RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 ZMYM1Q5SVZ6 1142 aa14□□□□□ -0.17
COL25A1-202ENST00000399127 BBXQ8WY36 941 aaPredicted RBP14□□□□□ -0.17
COL25A1-202ENST00000399127 NEK1Q96PY6 1258 aa14□□□□□ -0.17
COL25A1-202ENST00000399127 RIPOR2Q9Y4F9 1068 aa14□□□□□ -0.17
COL25A1-202ENST00000399127 U3KPZ7 1027 aaPredicted RBP14□□□□□ -0.17
COL25A1-202ENST00000399127 RIC1Q4ADV7 1423 aa14□□□□□ -0.17
COL25A1-202ENST00000399127 MAST3O60307 1309 aa14□□□□□ -0.17
COL25A1-202ENST00000399127 M0R2C6 588 aa14□□□□□ -0.17
COL25A1-202ENST00000399127 RNF113AO15541 343 aaKnown RBP14□□□□□ -0.17
COL25A1-202ENST00000399127 GADD45BO75293 160 aaPredicted RBP14□□□□□ -0.17
COL25A1-202ENST00000399127 EIF5P55010 431 aaKnown RBP14□□□□□ -0.17
COL25A1-202ENST00000399127 HELBQ8NG08 1087 aaPredicted RBP14□□□□□ -0.17
COL25A1-202ENST00000399127 CNPY2Q9Y2B0 182 aa14□□□□□ -0.17
COL25A1-202ENST00000399127 VPS37CA5D8V6 355 aaPredicted RBP13.99□□□□□ -0.17
COL25A1-202ENST00000399127 ATRNO75882 1429 aa13.99□□□□□ -0.17
COL25A1-202ENST00000399127 ZAP70P43403 619 aa13.99□□□□□ -0.17
COL25A1-202ENST00000399127 STOX1Q6ZVD7 989 aa13.99□□□□□ -0.17
COL25A1-202ENST00000399127 HELLSQ9NRZ9 838 aa13.99□□□□□ -0.17
COL25A1-202ENST00000399127 TMEM63CQ9P1W3 806 aa13.99□□□□□ -0.17
COL25A1-202ENST00000399127 ERVV-1B6SEH8 477 aa13.99□□□□□ -0.17
COL25A1-202ENST00000399127 WASHC4Q2M389 1173 aa13.99□□□□□ -0.17
COL25A1-202ENST00000399127 TSGA10IPQ3SY00 556 aa13.99□□□□□ -0.17
COL25A1-202ENST00000399127 SUSD4Q5VX71 490 aa13.99□□□□□ -0.17
COL25A1-202ENST00000399127 USP48Q86UV5 1035 aa13.99□□□□□ -0.17
COL25A1-202ENST00000399127 ZNF34Q8IZ26 560 aa13.99□□□□□ -0.17
COL25A1-202ENST00000399127 OSBP2Q969R2 916 aa13.99□□□□□ -0.17
COL25A1-202ENST00000399127 NAP1L2Q9ULW6 460 aaPredicted RBP13.99□□□□□ -0.17
COL25A1-202ENST00000399127 ANKRD36CQ5JPF3 1778 aa13.99□□□□□ -0.17
COL25A1-202ENST00000399127 PDE8AO60658 829 aa13.98□□□□□ -0.17
COL25A1-202ENST00000399127 HSPD1P10809 573 aaKnown RBP13.98□□□□□ -0.17
COL25A1-202ENST00000399127 FBXO3Q9UK99 471 aa13.98□□□□□ -0.17
COL25A1-202ENST00000399127 SNAP23O00161 211 aa13.98□□□□□ -0.17
COL25A1-202ENST00000399127 F13A1P00488 732 aa13.98□□□□□ -0.17
COL25A1-202ENST00000399127 KRT32Q14532 448 aa13.98□□□□□ -0.17
COL25A1-202ENST00000399127 TTLL5Q6EMB2 1281 aa13.98□□□□□ -0.17
COL25A1-202ENST00000399127 Q6ZUG5 572 aa13.98□□□□□ -0.17
COL25A1-202ENST00000399127 LINC00116Q8NCU8 138 aa13.98□□□□□ -0.17
COL25A1-202ENST00000399127 SYCE3A1L190 88 aa13.97□□□□□ -0.17
COL25A1-202ENST00000399127 ANKRD1Q15327 319 aa13.97□□□□□ -0.17
COL25A1-202ENST00000399127 SMIM5Q71RC9 77 aa13.97□□□□□ -0.17
COL25A1-202ENST00000399127 ISY1Q9ULR0 285 aaKnown RBP13.97□□□□□ -0.17
COL25A1-202ENST00000399127 MTMR6Q9Y217 621 aa13.97□□□□□ -0.17
COL25A1-202ENST00000399127 MYH3P11055 1940 aa13.97□□□□□ -0.17
COL25A1-202ENST00000399127 HSP90B1P14625 803 aaKnown RBP13.97□□□□□ -0.17
COL25A1-202ENST00000399127 MCAMP43121 646 aa13.97□□□□□ -0.17
COL25A1-202ENST00000399127 FERMT3Q86UX7 667 aa13.97□□□□□ -0.17
COL25A1-202ENST00000399127 THSD7AQ9UPZ6 1657 aa13.96□□□□□ -0.17
COL25A1-202ENST00000399127 FIBPO43427 364 aa13.96□□□□□ -0.17
COL25A1-202ENST00000399127 LARP1BQ659C4 914 aaKnown RBP13.96□□□□□ -0.17
COL25A1-202ENST00000399127 CHST3Q7LGC8 479 aa13.96□□□□□ -0.17
COL25A1-202ENST00000399127 BRF1Q92994 677 aa13.96□□□□□ -0.17
COL25A1-202ENST00000399127 SEC31BQ9NQW1 1179 aa13.96□□□□□ -0.17
COL25A1-202ENST00000399127 MYH14Q7Z406 1995 aaKnown RBP13.96□□□□□ -0.17
COL25A1-202ENST00000399127 ONECUT3O60422 494 aaPredicted RBP13.96□□□□□ -0.18
COL25A1-202ENST00000399127 GTF2E1P29083 439 aaPredicted RBP13.96□□□□□ -0.18
COL25A1-202ENST00000399127 VGLL2Q8N8G2 317 aa13.96□□□□□ -0.18
COL25A1-202ENST00000399127 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.96□□□□□ -0.18
COL25A1-202ENST00000399127 CAMTA2O94983 1202 aa13.95□□□□□ -0.18
COL25A1-202ENST00000399127 PDE8BO95263 885 aa13.95□□□□□ -0.18
COL25A1-202ENST00000399127 MBD3O95983 291 aa13.95□□□□□ -0.18
COL25A1-202ENST00000399127 ZNF445P59923 1031 aa13.95□□□□□ -0.18
COL25A1-202ENST00000399127 HAND2P61296 217 aa13.95□□□□□ -0.18
COL25A1-202ENST00000399127 DSCC1Q9BVC3 393 aa13.95□□□□□ -0.18
COL25A1-202ENST00000399127 PUS7LQ9H0K6 701 aaKnown RBP13.95□□□□□ -0.18
COL25A1-202ENST00000399127 CCNL1Q9UK58 526 aaPredicted RBP13.95□□□□□ -0.18
COL25A1-202ENST00000399127 NIP7Q9Y221 180 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL25A1-202ENST00000399127 JAK2O60674 1132 aa13.95□□□□□ -0.18
COL25A1-202ENST00000399127 DNM1Q05193 864 aaKnown RBP13.95□□□□□ -0.18
COL25A1-202ENST00000399127 CDC37L1Q7L3B6 337 aa13.95□□□□□ -0.18
COL25A1-202ENST00000399127 E7EWF7 191 aa13.94□□□□□ -0.18
COL25A1-202ENST00000399127 PHKA1P46020 1223 aa13.94□□□□□ -0.18
COL25A1-202ENST00000399127 FAM173BQ6P4H8 233 aa13.94□□□□□ -0.18
COL25A1-202ENST00000399127 UTP14AQ9BVJ6 771 aaKnown RBP13.94□□□□□ -0.18
COL25A1-202ENST00000399127 ALDH8A1Q9H2A2 487 aaPredicted RBP13.94□□□□□ -0.18
COL25A1-202ENST00000399127 PPFIA3O75145 1194 aa13.94□□□□□ -0.18
COL25A1-202ENST00000399127 TPM2P07951 284 aa13.94□□□□□ -0.18
COL25A1-202ENST00000399127 NASPP49321 788 aaPredicted RBP13.94□□□□□ -0.18
COL25A1-202ENST00000399127 FOXP2O15409 715 aa13.93□□□□□ -0.18
COL25A1-202ENST00000399127 IDH1O75874 414 aaKnown RBP13.93□□□□□ -0.18
COL25A1-202ENST00000399127 DDX11Q96FC9 970 aa13.93□□□□□ -0.18
COL25A1-202ENST00000399127 APOBRQ0VD83 1088 aa13.93□□□□□ -0.18
COL25A1-202ENST00000399127 CCDC102BQ68D86 513 aa13.93□□□□□ -0.18
COL25A1-202ENST00000399127 KRT27Q7Z3Y8 459 aa13.93□□□□□ -0.18
COL25A1-202ENST00000399127 GTF3C6Q969F1 213 aa13.93□□□□□ -0.18
COL25A1-202ENST00000399127 RBSNQ9H1K0 784 aa13.93□□□□□ -0.18
COL25A1-202ENST00000399127 SPEF2Q9C093 1822 aa13.92□□□□□ -0.18
COL25A1-202ENST00000399127 SLC9C2Q5TAH2 1124 aa13.92□□□□□ -0.18
COL25A1-202ENST00000399127 DHX32Q7L7V1 743 aaKnown RBP13.92□□□□□ -0.18
COL25A1-202ENST00000399127 MPHOSPH8Q99549 860 aa13.92□□□□□ -0.18
COL25A1-202ENST00000399127 PIH1D3Q9NQM4 214 aaKnown RBP13.92□□□□□ -0.18
COL25A1-202ENST00000399127 ATP6V1DQ9Y5K8 247 aa13.92□□□□□ -0.18
COL25A1-202ENST00000399127 LAMA4Q16363 1823 aa13.92□□□□□ -0.18
COL25A1-202ENST00000399127 LRRFIP1Q32MZ4 808 aaKnown RBP13.92□□□□□ -0.18
COL25A1-202ENST00000399127 EP400Q96L91 3159 aa13.91□□□□□ -0.18
COL25A1-202ENST00000399127 GNPATO15228 680 aa13.91□□□□□ -0.18
COL25A1-202ENST00000399127 GPAA1O43292 621 aa13.91□□□□□ -0.18
COL25A1-202ENST00000399127 FGAP02671 866 aa13.91□□□□□ -0.18
COL25A1-202ENST00000399127 ZFYP08048 801 aaPredicted RBP13.91□□□□□ -0.18
COL25A1-202ENST00000399127 FOSBP53539 338 aa13.91□□□□□ -0.18
COL25A1-202ENST00000399127 SCRN1Q12765 414 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms