□□□□ 0.78
ATG4B-203ENST00000400772 COL13A1Q5TAT6 717 aaPredicted RBP19.9■□□□□ 0.78
ATG4B-203ENST00000400772 SULF1Q8IWU6 871 aa19.9■□□□□ 0.78
ATG4B-203ENST00000400772 OGFOD1Q8N543 542 aa19.9■□□□□ 0.78
ATG4B-203ENST00000400772 VGLL2Q8N8G2 317 aa19.9■□□□□ 0.78
ATG4B-203ENST00000400772 HHIPL1Q96JK4 782 aa19.9■□□□□ 0.78
ATG4B-203ENST00000400772 FAM84BQ96KN1 310 aaPredicted RBP19.9■□□□□ 0.78
ATG4B-203ENST00000400772 WBP1LQ9NX94 342 aa19.9■□□□□ 0.78
ATG4B-203ENST00000400772 SCAF8Q9UPN6 1271 aaKnown RBP19.9■□□□□ 0.78
ATG4B-203ENST00000400772 WNT10BO00744 389 aa19.89■□□□□ 0.77
ATG4B-203ENST00000400772 GYG1P46976 350 aa19.89■□□□□ 0.77
ATG4B-203ENST00000400772 MMP14P50281 582 aa19.89■□□□□ 0.77
ATG4B-203ENST00000400772 PAXIP1Q6ZW49 1069 aaPredicted RBP19.89■□□□□ 0.77
ATG4B-203ENST00000400772 TDRD7Q8NHU6 1098 aaKnown RBP19.89■□□□□ 0.77
ATG4B-203ENST00000400772 KIF16BQ96L93 1317 aa19.88■□□□□ 0.77
ATG4B-203ENST00000400772 PITPNM2Q9BZ72 1349 aa19.88■□□□□ 0.77
ATG4B-203ENST00000400772 FOXN1O15353 648 aa19.88■□□□□ 0.77
ATG4B-203ENST00000400772 SASH1O94885 1247 aa19.88■□□□□ 0.77
ATG4B-203ENST00000400772 UBTFL1P0CB47 393 aaPredicted RBP19.88■□□□□ 0.77
ATG4B-203ENST00000400772 ECE1P42892 770 aa19.88■□□□□ 0.77
ATG4B-203ENST00000400772 PTPN12Q05209 780 aaKnown RBP19.88■□□□□ 0.77
ATG4B-203ENST00000400772 METTL24Q5JXM2 366 aa19.88■□□□□ 0.77
ATG4B-203ENST00000400772 INTS3Q68E01 1043 aaKnown RBP19.88■□□□□ 0.77
ATG4B-203ENST00000400772 CDCA5Q96FF9 252 aa19.88■□□□□ 0.77
ATG4B-203ENST00000400772 ZBED3Q96IU2 234 aaPredicted RBP19.88■□□□□ 0.77
ATG4B-203ENST00000400772 JAG2Q9Y219 1238 aa19.88■□□□□ 0.77
ATG4B-203ENST00000400772 PDE8BO95263 885 aa19.87■□□□□ 0.77
ATG4B-203ENST00000400772 HIBADHP31937 336 aaKnown RBP19.87■□□□□ 0.77
ATG4B-203ENST00000400772 FKBP1AP62942 108 aaKnown RBP19.87■□□□□ 0.77
ATG4B-203ENST00000400772 GRM1Q13255 1194 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms