RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 NKX2-3Q8TAU0 364 aa17.11■□□□□ 0.33
CCDC144A-205ENST00000399264 KAT6BQ8WYB5 2073 aa17.11■□□□□ 0.33
CCDC144A-205ENST00000399264 DENND2AQ9ULE3 1009 aa17.11■□□□□ 0.33
CCDC144A-205ENST00000399264 PALLDQ8WX93 1383 aa17.11■□□□□ 0.33
CCDC144A-205ENST00000399264 STRCP1A6NGW2 1772 aa17.11■□□□□ 0.33
CCDC144A-205ENST00000399264 TNS3Q68CZ2 1445 aa17.11■□□□□ 0.33
CCDC144A-205ENST00000399264 RNF113AO15541 343 aaKnown RBP17.11■□□□□ 0.33
CCDC144A-205ENST00000399264 PDIA3P30101 505 aaKnown RBP17.11■□□□□ 0.33
CCDC144A-205ENST00000399264 ZNF165P49910 485 aa17.1■□□□□ 0.33
CCDC144A-205ENST00000399264 HELLSQ9NRZ9 838 aa17.1■□□□□ 0.33
CCDC144A-205ENST00000399264 DDX19AQ9NUU7 478 aaKnown RBP17.1■□□□□ 0.33
CCDC144A-205ENST00000399264 SPTLC3Q9NUV7 552 aa17.1■□□□□ 0.33
CCDC144A-205ENST00000399264 FDPSP14324 419 aaKnown RBP17.1■□□□□ 0.33
CCDC144A-205ENST00000399264 RBM43Q6ZSC3 357 aaKnown RBP17.1■□□□□ 0.33
CCDC144A-205ENST00000399264 C11orf57Q6ZUT1 292 aaPredicted RBP17.1■□□□□ 0.33
CCDC144A-205ENST00000399264 TRIM5Q9C035 493 aa17.1■□□□□ 0.33
CCDC144A-205ENST00000399264 WASHC4Q2M389 1173 aa17.09■□□□□ 0.33
CCDC144A-205ENST00000399264 CCAR1Q8IX12 1150 aaKnown RBP17.09■□□□□ 0.33
CCDC144A-205ENST00000399264 DRC7Q8IY82 874 aa17.09■□□□□ 0.33
CCDC144A-205ENST00000399264 DYNC1I1O14576 645 aa17.09■□□□□ 0.33
CCDC144A-205ENST00000399264 MYRIPQ8NFW9 859 aa17.09■□□□□ 0.33
CCDC144A-205ENST00000399264 XAGE2Q96GT9 111 aa17.09■□□□□ 0.33
CCDC144A-205ENST00000399264 DSCC1Q9BVC3 393 aa17.09■□□□□ 0.33
CCDC144A-205ENST00000399264 ARID5BQ14865 1188 aa17.08■□□□□ 0.33
CCDC144A-205ENST00000399264 CCDC191Q8NCU4 936 aa17.08■□□□□ 0.33
CCDC144A-205ENST00000399264 PUS7LQ9H0K6 701 aaKnown RBP17.08■□□□□ 0.33
CCDC144A-205ENST00000399264 CEP126Q9P2H0 1117 aa17.08■□□□□ 0.32
CCDC144A-205ENST00000399264 GPTP24298 496 aa17.07■□□□□ 0.32
CCDC144A-205ENST00000399264 ZAP70P43403 619 aa17.07■□□□□ 0.32
CCDC144A-205ENST00000399264 SNW1Q13573 536 aaKnown RBP17.07■□□□□ 0.32
CCDC144A-205ENST00000399264 CCDC144BQ3MJ40 725 aa17.07■□□□□ 0.32
CCDC144A-205ENST00000399264 GORABQ5T7V8 394 aa17.07■□□□□ 0.32
CCDC144A-205ENST00000399264 CCDC144CPQ8IYA2 1237 aa17.07■□□□□ 0.32
CCDC144A-205ENST00000399264 ZNF710Q8N1W2 664 aa17.07■□□□□ 0.32
CCDC144A-205ENST00000399264 BCL11BQ9C0K0 894 aaPredicted RBP17.07■□□□□ 0.32
CCDC144A-205ENST00000399264 ASAP1Q9ULH1 1129 aa17.07■□□□□ 0.32
CCDC144A-205ENST00000399264 BRINP3Q76B58 766 aa17.07■□□□□ 0.32
CCDC144A-205ENST00000399264 CADPS2Q86UW7 1296 aa17.07■□□□□ 0.32
CCDC144A-205ENST00000399264 WDR17Q8IZU2 1322 aa17.07■□□□□ 0.32
CCDC144A-205ENST00000399264 PCDH11XQ9BZA7 1347 aa17.07■□□□□ 0.32
CCDC144A-205ENST00000399264 PCDH11YQ9BZA8 1340 aa17.07■□□□□ 0.32
CCDC144A-205ENST00000399264 RFX7Q2KHR2 1363 aa17.07■□□□□ 0.32
CCDC144A-205ENST00000399264 PKD1L3Q7Z443 1732 aa17.07■□□□□ 0.32
CCDC144A-205ENST00000399264 FGAP02671 866 aa17.06■□□□□ 0.32
CCDC144A-205ENST00000399264 POLR3DP05423 398 aaPredicted RBP17.06■□□□□ 0.32
CCDC144A-205ENST00000399264 ZNF75DP51815 510 aa17.06■□□□□ 0.32
CCDC144A-205ENST00000399264 CCDC57Q2TAC2 916 aa17.06■□□□□ 0.32
CCDC144A-205ENST00000399264 AGXT2Q9BYV1 514 aa17.06■□□□□ 0.32
CCDC144A-205ENST00000399264 ZSCAN16Q9H4T2 348 aaPredicted RBP17.06■□□□□ 0.32
CCDC144A-205ENST00000399264 CFAP45Q9UL16 551 aa17.06■□□□□ 0.32
CCDC144A-205ENST00000399264 TJP1Q07157 1748 aa17.06■□□□□ 0.32
CCDC144A-205ENST00000399264 DNAJC10Q8IXB1 793 aa17.06■□□□□ 0.32
CCDC144A-205ENST00000399264 RCOR1Q9UKL0 485 aa17.06■□□□□ 0.32
CCDC144A-205ENST00000399264 PDIA4P13667 645 aaKnown RBP17.06■□□□□ 0.32
CCDC144A-205ENST00000399264 ME1P48163 572 aa17.06■□□□□ 0.32
CCDC144A-205ENST00000399264 TTC39AQ5SRH9 613 aa17.06■□□□□ 0.32
CCDC144A-205ENST00000399264 GPR108Q9NPR9 543 aa17.06■□□□□ 0.32
CCDC144A-205ENST00000399264 SALL1Q9NSC2 1324 aa17.05■□□□□ 0.32
CCDC144A-205ENST00000399264 HMGB1P09429 215 aaKnown RBP17.05■□□□□ 0.32
CCDC144A-205ENST00000399264 HLFQ16534 295 aa17.05■□□□□ 0.32
CCDC144A-205ENST00000399264 PLA2G4DQ86XP0 818 aa17.05■□□□□ 0.32
CCDC144A-205ENST00000399264 TDRD7Q8NHU6 1098 aaKnown RBP17.05■□□□□ 0.32
CCDC144A-205ENST00000399264 LLPHQ9BRT6 129 aaKnown RBP17.05■□□□□ 0.32
CCDC144A-205ENST00000399264 KCPQ6ZWJ8 1503 aa17.04■□□□□ 0.32
CCDC144A-205ENST00000399264 ERVV-2B6SEH9 535 aa17.04■□□□□ 0.32
CCDC144A-205ENST00000399264 TCIRG1Q13488 830 aa17.04■□□□□ 0.32
CCDC144A-205ENST00000399264 IQCB1Q15051 598 aa17.04■□□□□ 0.32
CCDC144A-205ENST00000399264 NAA16Q6N069 864 aaPredicted RBP17.04■□□□□ 0.32
CCDC144A-205ENST00000399264 ISCA1Q9BUE6 129 aa17.04■□□□□ 0.32
CCDC144A-205ENST00000399264 A0A1B0GVL5 298 aa17.04■□□□□ 0.32
CCDC144A-205ENST00000399264 CACTINQ8WUQ7 758 aaKnown RBP17.04■□□□□ 0.32
CCDC144A-205ENST00000399264 CARMIL3Q8ND23 1372 aa17.04■□□□□ 0.32
CCDC144A-205ENST00000399264 IL2RBP14784 551 aa17.03■□□□□ 0.32
CCDC144A-205ENST00000399264 RXRAP19793 462 aa17.03■□□□□ 0.32
CCDC144A-205ENST00000399264 ANTXR2P58335 489 aa17.03■□□□□ 0.32
CCDC144A-205ENST00000399264 FSIP1Q8NA03 581 aa17.03■□□□□ 0.32
CCDC144A-205ENST00000399264 CLIC4Q9Y696 253 aa17.03■□□□□ 0.32
CCDC144A-205ENST00000399264 CPDO75976 1380 aa17.03■□□□□ 0.32
CCDC144A-205ENST00000399264 RIOK3O14730 519 aaKnown RBP17.03■□□□□ 0.32
CCDC144A-205ENST00000399264 INCENPQ9NQS7 918 aa17.03■□□□□ 0.32
CCDC144A-205ENST00000399264 PCDHA7Q9UN72 937 aa17.03■□□□□ 0.32
CCDC144A-205ENST00000399264 NUP188Q5SRE5 1749 aa17.03■□□□□ 0.32
CCDC144A-205ENST00000399264 TAF7LQ5H9L4 462 aa17.02■□□□□ 0.32
CCDC144A-205ENST00000399264 CCDC158Q5M9N0 1113 aa17.02■□□□□ 0.32
CCDC144A-205ENST00000399264 ZSCAN25Q6NSZ9 544 aa17.02■□□□□ 0.32
CCDC144A-205ENST00000399264 ENGASEQ8NFI3 743 aa17.02■□□□□ 0.32
CCDC144A-205ENST00000399264 C16orf45Q96MC5 204 aaPredicted RBP17.02■□□□□ 0.32
CCDC144A-205ENST00000399264 AIFM3Q96NN9 605 aa17.02■□□□□ 0.32
CCDC144A-205ENST00000399264 CLIP2Q9UDT6 1046 aa17.02■□□□□ 0.32
CCDC144A-205ENST00000399264 HPS5Q9UPZ3 1129 aa17.02■□□□□ 0.32
CCDC144A-205ENST00000399264 LAMB4A4D0S4 1761 aa17.02■□□□□ 0.32
CCDC144A-205ENST00000399264 KLF18A0A0U1RQI7 1052 aa17.02■□□□□ 0.32
CCDC144A-205ENST00000399264 SNAP23O00161 211 aa17.02■□□□□ 0.32
CCDC144A-205ENST00000399264 PRC1O43663 620 aa17.02■□□□□ 0.32
CCDC144A-205ENST00000399264 CIAO1O76071 339 aa17.02■□□□□ 0.32
CCDC144A-205ENST00000399264 GOLGA6L6A8MZA4 724 aa17.02■□□□□ 0.31
CCDC144A-205ENST00000399264 HMGN5P82970 282 aaKnown RBP17.02■□□□□ 0.31
CCDC144A-205ENST00000399264 GLIPR1L2Q4G1C9 344 aa17.02■□□□□ 0.31
CCDC144A-205ENST00000399264 ZNF274Q96GC6 653 aaPredicted RBP17.02■□□□□ 0.31
CCDC144A-205ENST00000399264 GREM2Q9H772 168 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms