RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 NEURL1BA8MQ27 555 aa15.49■□□□□ 0.07
TFF3-202ENST00000398431 TRPA1O75762 1119 aa15.49■□□□□ 0.07
TFF3-202ENST00000398431 DACT2Q5SW24 774 aa15.49■□□□□ 0.07
TFF3-202ENST00000398431 MOB2Q70IA6 237 aa15.49■□□□□ 0.07
TFF3-202ENST00000398431 CCT4P50991 539 aaKnown RBP15.48■□□□□ 0.07
TFF3-202ENST00000398431 NBPF9Q3BBW0 867 aa15.48■□□□□ 0.07
TFF3-202ENST00000398431 PRAMEF18Q5VWM3 479 aa15.48■□□□□ 0.07
TFF3-202ENST00000398431 RASAL3Q86YV0 1011 aa15.48■□□□□ 0.07
TFF3-202ENST00000398431 MED23Q9ULK4 1368 aa15.48■□□□□ 0.07
TFF3-202ENST00000398431 PITPNM2Q9BZ72 1349 aa15.47■□□□□ 0.07
TFF3-202ENST00000398431 AKAP11Q9UKA4 1901 aa15.47■□□□□ 0.07
TFF3-202ENST00000398431 SLC4A2P04920 1241 aa15.47■□□□□ 0.07
TFF3-202ENST00000398431 CASP7P55210 303 aa15.47■□□□□ 0.07
TFF3-202ENST00000398431 CCDC27Q2M243 656 aa15.47■□□□□ 0.07
TFF3-202ENST00000398431 WWC1Q8IX03 1113 aa15.47■□□□□ 0.07
TFF3-202ENST00000398431 ZNF646O15015 1829 aaPredicted RBP15.47■□□□□ 0.07
TFF3-202ENST00000398431 CSF1RP07333 972 aa15.46■□□□□ 0.07
TFF3-202ENST00000398431 FKBP1BP68106 108 aa15.46■□□□□ 0.07
TFF3-202ENST00000398431 TWISTNBQ3B726 338 aaPredicted RBP15.46■□□□□ 0.07
TFF3-202ENST00000398431 PLA2G12BQ9BX93 195 aa15.46■□□□□ 0.07
TFF3-202ENST00000398431 MYH3P11055 1940 aa15.46■□□□□ 0.07
TFF3-202ENST00000398431 UBE2Q2LH0YL09 131 aa15.45■□□□□ 0.06
TFF3-202ENST00000398431 WNT10BO00744 389 aa15.45■□□□□ 0.06
TFF3-202ENST00000398431 KLRK1P26718 216 aa15.45■□□□□ 0.06
TFF3-202ENST00000398431 NEXNQ0ZGT2 675 aa15.45■□□□□ 0.06
TFF3-202ENST00000398431 GCKRQ14397 625 aa15.45■□□□□ 0.06
TFF3-202ENST00000398431 STRIP1Q5VSL9 837 aa15.45■□□□□ 0.06
TFF3-202ENST00000398431 UBE3BQ7Z3V4 1068 aa15.45■□□□□ 0.06
TFF3-202ENST00000398431 STK31Q9BXU1 1019 aa15.45■□□□□ 0.06
TFF3-202ENST00000398431 COA1Q9GZY4 146 aa15.45■□□□□ 0.06
TFF3-202ENST00000398431 LEMD3Q9Y2U8 911 aa15.45■□□□□ 0.06
TFF3-202ENST00000398431 REM2Q8IYK8 340 aaPredicted RBP15.44■□□□□ 0.06
TFF3-202ENST00000398431 SPEF2Q9C093 1822 aa15.44■□□□□ 0.06
TFF3-202ENST00000398431 ITGA6P23229 1130 aa15.43■□□□□ 0.06
TFF3-202ENST00000398431 TTLL5Q6EMB2 1281 aa15.43■□□□□ 0.06
TFF3-202ENST00000398431 ZBED3Q96IU2 234 aaPredicted RBP15.43■□□□□ 0.06
TFF3-202ENST00000398431 PAPPA2Q9BXP8 1791 aa15.43■□□□□ 0.06
TFF3-202ENST00000398431 ZNF804BA4D1E1 1349 aa15.43■□□□□ 0.06
TFF3-202ENST00000398431 VAMP4O75379 141 aa15.42■□□□□ 0.06
TFF3-202ENST00000398431 SLC34A2O95436 690 aa15.42■□□□□ 0.06
TFF3-202ENST00000398431 IGHMBP2P38935 993 aaKnown RBP15.42■□□□□ 0.06
TFF3-202ENST00000398431 FLIIQ13045 1269 aa15.42■□□□□ 0.06
TFF3-202ENST00000398431 IL16Q14005 1332 aa15.42■□□□□ 0.06
TFF3-202ENST00000398431 MYO3BQ8WXR4 1341 aa15.42■□□□□ 0.06
TFF3-202ENST00000398431 IRS2Q9Y4H2 1338 aa15.42■□□□□ 0.06
TFF3-202ENST00000398431 SNAP23O00161 211 aa15.41■□□□□ 0.06
TFF3-202ENST00000398431 TM4SF4P48230 202 aa15.41■□□□□ 0.06
TFF3-202ENST00000398431 NCBP3Q53F19 620 aaKnown RBP15.41■□□□□ 0.06
TFF3-202ENST00000398431 OGFOD1Q8N543 542 aa15.41■□□□□ 0.06
TFF3-202ENST00000398431 DNAAF4Q8WXU2 420 aa15.41■□□□□ 0.06
TFF3-202ENST00000398431 FBXW7Q969H0 707 aa15.41■□□□□ 0.06
TFF3-202ENST00000398431 ANKRD2Q9GZV1 360 aa15.41■□□□□ 0.06
TFF3-202ENST00000398431 SASH1O94885 1247 aa15.4■□□□□ 0.06
TFF3-202ENST00000398431 MMP14P50281 582 aa15.4■□□□□ 0.06
TFF3-202ENST00000398431 GTF2IP78347 998 aa15.4■□□□□ 0.06
TFF3-202ENST00000398431 CHRNDQ07001 517 aa15.4■□□□□ 0.06
TFF3-202ENST00000398431 CTU1Q7Z7A3 348 aaKnown RBP15.4■□□□□ 0.06
TFF3-202ENST00000398431 LINS1Q8NG48 757 aa15.4■□□□□ 0.06
TFF3-202ENST00000398431 CD209Q9NNX6 404 aa15.4■□□□□ 0.06
TFF3-202ENST00000398431 TBC1D8O95759 1140 aa15.39■□□□□ 0.05
TFF3-202ENST00000398431 FOXO4P98177 505 aa15.39■□□□□ 0.05
TFF3-202ENST00000398431 PTPN12Q05209 780 aaKnown RBP15.39■□□□□ 0.05
TFF3-202ENST00000398431 KIAA0825Q8IV33 1275 aa15.39■□□□□ 0.05
TFF3-202ENST00000398431 MPHOSPH8Q99549 860 aa15.39■□□□□ 0.05
TFF3-202ENST00000398431 TAF5LO75529 589 aa15.38■□□□□ 0.05
TFF3-202ENST00000398431 FKBP5Q13451 457 aaPredicted RBP15.38■□□□□ 0.05
TFF3-202ENST00000398431 LDLRAD1Q5T700 205 aa15.38■□□□□ 0.05
TFF3-202ENST00000398431 C15orf52Q6ZUT6 534 aaKnown RBP15.38■□□□□ 0.05
TFF3-202ENST00000398431 CERS5Q8N5B7 392 aa15.38■□□□□ 0.05
TFF3-202ENST00000398431 HELBQ8NG08 1087 aaPredicted RBP15.38■□□□□ 0.05
TFF3-202ENST00000398431 FANCIQ9NVI1 1328 aa15.38■□□□□ 0.05
TFF3-202ENST00000398431 CACNA1FO60840 1977 aa15.37■□□□□ 0.05
TFF3-202ENST00000398431 SOX10P56693 466 aa15.37■□□□□ 0.05
TFF3-202ENST00000398431 TTLL12Q14166 644 aaPredicted RBP15.37■□□□□ 0.05
TFF3-202ENST00000398431 ZNF296Q8WUU4 475 aaPredicted RBP15.37■□□□□ 0.05
TFF3-202ENST00000398431 R3HDMLQ9H3Y0 253 aa15.37■□□□□ 0.05
TFF3-202ENST00000398431 MYH16Q9H6N6 1097 aa15.37■□□□□ 0.05
TFF3-202ENST00000398431 FZD1Q9UP38 647 aa15.37■□□□□ 0.05
TFF3-202ENST00000398431 PCDHAC2Q9Y5I4 1007 aa15.37■□□□□ 0.05
TFF3-202ENST00000398431 TNRC18O15417 2968 aaPredicted RBP15.36■□□□□ 0.05
TFF3-202ENST00000398431 ANKRD18BA2A2Z9 1011 aa15.36■□□□□ 0.05
TFF3-202ENST00000398431 F6X3S4 739 aa15.36■□□□□ 0.05
TFF3-202ENST00000398431 EXOSC9Q06265 439 aaKnown RBP15.36■□□□□ 0.05
TFF3-202ENST00000398431 MKRN3Q13064 507 aaKnown RBP15.36■□□□□ 0.05
TFF3-202ENST00000398431 PRKG1Q13976 671 aa15.36■□□□□ 0.05
TFF3-202ENST00000398431 EPHA10Q5JZY3 1008 aa15.36■□□□□ 0.05
TFF3-202ENST00000398431 BEND3Q5T5X7 828 aa15.36■□□□□ 0.05
TFF3-202ENST00000398431 WDR63Q8IWG1 891 aa15.36■□□□□ 0.05
TFF3-202ENST00000398431 SPINK5Q9NQ38 1064 aaPredicted RBP15.36■□□□□ 0.05
TFF3-202ENST00000398431 HDAC9Q9UKV0 1011 aa15.36■□□□□ 0.05
TFF3-202ENST00000398431 GPR25O00155 361 aa15.35■□□□□ 0.05
TFF3-202ENST00000398431 IL1R1P14778 569 aa15.35■□□□□ 0.05
TFF3-202ENST00000398431 NF2P35240 595 aa15.35■□□□□ 0.05
TFF3-202ENST00000398431 NOM1Q5C9Z4 860 aaKnown RBP15.35■□□□□ 0.05
TFF3-202ENST00000398431 ARMC9Q7Z3E5 817 aa15.35■□□□□ 0.05
TFF3-202ENST00000398431 APOBEC3FQ8IUX4 373 aaKnown RBP15.35■□□□□ 0.05
TFF3-202ENST00000398431 MTMR14Q8NCE2 650 aa15.35■□□□□ 0.05
TFF3-202ENST00000398431 DEFB129Q9H1M3 183 aa15.35■□□□□ 0.05
TFF3-202ENST00000398431 HPS5Q9UPZ3 1129 aa15.35■□□□□ 0.05
TFF3-202ENST00000398431 SALL2Q9Y467 1007 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms