RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 TBC1D10BQ4KMP7 808 aaPredicted RBP18.74■□□□□ 0.59
SMIM11A-203ENST00000399299 LDHAL6AQ6ZMR3 332 aa18.74■□□□□ 0.59
SMIM11A-203ENST00000399299 MYO3BQ8WXR4 1341 aa18.74■□□□□ 0.59
SMIM11A-203ENST00000399299 IRS2Q9Y4H2 1338 aa18.74■□□□□ 0.59
SMIM11A-203ENST00000399299 TRAF5O00463 557 aa18.73■□□□□ 0.59
SMIM11A-203ENST00000399299 EGFRP00533 1210 aa18.73■□□□□ 0.59
SMIM11A-203ENST00000399299 STRIP1Q5VSL9 837 aa18.73■□□□□ 0.59
SMIM11A-203ENST00000399299 CDC37L1Q7L3B6 337 aa18.73■□□□□ 0.59
SMIM11A-203ENST00000399299 ZNF594Q96JF6 807 aaPredicted RBP18.73■□□□□ 0.59
SMIM11A-203ENST00000399299 GLIS2Q9BZE0 524 aaPredicted RBP18.73■□□□□ 0.59
SMIM11A-203ENST00000399299 USP44Q9H0E7 712 aa18.73■□□□□ 0.59
SMIM11A-203ENST00000399299 BICC1Q9H694 974 aaKnown RBP18.73■□□□□ 0.59
SMIM11A-203ENST00000399299 POLR2AP24928 1970 aaKnown RBP18.72■□□□□ 0.59
SMIM11A-203ENST00000399299 TAF5LO75529 589 aa18.72■□□□□ 0.59
SMIM11A-203ENST00000399299 KLRK1P26718 216 aa18.72■□□□□ 0.59
SMIM11A-203ENST00000399299 RARSP54136 660 aaKnown RBP18.72■□□□□ 0.59
SMIM11A-203ENST00000399299 FMR1Q06787 632 aaKnown RBP eCLIP18.72■□□□□ 0.59
SMIM11A-203ENST00000399299 KIF4BQ2VIQ3 1234 aa18.72■□□□□ 0.59
SMIM11A-203ENST00000399299 DACT2Q5SW24 774 aa18.72■□□□□ 0.59
SMIM11A-203ENST00000399299 CNNM1Q9NRU3 951 aa18.72■□□□□ 0.59
SMIM11A-203ENST00000399299 KIF16BQ96L93 1317 aa18.72■□□□□ 0.59
SMIM11A-203ENST00000399299 USP17L8P0C7I0 530 aa18.71■□□□□ 0.59
SMIM11A-203ENST00000399299 MMP14P50281 582 aa18.71■□□□□ 0.59
SMIM11A-203ENST00000399299 CST9Q5W186 159 aa18.71■□□□□ 0.59
SMIM11A-203ENST00000399299 ANKRD44Q8N8A2 993 aa18.71■□□□□ 0.59
SMIM11A-203ENST00000399299 HELBQ8NG08 1087 aaPredicted RBP18.71■□□□□ 0.59
SMIM11A-203ENST00000399299 API5Q9BZZ5 524 aaKnown RBP18.71■□□□□ 0.59
SMIM11A-203ENST00000399299 NOB1Q9ULX3 412 aaKnown RBP18.71■□□□□ 0.59
SMIM11A-203ENST00000399299 DEFB115Q30KQ5 88 aa18.7■□□□□ 0.58
SMIM11A-203ENST00000399299 ABT1Q9ULW3 272 aaKnown RBP18.7■□□□□ 0.58
SMIM11A-203ENST00000399299 THSD7BQ9C0I4 1608 aa18.7■□□□□ 0.58
SMIM11A-203ENST00000399299 SNAP23O00161 211 aa18.69■□□□□ 0.58
SMIM11A-203ENST00000399299 VEGFBP49765 207 aa18.69■□□□□ 0.58
SMIM11A-203ENST00000399299 RBM26Q5T8P6 1007 aaKnown RBP18.69■□□□□ 0.58
SMIM11A-203ENST00000399299 ARHGAP45Q92619 1136 aa18.69■□□□□ 0.58
SMIM11A-203ENST00000399299 DCPSQ96C86 337 aaKnown RBP18.69■□□□□ 0.58
SMIM11A-203ENST00000399299 CD209Q9NNX6 404 aa18.69■□□□□ 0.58
SMIM11A-203ENST00000399299 TLL2Q9Y6L7 1015 aa18.69■□□□□ 0.58
SMIM11A-203ENST00000399299 CELF2O95319 508 aaKnown RBP18.68■□□□□ 0.58
SMIM11A-203ENST00000399299 UBE4AQ14139 1066 aa18.68■□□□□ 0.58
SMIM11A-203ENST00000399299 TTLL5Q6EMB2 1281 aa18.68■□□□□ 0.58
SMIM11A-203ENST00000399299 KRT26Q7Z3Y9 468 aa18.68■□□□□ 0.58
SMIM11A-203ENST00000399299 ZNF804AQ7Z570 1209 aa18.68■□□□□ 0.58
SMIM11A-203ENST00000399299 MYOZ2Q9NPC6 264 aa18.68■□□□□ 0.58
SMIM11A-203ENST00000399299 RIPOR2Q9Y4F9 1068 aa18.68■□□□□ 0.58
SMIM11A-203ENST00000399299 MROH5Q6ZUA9 1318 aa18.68■□□□□ 0.58
SMIM11A-203ENST00000399299 HSPA1AP0DMV8 641 aaKnown RBP18.67■□□□□ 0.58
SMIM11A-203ENST00000399299 HSPA1BP0DMV9 641 aaKnown RBP18.67■□□□□ 0.58
SMIM11A-203ENST00000399299 IL1R1P14778 569 aa18.67■□□□□ 0.58
SMIM11A-203ENST00000399299 HNRNPUQ00839 825 aaKnown RBP eCLIP18.67■□□□□ 0.58
SMIM11A-203ENST00000399299 USP48Q86UV5 1035 aa18.67■□□□□ 0.58
SMIM11A-203ENST00000399299 OGFOD1Q8N543 542 aa18.67■□□□□ 0.58
SMIM11A-203ENST00000399299 HHIPL1Q96JK4 782 aa18.67■□□□□ 0.58
SMIM11A-203ENST00000399299 PUS3Q9BZE2 481 aaKnown RBP18.67■□□□□ 0.58
SMIM11A-203ENST00000399299 GGA3Q9NZ52 723 aa18.67■□□□□ 0.58
SMIM11A-203ENST00000399299 PITPNM2Q9BZ72 1349 aa18.67■□□□□ 0.58
SMIM11A-203ENST00000399299 GTF2IP78347 998 aa18.66■□□□□ 0.58
SMIM11A-203ENST00000399299 FBXW7Q969H0 707 aa18.66■□□□□ 0.58
SMIM11A-203ENST00000399299 MXD3Q9BW11 206 aa18.66■□□□□ 0.58
SMIM11A-203ENST00000399299 PLIN1O60240 522 aa18.65■□□□□ 0.58
SMIM11A-203ENST00000399299 UBTFL1P0CB47 393 aaPredicted RBP18.65■□□□□ 0.58
SMIM11A-203ENST00000399299 SCARF1Q14162 830 aa18.65■□□□□ 0.58
SMIM11A-203ENST00000399299 SAPCD2Q86UD0 394 aa18.65■□□□□ 0.58
SMIM11A-203ENST00000399299 SULF1Q8IWU6 871 aa18.65■□□□□ 0.58
SMIM11A-203ENST00000399299 HDAC5Q9UQL6 1122 aa18.65■□□□□ 0.58
SMIM11A-203ENST00000399299 WDR33Q9C0J8 1336 aaKnown RBP18.65■□□□□ 0.58
SMIM11A-203ENST00000399299 ECE1P42892 770 aa18.64■□□□□ 0.57
SMIM11A-203ENST00000399299 FKBP1AP62942 108 aaKnown RBP18.64■□□□□ 0.57
SMIM11A-203ENST00000399299 INTS3Q68E01 1043 aaKnown RBP18.64■□□□□ 0.57
SMIM11A-203ENST00000399299 ASTN2O75129 1339 aaPredicted RBP18.64■□□□□ 0.57
SMIM11A-203ENST00000399299 ARAP2Q8WZ64 1704 aa18.63■□□□□ 0.57
SMIM11A-203ENST00000399299 ADM5C9JUS6 153 aa18.63■□□□□ 0.57
SMIM11A-203ENST00000399299 IPO8O15397 1037 aaKnown RBP18.63■□□□□ 0.57
SMIM11A-203ENST00000399299 LRRC24Q50LG9 513 aa18.63■□□□□ 0.57
SMIM11A-203ENST00000399299 ANGEL2Q5VTE6 544 aaKnown RBP18.63■□□□□ 0.57
SMIM11A-203ENST00000399299 VGLL2Q8N8G2 317 aa18.63■□□□□ 0.57
SMIM11A-203ENST00000399299 CAPNS2Q96L46 248 aa18.63■□□□□ 0.57
SMIM11A-203ENST00000399299 ZNF408Q9H9D4 720 aa18.63■□□□□ 0.57
SMIM11A-203ENST00000399299 HDAC9Q9UKV0 1011 aa18.63■□□□□ 0.57
SMIM11A-203ENST00000399299 RFX5P48382 616 aaPredicted RBP18.62■□□□□ 0.57
SMIM11A-203ENST00000399299 ZBED9Q6R2W3 1325 aa18.62■□□□□ 0.57
SMIM11A-203ENST00000399299 ECM29Q5VYK3 1845 aa18.62■□□□□ 0.57
SMIM11A-203ENST00000399299 FAM205AQ6ZU69 1335 aa18.61■□□□□ 0.57
SMIM11A-203ENST00000399299 WNT10BO00744 389 aa18.61■□□□□ 0.57
SMIM11A-203ENST00000399299 SASH1O94885 1247 aa18.61■□□□□ 0.57
SMIM11A-203ENST00000399299 PDE8BO95263 885 aa18.61■□□□□ 0.57
SMIM11A-203ENST00000399299 NBPF9Q3BBW0 867 aa18.61■□□□□ 0.57
SMIM11A-203ENST00000399299 METTL24Q5JXM2 366 aa18.61■□□□□ 0.57
SMIM11A-203ENST00000399299 CYP4F22Q6NT55 531 aa18.61■□□□□ 0.57
SMIM11A-203ENST00000399299 KIAA0825Q8IV33 1275 aa18.61■□□□□ 0.57
SMIM11A-203ENST00000399299 CERS5Q8N5B7 392 aa18.61■□□□□ 0.57
SMIM11A-203ENST00000399299 TDRD7Q8NHU6 1098 aaKnown RBP18.61■□□□□ 0.57
SMIM11A-203ENST00000399299 FBXO3Q9UK99 471 aa18.61■□□□□ 0.57
SMIM11A-203ENST00000399299 HIBADHP31937 336 aaKnown RBP18.6■□□□□ 0.57
SMIM11A-203ENST00000399299 PTPN12Q05209 780 aaKnown RBP18.6■□□□□ 0.57
SMIM11A-203ENST00000399299 DLK2Q6UY11 383 aa18.6■□□□□ 0.57
SMIM11A-203ENST00000399299 ATF7IPQ6VMQ6 1270 aa18.6■□□□□ 0.57
SMIM11A-203ENST00000399299 PAXIP1Q6ZW49 1069 aaPredicted RBP18.6■□□□□ 0.57
SMIM11A-203ENST00000399299 KLHDC4Q8TBB5 520 aa18.6■□□□□ 0.57
SMIM11A-203ENST00000399299 ZBED3Q96IU2 234 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms