RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 ARHGEF15O94989 841 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 PDGFAP04085 211 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 TARSP26639 723 aaKnown RBP9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 ARHGAP4P98171 946 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 AAMPQ13685 434 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 KRT25Q7Z3Z0 450 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 GALNT6Q8NCL4 622 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 EDARADDQ8WWZ3 215 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 TNFRSF25Q93038 417 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 KRTAP4-6Q9BYQ5 205 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 ZFATQ9P243 1243 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 ANKRD30AQ9BXX3 1397 aa9.27□□□□□ -0.92
CSNK2A1-204ENST00000400227 ARHGEF5Q12774 1597 aa9.27□□□□□ -0.93
CSNK2A1-204ENST00000400227 ADARB2-AS1A8MUL3 147 aa9.27□□□□□ -0.93
CSNK2A1-204ENST00000400227 MAP3K6O95382 1288 aa9.27□□□□□ -0.93
CSNK2A1-204ENST00000400227 RPLP1P05386 114 aaKnown RBP9.27□□□□□ -0.93
CSNK2A1-204ENST00000400227 PCSK2P16519 638 aa9.27□□□□□ -0.93
CSNK2A1-204ENST00000400227 AEBP1Q8IUX7 1158 aa9.27□□□□□ -0.93
CSNK2A1-204ENST00000400227 RARAP10276 462 aa9.26□□□□□ -0.93
CSNK2A1-204ENST00000400227 ENAMQ9NRM1 1142 aa9.26□□□□□ -0.93
CSNK2A1-204ENST00000400227 POLIQ9UNA4 740 aa9.26□□□□□ -0.93
CSNK2A1-204ENST00000400227 CDC42BPBQ9Y5S2 1711 aa9.26□□□□□ -0.93
CSNK2A1-204ENST00000400227 CHD1O14646 1710 aa9.25□□□□□ -0.93
CSNK2A1-204ENST00000400227 BCORL1Q5H9F3 1711 aa9.25□□□□□ -0.93
CSNK2A1-204ENST00000400227 C9orf84Q5VXU9 1444 aa9.25□□□□□ -0.93
CSNK2A1-204ENST00000400227 ANKRD50Q9ULJ7 1429 aa9.25□□□□□ -0.93
CSNK2A1-204ENST00000400227 ELOA3CA0A087WX78 387 aaPredicted RBP9.25□□□□□ -0.93
CSNK2A1-204ENST00000400227 ELOA3DA6NLF2 546 aaPredicted RBP9.25□□□□□ -0.93
CSNK2A1-204ENST00000400227 SHISA8B8ZZ34 492 aa9.25□□□□□ -0.93
CSNK2A1-204ENST00000400227 ELOA3BQ3SY89 546 aa9.25□□□□□ -0.93
CSNK2A1-204ENST00000400227 NLRP13Q86W25 1043 aa9.25□□□□□ -0.93
CSNK2A1-204ENST00000400227 ELOA3Q8NG57 546 aa9.25□□□□□ -0.93
CSNK2A1-204ENST00000400227 CCDC87Q9NVE4 849 aa9.25□□□□□ -0.93
CSNK2A1-204ENST00000400227 PREX2Q70Z35 1606 aa9.24□□□□□ -0.93
CSNK2A1-204ENST00000400227 PLEKHD1A6NEE1 506 aa9.24□□□□□ -0.93
CSNK2A1-204ENST00000400227 GGNBP2Q9H3C7 697 aa9.24□□□□□ -0.93
CSNK2A1-204ENST00000400227 SHROOM2Q13796 1616 aa9.24□□□□□ -0.93
CSNK2A1-204ENST00000400227 UHRF1BP1Q6BDS2 1440 aa9.23□□□□□ -0.93
CSNK2A1-204ENST00000400227 ADH7P40394 386 aa9.23□□□□□ -0.93
CSNK2A1-204ENST00000400227 USP5P45974 858 aa9.23□□□□□ -0.93
CSNK2A1-204ENST00000400227 PDE12Q6L8Q7 609 aaKnown RBP9.23□□□□□ -0.93
CSNK2A1-204ENST00000400227 DHX32Q7L7V1 743 aaKnown RBP9.23□□□□□ -0.93
CSNK2A1-204ENST00000400227 UBE2OQ9C0C9 1292 aaKnown RBP9.23□□□□□ -0.93
CSNK2A1-204ENST00000400227 STK17AQ9UEE5 414 aa9.23□□□□□ -0.93
CSNK2A1-204ENST00000400227 KDM5CP41229 1560 aa9.23□□□□□ -0.93
CSNK2A1-204ENST00000400227 SAMD9LQ8IVG5 1584 aa9.23□□□□□ -0.93
CSNK2A1-204ENST00000400227 PTPRGP23470 1445 aa9.23□□□□□ -0.93
CSNK2A1-204ENST00000400227 KIF7Q2M1P5 1343 aa9.22□□□□□ -0.93
CSNK2A1-204ENST00000400227 FAM181BA6NEQ2 426 aa9.22□□□□□ -0.93
CSNK2A1-204ENST00000400227 XKR5Q6UX68 686 aa9.22□□□□□ -0.93
CSNK2A1-204ENST00000400227 BTBD6Q96KE9 485 aa9.22□□□□□ -0.93
CSNK2A1-204ENST00000400227 TLR7Q9NYK1 1049 aaKnown RBP9.22□□□□□ -0.93
CSNK2A1-204ENST00000400227 BRPF3Q9ULD4 1205 aa9.22□□□□□ -0.93
CSNK2A1-204ENST00000400227 ARHGEF12Q9NZN5 1544 aa9.22□□□□□ -0.93
CSNK2A1-204ENST00000400227 MMP20O60882 483 aa9.21□□□□□ -0.93
CSNK2A1-204ENST00000400227 NEFLP07196 543 aa9.21□□□□□ -0.93
CSNK2A1-204ENST00000400227 ALAS2P22557 587 aa9.21□□□□□ -0.93
CSNK2A1-204ENST00000400227 C8orf34Q49A92 452 aa9.21□□□□□ -0.93
CSNK2A1-204ENST00000400227 CCDC184Q52MB2 194 aa9.21□□□□□ -0.93
CSNK2A1-204ENST00000400227 GJD3Q8N144 294 aa9.21□□□□□ -0.93
CSNK2A1-204ENST00000400227 TTC16Q8NEE8 873 aa9.21□□□□□ -0.93
CSNK2A1-204ENST00000400227 NEDD1Q8NHV4 660 aa9.21□□□□□ -0.93
CSNK2A1-204ENST00000400227 IGFLR1Q9H665 355 aa9.21□□□□□ -0.93
CSNK2A1-204ENST00000400227 PRKRIP1Q9H875 184 aaPredicted RBP9.21□□□□□ -0.93
CSNK2A1-204ENST00000400227 DNAJB12Q9NXW2 375 aaKnown RBP9.21□□□□□ -0.93
CSNK2A1-204ENST00000400227 BIN2Q9UBW5 565 aaPredicted RBP9.21□□□□□ -0.93
CSNK2A1-204ENST00000400227 MAST1Q9Y2H9 1570 aa9.21□□□□□ -0.94
CSNK2A1-204ENST00000400227 NDUFB5O43674 189 aa9.21□□□□□ -0.94
CSNK2A1-204ENST00000400227 HNRNPUQ00839 825 aaKnown RBP eCLIP9.21□□□□□ -0.94
CSNK2A1-204ENST00000400227 EHHADHQ08426 723 aa9.21□□□□□ -0.94
CSNK2A1-204ENST00000400227 TBC1D8BQ0IIM8 1120 aa9.21□□□□□ -0.94
CSNK2A1-204ENST00000400227 PCSK7Q16549 785 aa9.21□□□□□ -0.94
CSNK2A1-204ENST00000400227 CHSY3Q70JA7 882 aa9.21□□□□□ -0.94
CSNK2A1-204ENST00000400227 ZNF438Q7Z4V0 828 aa9.21□□□□□ -0.94
CSNK2A1-204ENST00000400227 TRPM4Q8TD43 1214 aa9.21□□□□□ -0.94
CSNK2A1-204ENST00000400227 ELP3Q9H9T3 547 aa9.21□□□□□ -0.94
CSNK2A1-204ENST00000400227 ADAMTS8Q9UP79 889 aa9.21□□□□□ -0.94
CSNK2A1-204ENST00000400227 RALGAPBQ86X10 1494 aa9.21□□□□□ -0.94
CSNK2A1-204ENST00000400227 A6NHS1 94 aa9.2□□□□□ -0.94
CSNK2A1-204ENST00000400227 PSAPP07602 524 aa9.2□□□□□ -0.94
CSNK2A1-204ENST00000400227 SOX18P35713 384 aa9.2□□□□□ -0.94
CSNK2A1-204ENST00000400227 ABI2Q9NYB9 513 aaPredicted RBP9.2□□□□□ -0.94
CSNK2A1-204ENST00000400227 TMEM63CQ9P1W3 806 aa9.2□□□□□ -0.94
CSNK2A1-204ENST00000400227 SLC6A14Q9UN76 642 aa9.2□□□□□ -0.94
CSNK2A1-204ENST00000400227 NUP155O75694 1391 aa9.19□□□□□ -0.94
CSNK2A1-204ENST00000400227 CCDC141Q6ZP82 1450 aa9.19□□□□□ -0.94
CSNK2A1-204ENST00000400227 ZBTB42B2RXF5 422 aa9.19□□□□□ -0.94
CSNK2A1-204ENST00000400227 HOXD8P13378 290 aaPredicted RBP9.19□□□□□ -0.94
CSNK2A1-204ENST00000400227 AMPD1P23109 780 aa9.19□□□□□ -0.94
CSNK2A1-204ENST00000400227 NRLP54845 237 aa9.19□□□□□ -0.94
CSNK2A1-204ENST00000400227 GPLD1P80108 840 aa9.19□□□□□ -0.94
CSNK2A1-204ENST00000400227 TTC39BQ5VTQ0 682 aaPredicted RBP9.19□□□□□ -0.94
CSNK2A1-204ENST00000400227 OR13H1Q8NG92 308 aa9.19□□□□□ -0.94
CSNK2A1-204ENST00000400227 CITED4Q96RK1 184 aa9.19□□□□□ -0.94
CSNK2A1-204ENST00000400227 DHX29Q7Z478 1369 aaKnown RBP9.19□□□□□ -0.94
CSNK2A1-204ENST00000400227 USP47Q96K76 1375 aa9.19□□□□□ -0.94
CSNK2A1-204ENST00000400227 KIF15Q9NS87 1388 aa9.19□□□□□ -0.94
CSNK2A1-204ENST00000400227 UNC13BO14795 1591 aa9.18□□□□□ -0.94
CSNK2A1-204ENST00000400227 TTC37Q6PGP7 1564 aa9.18□□□□□ -0.94
CSNK2A1-204ENST00000400227 PLAURQ03405 335 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms