RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 GTPBP10A4D1E9 387 aaKnown RBP9.65□□□□□ -0.86
CACNA1C-220ENST00000399655 RMDN2Q96LZ7 410 aa9.65□□□□□ -0.86
CACNA1C-220ENST00000399655 TMOD2Q9NZR1 351 aa9.65□□□□□ -0.86
CACNA1C-220ENST00000399655 KRT4P19013 534 aa9.65□□□□□ -0.86
CACNA1C-220ENST00000399655 PHKBQ93100 1093 aa9.65□□□□□ -0.86
CACNA1C-220ENST00000399655 CALML4Q96GE6 196 aa9.65□□□□□ -0.86
CACNA1C-220ENST00000399655 POLR3CQ9BUI4 534 aaPredicted RBP9.65□□□□□ -0.86
CACNA1C-220ENST00000399655 UBTFL1P0CB47 393 aaPredicted RBP9.65□□□□□ -0.86
CACNA1C-220ENST00000399655 CENPKQ9BS16 269 aa9.65□□□□□ -0.86
CACNA1C-220ENST00000399655 SUFUQ9UMX1 484 aa9.65□□□□□ -0.86
CACNA1C-220ENST00000399655 EEF1DP29692 281 aaKnown RBP9.65□□□□□ -0.86
CACNA1C-220ENST00000399655 NEK4P51957 841 aa9.65□□□□□ -0.86
CACNA1C-220ENST00000399655 PUF60Q9UHX1 559 aaKnown RBP9.65□□□□□ -0.86
CACNA1C-220ENST00000399655 KIF1CO43896 1103 aaKnown RBP9.65□□□□□ -0.86
CACNA1C-220ENST00000399655 LUZP2Q86TE4 346 aa9.65□□□□□ -0.86
CACNA1C-220ENST00000399655 ARHGAP42A6NI28 874 aa9.65□□□□□ -0.87
CACNA1C-220ENST00000399655 HIP1RO75146 1068 aa9.65□□□□□ -0.87
CACNA1C-220ENST00000399655 TNNC2P02585 160 aa9.65□□□□□ -0.87
CACNA1C-220ENST00000399655 SYCP3Q8IZU3 236 aa9.65□□□□□ -0.87
CACNA1C-220ENST00000399655 RPS6KA2Q15349 733 aa9.65□□□□□ -0.87
CACNA1C-220ENST00000399655 TTC4O95801 387 aa9.65□□□□□ -0.87
CACNA1C-220ENST00000399655 PODNQ7Z5L7 613 aa9.65□□□□□ -0.87
CACNA1C-220ENST00000399655 ZBED9Q6R2W3 1325 aa9.65□□□□□ -0.87
CACNA1C-220ENST00000399655 E7EVH7 732 aa9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 SP100P23497 879 aaPredicted RBP9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 MRPL28Q13084 256 aaKnown RBP9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 FKBP5Q13451 457 aaPredicted RBP9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 PRPF38AQ8NAV1 312 aaKnown RBP9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 RRP1P56182 461 aaKnown RBP9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 TNNC1P63316 161 aa9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 PPP1R7Q15435 360 aa9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 CCDC26Q8TAB7 109 aa9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 ZFP91Q96JP5 570 aaPredicted RBP9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 ZEB2O60315 1214 aa9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 FLOT1O75955 427 aa9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 BICDL1Q6ZP65 573 aa9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 RAPGEF4Q8WZA2 1011 aa9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 CCDC78A2IDD5 438 aa9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 SAFB2Q14151 953 aaKnown RBP eCLIP9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 KCNK9Q9NPC2 374 aa9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 AK9Q5TCS8 1911 aa9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 DNA2P51530 1060 aa9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 GDAP1L1Q96MZ0 367 aa9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 UBA5Q9GZZ9 404 aa9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 BAZ1BQ9UIG0 1483 aaKnown RBP9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 ACTN4O43707 911 aaKnown RBP9.64□□□□□ -0.87
CACNA1C-220ENST00000399655 SLC4A1P02730 911 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 HDDC2Q7Z4H3 204 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 NLRP7Q8WX94 980 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 TRIML1Q8N9V2 468 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 CCDC7Q96M83 1385 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 CARSP49589 748 aaKnown RBP9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 GOLGA3Q08378 1498 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 PFDN6O15212 129 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 ARHGAP44Q17R89 818 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 RPAP2Q8IXW5 612 aaPredicted RBP9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 EFHD1Q9BUP0 239 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 TMEM191CA6NGB0 347 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 TMEM191BP0C7N4 346 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 GRAMD4Q6IC98 578 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 SETD5Q9C0A6 1442 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 KRT86O43790 486 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 KRT7P08729 469 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 KCNH8Q96L42 1107 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 GOLGA8CPA6NN73 597 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 TTC39AQ5SRH9 613 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 MBD2Q9UBB5 411 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 ZBTB12Q9Y330 459 aaPredicted RBP9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 ZNF263O14978 683 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 PDE6AP16499 860 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 TMED1Q13445 227 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 TMC2Q8TDI7 906 aa9.63□□□□□ -0.87
CACNA1C-220ENST00000399655 RHOBTB1O94844 696 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 RASIP1Q5U651 963 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 A0A0B4J269 797 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 TUBB3Q13509 450 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 RIC3Q7Z5B4 369 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 PARVBQ9HBI1 364 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 ATP6V0A2Q9Y487 856 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 HYOU1Q9Y4L1 999 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 SLC8A3P57103 927 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 MAP3K10Q02779 954 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 SH2D4AQ9H788 454 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 AKR1B10O60218 316 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 COG3Q96JB2 828 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 BZW1Q7L1Q6 419 aaKnown RBP9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 STAG1Q8WVM7 1258 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 NEUROG2Q9H2A3 272 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 TCP11L1Q9NUJ3 509 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 MYBBP1AQ9BQG0 1328 aaKnown RBP9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 KRT80Q6KB66 452 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 UBE3BQ7Z3V4 1068 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 TRIM42Q8IWZ5 723 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 ST13P50502 369 aaKnown RBP9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 FAM71BQ8TC56 605 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 BASP1P80723 227 aaKnown RBP9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 ZNF569Q5MCW4 686 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 ANKRD20A3Q5VUR7 823 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 RSBN1LQ6PCB5 846 aaPredicted RBP9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 TMEM232C9JQI7 657 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms