RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 QTRT2Q9H974 415 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-216ENST00000399638 ZBED4O75132 1171 aa12.46□□□□□ -0.42
CACNA1C-216ENST00000399638 RAB11FIP3O75154 756 aa12.46□□□□□ -0.42
CACNA1C-216ENST00000399638 CUL4BQ13620 913 aa12.46□□□□□ -0.42
CACNA1C-216ENST00000399638 ZNF772Q68DY9 489 aaPredicted RBP12.46□□□□□ -0.42
CACNA1C-216ENST00000399638 NUP160Q12769 1436 aa12.46□□□□□ -0.42
CACNA1C-216ENST00000399638 GCOM1H8Y6P7 765 aaPredicted RBP12.46□□□□□ -0.42
CACNA1C-216ENST00000399638 MYZAPP0CAP1 466 aa12.46□□□□□ -0.42
CACNA1C-216ENST00000399638 UBA7P41226 1012 aa12.46□□□□□ -0.42
CACNA1C-216ENST00000399638 LRRC27Q9C0I9 530 aa12.46□□□□□ -0.42
CACNA1C-216ENST00000399638 ATF5Q9Y2D1 282 aaPredicted RBP12.46□□□□□ -0.42
CACNA1C-216ENST00000399638 FSD2A1L4K1 749 aa12.45□□□□□ -0.42
CACNA1C-216ENST00000399638 RASA3Q14644 834 aa12.45□□□□□ -0.42
CACNA1C-216ENST00000399638 MICU3Q86XE3 530 aa12.45□□□□□ -0.42
CACNA1C-216ENST00000399638 ANKRD2Q9GZV1 360 aa12.45□□□□□ -0.42
CACNA1C-216ENST00000399638 EXOC1Q9NV70 894 aa12.45□□□□□ -0.42
CACNA1C-216ENST00000399638 CAMSAP2Q08AD1 1489 aa12.45□□□□□ -0.42
CACNA1C-216ENST00000399638 NUP88Q99567 741 aaPredicted RBP12.45□□□□□ -0.42
CACNA1C-216ENST00000399638 CCDC141Q6ZP82 1450 aa12.45□□□□□ -0.42
CACNA1C-216ENST00000399638 ABCC5O15440 1437 aa12.45□□□□□ -0.42
CACNA1C-216ENST00000399638 RPAP2Q8IXW5 612 aaPredicted RBP12.45□□□□□ -0.42
CACNA1C-216ENST00000399638 HACE1Q8IYU2 909 aa12.45□□□□□ -0.42
CACNA1C-216ENST00000399638 ZBED2Q9BTP6 218 aa12.45□□□□□ -0.42
CACNA1C-216ENST00000399638 TAOK3Q9H2K8 898 aa12.45□□□□□ -0.42
CACNA1C-216ENST00000399638 WASLO00401 505 aaPredicted RBP12.45□□□□□ -0.42
CACNA1C-216ENST00000399638 SLC39A6Q13433 755 aa12.45□□□□□ -0.42
CACNA1C-216ENST00000399638 MSANTD4Q8NCY6 345 aa12.45□□□□□ -0.42
CACNA1C-216ENST00000399638 MICAL1Q8TDZ2 1067 aa12.45□□□□□ -0.42
CACNA1C-216ENST00000399638 SMARCA5O60264 1052 aaPredicted RBP12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 ERCC5P28715 1186 aaPredicted RBP12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 MAFGO15525 162 aa12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 ARID4AP29374 1257 aaPredicted RBP12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 MCM9Q9NXL9 1143 aa12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 LRFN2Q9ULH4 789 aa12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 PPME1Q9Y570 386 aa12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 TOPBP1Q92547 1522 aa12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 KIF5CO60282 957 aa12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 C8orf34Q49A92 452 aa12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 CHD1LQ86WJ1 897 aa12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 RRP36Q96EU6 259 aaKnown RBP12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 AZI2Q9H6S1 392 aa12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 CACYBPQ9HB71 228 aaKnown RBP12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 F6X3S4 739 aa12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 CCDC129Q6ZRS4 1044 aa12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 GGA1Q9UJY5 639 aa12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 LCA5Q86VQ0 697 aa12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 CCDC24Q8N4L8 307 aa12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.44□□□□□ -0.42
CACNA1C-216ENST00000399638 CCDC83Q8IWF9 413 aa12.43□□□□□ -0.42
CACNA1C-216ENST00000399638 CCDC63Q8NA47 563 aa12.43□□□□□ -0.42
CACNA1C-216ENST00000399638 FEZ2Q9UHY8 353 aaPredicted RBP12.43□□□□□ -0.42
CACNA1C-216ENST00000399638 PALM3A6NDB9 673 aaPredicted RBP12.43□□□□□ -0.42
CACNA1C-216ENST00000399638 DAPK3O43293 454 aa12.43□□□□□ -0.42
CACNA1C-216ENST00000399638 CRCPO75575 148 aa12.43□□□□□ -0.42
CACNA1C-216ENST00000399638 WTAPQ15007 396 aa12.43□□□□□ -0.42
CACNA1C-216ENST00000399638 TCP10Q12799 353 aa12.43□□□□□ -0.42
CACNA1C-216ENST00000399638 USP48Q86UV5 1035 aa12.43□□□□□ -0.42
CACNA1C-216ENST00000399638 PFDN4Q9NQP4 134 aa12.43□□□□□ -0.42
CACNA1C-216ENST00000399638 UHRF1BP1Q6BDS2 1440 aa12.43□□□□□ -0.42
CACNA1C-216ENST00000399638 TBC1D2Q9BYX2 928 aa12.43□□□□□ -0.42
CACNA1C-216ENST00000399638 SHTN1A0MZ66 631 aa12.43□□□□□ -0.42
CACNA1C-216ENST00000399638 SEPT14Q6ZU15 432 aa12.43□□□□□ -0.42
CACNA1C-216ENST00000399638 CCDC89Q8N998 374 aa12.43□□□□□ -0.42
CACNA1C-216ENST00000399638 ADGRL1O94910 1474 aa12.43□□□□□ -0.42
CACNA1C-216ENST00000399638 METAP2P50579 478 aaKnown RBP eCLIP12.42□□□□□ -0.42
CACNA1C-216ENST00000399638 MAK16Q9BXY0 300 aaKnown RBP12.42□□□□□ -0.42
CACNA1C-216ENST00000399638 CCDC14Q49A88 953 aa12.42□□□□□ -0.42
CACNA1C-216ENST00000399638 CPXCR1Q8N123 301 aa12.42□□□□□ -0.42
CACNA1C-216ENST00000399638 CNNM3Q8NE01 707 aa12.42□□□□□ -0.42
CACNA1C-216ENST00000399638 NSD3Q9BZ95 1437 aa12.42□□□□□ -0.42
CACNA1C-216ENST00000399638 DLGAP5Q15398 846 aa12.42□□□□□ -0.42
CACNA1C-216ENST00000399638 CCT6BQ92526 530 aa12.42□□□□□ -0.42
CACNA1C-216ENST00000399638 TTC12Q9H892 705 aaPredicted RBP12.42□□□□□ -0.42
CACNA1C-216ENST00000399638 NESP48681 1621 aa12.42□□□□□ -0.42
CACNA1C-216ENST00000399638 PANK2Q9BZ23 570 aa12.42□□□□□ -0.42
CACNA1C-216ENST00000399638 SNX21Q969T3 373 aa12.42□□□□□ -0.42
CACNA1C-216ENST00000399638 CHMP2AO43633 222 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 IARSP41252 1262 aaKnown RBP12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 CAMK4Q16566 473 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 GSTA5Q7RTV2 222 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 HELBQ8NG08 1087 aaPredicted RBP12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 DDX39AO00148 427 aaKnown RBP12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 SORBS3O60504 671 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 USO1O60763 962 aaKnown RBP12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 CCDC172P0C7W6 258 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 ANKRD13DQ6ZTN6 518 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 CCDC50Q8IVM0 306 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 FAM114A1Q8IWE2 563 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 CD2APQ9Y5K6 639 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 ABCC11Q96J66 1382 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 SPDYE16A6NNV3 312 aaPredicted RBP12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 KLHL40Q2TBA0 621 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 SPDYE2Q495Y8 402 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 PRIMPOLQ96LW4 560 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 CCDC114Q96M63 670 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 FNDC3AQ9Y2H6 1198 aaKnown RBP12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 ABI1Q8IZP0 508 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 GPCPD1Q9NPB8 672 aa12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 HMGB1P09429 215 aaKnown RBP12.41□□□□□ -0.42
CACNA1C-216ENST00000399638 DNM2P50570 870 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms