RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 PCGF6Q9BYE7 350 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 UBA5Q9GZZ9 404 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 ZFYVE28Q9HCC9 887 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 ARHGEF10LQ9HCE6 1279 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 TMEM260Q9NX78 707 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 PPP4R2Q9NY27 417 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 SUPT16HQ9Y5B9 1047 aaKnown RBP2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 USP3Q9Y6I4 520 aa2.79□□□□□ -1.96
HMGN2P39-201ENST00000398005 UBAP1LF5GYI3 381 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 ASMTLO95671 621 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 RLBP1P12271 317 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 FSHRP23945 695 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 HIRAP54198 1017 aaPredicted RBP2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 EXOSC10Q01780 885 aaKnown RBP2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 APOBRQ0VD83 1088 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 SAFB2Q14151 953 aaKnown RBP eCLIP2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 FAM50AQ14320 339 aaKnown RBP2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 TCEA2Q15560 299 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 DDR2Q16832 855 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 C21orf62-AS1Q17RA5 79 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 TKFCQ3LXA3 575 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 MTERF2Q49AM1 385 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 C2orf27AQ580R0 203 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 BRDTQ58F21 947 aaPredicted RBP2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 CT47A1Q5JQC4 288 aaPredicted RBP2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 SNAP47Q5SQN1 464 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 PCNX4Q63HM2 1172 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 LARP1BQ659C4 914 aaKnown RBP2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 SPTY2D1Q68D10 685 aaPredicted RBP2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 PPP4R4Q6NUP7 873 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 FBXL19Q6PCT2 694 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 NPAS3Q8IXF0 933 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 CELF2-AS1Q8N7Q2 184 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 ZSCAN1Q8NBB4 408 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 SLC16A10Q8TF71 515 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 ZDHHC1Q8WTX9 485 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 TSR2Q969E8 191 aaKnown RBP2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 NKD1Q969G9 470 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 CNKSR1Q969H4 720 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 XAGE2Q96GT9 111 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 CRBNQ96SW2 442 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 NT5C1AQ9BXI3 368 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 ACTR10Q9NZ32 417 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 UBP1Q9NZI7 540 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 CNTN3Q9P232 1028 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 PFDN2Q9UHV9 154 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 MAPK8IP1Q9UQF2 711 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 FNDC3AQ9Y2H6 1198 aaKnown RBP2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 ATP8A1Q9Y2Q0 1164 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 LEMD3Q9Y2U8 911 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 MAP4K5Q9Y4K4 846 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 COMMD10Q9Y6G5 202 aa2.78□□□□□ -1.96
HMGN2P39-201ENST00000398005 KDM2BQ8NHM5 1336 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 H3BM21 787 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 KIF3BO15066 747 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 CAPN5O15484 640 aaPredicted RBP2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 CAND2O75155 1236 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 FBXO24O75426 580 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 IL2RAP01589 272 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 KRT18P05783 430 aaKnown RBP2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 VARSP26640 1264 aaKnown RBP2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 GTF2E1P29083 439 aaPredicted RBP2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 MCM4P33991 863 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 CDKN1CP49918 316 aaPredicted RBP2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 EIF6P56537 245 aaKnown RBP2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 SQSTM1Q13501 440 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 HDAC1Q13547 482 aaPredicted RBP2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 RASGRF1Q13972 1273 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 UBE4AQ14139 1066 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 SEPT6Q14141 434 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 GRM2Q14416 872 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 BRD3Q15059 726 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 PPP2R5AQ15172 486 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 MAP9Q49MG5 647 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 CCSAPQ6IQ19 270 aaPredicted RBP2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 KRT26Q7Z3Y9 468 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 JAMLQ86YT9 394 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 GALNT12Q8IXK2 581 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 RAVER1Q8IY67 606 aaKnown RBP2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 CMTR1Q8N1G2 835 aaKnown RBP2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 GOLM1Q8NBJ4 401 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 THAP3Q8WTV1 239 aaPredicted RBP2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 CHAC2Q8WUX2 184 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 IRF7Q92985 503 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 EVI5LQ96CN4 794 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 SHDQ96IW2 340 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 ZFP42Q96MM3 310 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 FERD3LQ96RJ6 166 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 MPHOSPH6Q99547 160 aaKnown RBP2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 ESYT1Q9BSJ8 1104 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 RBSNQ9H1K0 784 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 SUV39H2Q9H5I1 410 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 TERF2IPQ9NYB0 399 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 PPT2Q9UMR5 302 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 TLR6Q9Y2C9 796 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 AKAP2Q9Y2D5 859 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 USP20Q9Y2K6 914 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 THRAP3Q9Y2W1 955 aaKnown RBP2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 MSRB2Q9Y3D2 182 aa2.77□□□□□ -1.97
HMGN2P39-201ENST00000398005 CD2APQ9Y5K6 639 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms